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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0664000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:26929770:26932403:1 gene:Os02g0664000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTATHIONE PEROXIDASE 3 description:Similar to Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx). (Os02t0664000-01)
Sequence

ATGCCGTCTCGCACCGCCCCGTTCATCTCTCGCCTCCGGCTCCTCCGAACCGCCGCCGCC
CTCTCCCCGTTCTCGTCCTCCGCGCCGCCGCGGCACAGCCCCCGCATCCTCCGCGCTATC
CCTGTCGGTGCGCCTCACCCGCCGCGCGTCTCCGCAGCCGTCTCGCCGCTGGTCCGTCCG
GTCGCCGCCGGGTTCGCGCTGTTCAGCATGGCCACCGCCGCCTCCTCCGCCGCATCCGTC
CACGACTTCACCGTCAAGGATGCAAGTGGCAAAGATGTGGACCTGAGCACCTTCAAGGGG
AAAGTCCTCCTTATCGTCAATGTTGCATCTCAGTGTGGCTTGACCAATTCCAACTACACG
GAGCTGAGCCAGTTGTATGAGAAGTACAAGGACCAGGGTTTTGAGATCCTTGCTTTCCCA
TGCAACCAGTTTGGTGGACAGGAACCTGGCACTAATGAGGAGATTGTCCAATTTGCTTGC
ACCCGCTTCAAGGCCGAGTATCCAATTTTTGATAAGGTTGATGTTAATGGTGACAACACT
GCACCCATCTACAAGTTTCTGAAGTCCAGCAAAGGTGGTCTTTTCGGTGACAATATCAAA
TGGAACTTCTCCAAGTTCTTGGTCGACAAAGAGGGGCGTGTTGTGGAGCGCTATGCGCCA
ACTACTTCTCCACTCAGCATGGAGAAGGACATCAAGAAGCTGCTTGGAAGTTCTTAA

Peptide Sequence

PEP ID

Os02t0664000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:26929770:26932403:1 gene:Os02g0664000 transcript:Os02t0664000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTATHIONE PEROXIDASE 3 description:Similar to Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx). (Os02t0664000-01)
Sequence

MPSRTAPFISRLRLLRTAAALSPFSSSAPPRHSPRILRAIPVGAPHPPRVSAAVSPLVRP
VAAGFALFSMATAASSAASVHDFTVKDASGKDVDLSTFKGKVLLIVNVASQCGLTNSNYT
ELSQLYEKYKDQGFEILAFPCNQFGGQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDNT
APIYKFLKSSKGGLFGDNIKWNFSKFLVDKEGRVVERYAPTTSPLSMEKDIKKLLGSS

Transcript Sequence

Transcript ID

Os02t0664000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:26929770:26932403:1 gene:Os02g0664000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTATHIONE PEROXIDASE 3 description:Similar to Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx). (Os02t0664000-01)
Sequence

ATGCCGTCTCGCACCGCCCCGTTCATCTCTCGCCTCCGGCTCCTCCGAACCGCCGCCGCC
CTCTCCCCGTTCTCGTCCTCCGCGCCGCCGCGGCACAGCCCCCGCATCCTCCGCGCTATC
CCTGTCGGTGCGCCTCACCCGCCGCGCGTCTCCGCAGCCGTCTCGCCGCTGGTCCGTCCG
GTCGCCGCCGGGTTCGCGCTGTTCAGCATGGCCACCGCCGCCTCCTCCGCCGCATCCGTC
CACGACTTCACCGTCAAGGATGCAAGTGGCAAAGATGTGGACCTGAGCACCTTCAAGGGG
AAAGTCCTCCTTATCGTCAATGTTGCATCTCAGTGTGGCTTGACCAATTCCAACTACACG
GAGCTGAGCCAGTTGTATGAGAAGTACAAGGACCAGGGTTTTGAGATCCTTGCTTTCCCA
TGCAACCAGTTTGGTGGACAGGAACCTGGCACTAATGAGGAGATTGTCCAATTTGCTTGC
ACCCGCTTCAAGGCCGAGTATCCAATTTTTGATAAGGTTGATGTTAATGGTGACAACACT
GCACCCATCTACAAGTTTCTGAAGTCCAGCAAAGGTGGTCTTTTCGGTGACAATATCAAA
TGGAACTTCTCCAAGTTCTTGGTCGACAAAGAGGGGCGTGTTGTGGAGCGCTATGCGCCA
ACTACTTCTCCACTCAGCATGGAGAAGGACATCAAGAAGCTGCTTGGAAGTTCTTAAAAC
CTTACCGCCGGCGCCACCAGATGCACTGCTGCGTTGCATTGAGCACTTGGAACTTCCAAT
AATGTTGTAATAAAACTGTGCTTGGAATTGCTGTATTTTCATTTGCGTAGCCCTGCTGTG
TAATGTATAAAGTATTAACGTGTAATGAAATTGGCTTACTGCATCACTTTGCCCCTTTAT
TGAAATATTATCTCCTGTATCTGTGTTCGTTATTGAGACCTGCGACTGCGATGAGCAAGT
TTTGACGTGTAACGTGTACTCGTTCTATCTGTGC