Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0663100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:26852082:26854948:1 gene:Os02g0663100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hairy meristem 2 description:GRAS transcription factor domain containing protein. (Os02t0663100-01)
Sequence	ATGAGGGCGGCGCTGTTCGGTGCCGAGAGGAGCGGGGTAGTGGACCTCGGCGGCATCGGC GGCGGTAACAGGGGGCTGTTTTGGCCGGCGGGGAAGGGGGGCCTGGTGGTGGTGGAGCCG AGGTCGGTGCTGGACTGCACGCGCAGCCCGAGCCCGCGCAATTCCACCTCGACGCTGTCG TCGTCCCAGGGCGGCGGCGGGGCGGACTCGACCGGTGTGGCGGCGGTTTCGGAGAGCAGC GCCGCCGCCGCCGAAGCCACCAAATGGGGAGCCCCCGGGGAACACGGGGGCGGCGGTGGC GGCGGTGGCGGCGGTGGGAAGGAGGACTGGAGCAGCGGCTGTGAGTTGCCCCCGATACCG GGGACCCTGGATGTGGGGCTCGTCGGAGGAGAGGGCTGGGACACCATGCTCGGCAACGCC GCCGCCGCCGCAGCCGGGCAGGATCAGTCGTTCTTGAACTGGATCATTGGGGCCGCCGGC GACCTGGAGCAGCCCGGGCCGCCGCTTCTTGACAATGCGGGATTCGGGATCCCGGCCGTC GACCCGCTGGGCTTCTCTCTGGACCACTCCCTCAGCGGCGTCGCCTCCGACCTGTCGTCC TCCGGTGCGCACACCGCAACCGGCGGCGCGGGTGGCGGCAAGGCTTCCCTAGGATTCGGT CTCTTCTCGCCGGAAGCCACCTCTCTCGAGCAGCCGCCGCCGCCGATGCTGTTCCACGAA GGTATCGACACGAAGCCCCCTCTTCTGGGCGCGCAGCCGCCGGGCCTCCTCAACCACTAT CACCACCAGCCGCCGAATCCCGCCGCAACCTTCTTCATGCCTCACCCATCCTTCCCCGAA CACAATCACCAGTCGCCACTCCTCCAGCCACCGCCCAAACGCCACCACTCCATGCCTGAT GACATCTACCTCGCCCGTAACCAGCTACCGCCTGCGGCGGCGGCGGCGCAGGGTCTCCCG TTTTCACCACTACATGCCTCGGTTCCGTTCCAGCTCCAGCCTTCGCCGCCACCGATTCGC GGGGCGATGAAGACGACGGCTGCGGAGGCCGCGCAGCAGCAGTTGCTGGACGAACTGGCA GCGGCGGCAAAGGCAACCGAGGCTGGCAATTCCGTCGGCGCGCGCGAGATATTGGCGCGG CTCAATCAACAGCTCCCCCCTCTTGGGAAGCCCTTCCTCCGCTCCGCCTCCTACCTCAGG GAGGCCCTCCTCCTCGCACTCGCTGACAGCCACCATGGCGTCTCCAGCGTCACCACGCCG CTCGACGTTGCCCTCAAGCTCGCGGCCTACAAGTCGTTCTCCGACCTGTCGCCCGTGCTG CAGTTTGCAAACTTCACGGCAACTCAGGCACTTCTTGATGAAATTGGTGGCACCGCAACT TCCTGCATACATGTCATTGACTTCGATCTCGGTGTTGGCGGTCAGTGGGCTTCCTTCTTG CAGGAGCTTGCGCACCGCCGTGCTGCTGGAGGTGTGACCTTGCCATTGTTGAAGCTAACA GCTTTCGTGTCGACTGCTTCCCACCATCCATTGGAGCTGCACCTTACCCAGGATAACCTT TCTCAGTTTGCCGCAGACCTTGGAATTCCTTTTGAGTTCAATGCCGTCAGTCTTGATGCA TTCAATCCTGGGGAGCTTATTTCTTCAACTGGTGATGAAGTTGTGGCTGTTAGCCTCCCT GTTGGTTGCTCCGCTCGTGCACCACCGCTGCCAGCAATCCTTCGTTTGGTGAAGCAGCTT AGTCCGAAGATTGTGGTGGCTATTGACCATGGAGCTGATCGTGCAGACCTTTCATTCTCG CAGCACTTCCTGAATTGTTTCCAGTCTTGCGTGTTCCTCCTTGACTCACTTGATGCTGCT GGTATTGATGCTGATTCTGCCTGCAAGATTGAGAGGTTTCTGATTCAGCCTAGAGTTCAT GATATGGTGCTTGGACGGCACAAGGTACACAAAGCAATAGCATGGAGGAGTGTTTTTGCA GCAGCTGGGTTTAAGCCTGTTCCACCCAGCAACCTTGCCGAGGCACAGGCAGACTGCCTC CTGAAGCGAGTGCAGGTCCGAGGATTCCATGTGGAGAAGTGCGGAGCTGCTCTCACGCTC TACTGGCAGCGTGGTGAGCTTGTCTCCATATCATCATGGCGGTGCTGA

Peptide Sequence

PEP ID	Os02t0663100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:26852082:26854948:1 gene:Os02g0663100 transcript:Os02t0663100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hairy meristem 2 description:GRAS transcription factor domain containing protein. (Os02t0663100-01)
Sequence	MRAALFGAERSGVVDLGGIGGGNRGLFWPAGKGGLVVVEPRSVLDCTRSPSPRNSTSTLS SSQGGGGADSTGVAAVSESSAAAAEATKWGAPGEHGGGGGGGGGGGKEDWSSGCELPPIP GTLDVGLVGGEGWDTMLGNAAAAAAGQDQSFLNWIIGAAGDLEQPGPPLLDNAGFGIPAV DPLGFSLDHSLSGVASDLSSSGAHTATGGAGGGKASLGFGLFSPEATSLEQPPPPMLFHE GIDTKPPLLGAQPPGLLNHYHHQPPNPAATFFMPHPSFPEHNHQSPLLQPPPKRHHSMPD DIYLARNQLPPAAAAAQGLPFSPLHASVPFQLQPSPPPIRGAMKTTAAEAAQQQLLDELA AAAKATEAGNSVGAREILARLNQQLPPLGKPFLRSASYLREALLLALADSHHGVSSVTTP LDVALKLAAYKSFSDLSPVLQFANFTATQALLDEIGGTATSCIHVIDFDLGVGGQWASFL QELAHRRAAGGVTLPLLKLTAFVSTASHHPLELHLTQDNLSQFAADLGIPFEFNAVSLDA FNPGELISSTGDEVVAVSLPVGCSARAPPLPAILRLVKQLSPKIVVAIDHGADRADLSFS QHFLNCFQSCVFLLDSLDAAGIDADSACKIERFLIQPRVHDMVLGRHKVHKAIAWRSVFA AAGFKPVPPSNLAEAQADCLLKRVQVRGFHVEKCGAALTLYWQRGELVSISSWRC

Transcript Sequence

Transcript ID	Os02t0663100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:26852082:26854948:1 gene:Os02g0663100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hairy meristem 2 description:GRAS transcription factor domain containing protein. (Os02t0663100-01)
Sequence	GGAGAGAGAAGAGTCCACCACACAGAGGAGAGGAGAGGAGAGAGAGACCGTAGCAAGAGG AGTAGTAGTAGAGGAGAGCAGAGAGCCGAGGACTTGGCCAGGAGAGAGAAGGGGTAGGGG GAGACCGGGAGAGAGGTTGCAGCAGAGGCAGAGCCAACTGCACAAGGCAAGGGGCACGCA GCCACGCAGTGCTCCTGCTTGCCCTGCCCCTGCCCACCCCCACCTCCTCGCTGTTCTACT GCTGCTCTACTCTGGCTGGCAACGCATCGCGTCGCGCGCCCAAGCAAAGGCTCCATCAAA CACACACCAAGAAAGAAGAAGAAAAAAAAATCCCCCGCCACGCCGGGCTGCTCCAGATCT CTCAGCCGCGCGCGCGATTATGTGGGATTAGGTAGATGAGGGCGGCGCTGTTCGGTGCCG AGAGGAGCGGGGTAGTGGACCTCGGCGGCATCGGCGGCGGTAACAGGGGGCTGTTTTGGC CGGCGGGGAAGGGGGGCCTGGTGGTGGTGGAGCCGAGGTCGGTGCTGGACTGCACGCGCA GCCCGAGCCCGCGCAATTCCACCTCGACGCTGTCGTCGTCCCAGGGCGGCGGCGGGGCGG ACTCGACCGGTGTGGCGGCGGTTTCGGAGAGCAGCGCCGCCGCCGCCGAAGCCACCAAAT GGGGAGCCCCCGGGGAACACGGGGGCGGCGGTGGCGGCGGTGGCGGCGGTGGGAAGGAGG ACTGGAGCAGCGGCTGTGAGTTGCCCCCGATACCGGGGACCCTGGATGTGGGGCTCGTCG GAGGAGAGGGCTGGGACACCATGCTCGGCAACGCCGCCGCCGCCGCAGCCGGGCAGGATC AGTCGTTCTTGAACTGGATCATTGGGGCCGCCGGCGACCTGGAGCAGCCCGGGCCGCCGC TTCTTGACAATGCGGGATTCGGGATCCCGGCCGTCGACCCGCTGGGCTTCTCTCTGGACC ACTCCCTCAGCGGCGTCGCCTCCGACCTGTCGTCCTCCGGTGCGCACACCGCAACCGGCG GCGCGGGTGGCGGCAAGGCTTCCCTAGGATTCGGTCTCTTCTCGCCGGAAGCCACCTCTC TCGAGCAGCCGCCGCCGCCGATGCTGTTCCACGAAGGTATCGACACGAAGCCCCCTCTTC TGGGCGCGCAGCCGCCGGGCCTCCTCAACCACTATCACCACCAGCCGCCGAATCCCGCCG CAACCTTCTTCATGCCTCACCCATCCTTCCCCGAACACAATCACCAGTCGCCACTCCTCC AGCCACCGCCCAAACGCCACCACTCCATGCCTGATGACATCTACCTCGCCCGTAACCAGC TACCGCCTGCGGCGGCGGCGGCGCAGGGTCTCCCGTTTTCACCACTACATGCCTCGGTTC CGTTCCAGCTCCAGCCTTCGCCGCCACCGATTCGCGGGGCGATGAAGACGACGGCTGCGG AGGCCGCGCAGCAGCAGTTGCTGGACGAACTGGCAGCGGCGGCAAAGGCAACCGAGGCTG GCAATTCCGTCGGCGCGCGCGAGATATTGGCGCGGCTCAATCAACAGCTCCCCCCTCTTG GGAAGCCCTTCCTCCGCTCCGCCTCCTACCTCAGGGAGGCCCTCCTCCTCGCACTCGCTG ACAGCCACCATGGCGTCTCCAGCGTCACCACGCCGCTCGACGTTGCCCTCAAGCTCGCGG CCTACAAGTCGTTCTCCGACCTGTCGCCCGTGCTGCAGTTTGCAAACTTCACGGCAACTC AGGCACTTCTTGATGAAATTGGTGGCACCGCAACTTCCTGCATACATGTCATTGACTTCG ATCTCGGTGTTGGCGGTCAGTGGGCTTCCTTCTTGCAGGAGCTTGCGCACCGCCGTGCTG CTGGAGGTGTGACCTTGCCATTGTTGAAGCTAACAGCTTTCGTGTCGACTGCTTCCCACC ATCCATTGGAGCTGCACCTTACCCAGGATAACCTTTCTCAGTTTGCCGCAGACCTTGGAA TTCCTTTTGAGTTCAATGCCGTCAGTCTTGATGCATTCAATCCTGGGGAGCTTATTTCTT CAACTGGTGATGAAGTTGTGGCTGTTAGCCTCCCTGTTGGTTGCTCCGCTCGTGCACCAC CGCTGCCAGCAATCCTTCGTTTGGTGAAGCAGCTTAGTCCGAAGATTGTGGTGGCTATTG ACCATGGAGCTGATCGTGCAGACCTTTCATTCTCGCAGCACTTCCTGAATTGTTTCCAGT CTTGCGTGTTCCTCCTTGACTCACTTGATGCTGCTGGTATTGATGCTGATTCTGCCTGCA AGATTGAGAGGTTTCTGATTCAGCCTAGAGTTCATGATATGGTGCTTGGACGGCACAAGG TACACAAAGCAATAGCATGGAGGAGTGTTTTTGCAGCAGCTGGGTTTAAGCCTGTTCCAC CCAGCAACCTTGCCGAGGCACAGGCAGACTGCCTCCTGAAGCGAGTGCAGGTCCGAGGAT TCCATGTGGAGAAGTGCGGAGCTGCTCTCACGCTCTACTGGCAGCGTGGTGAGCTTGTCT CCATATCATCATGGCGGTGCTGATCAGCCATAAGCTTCACCCCACCAATGTTCCACCAGC GCTTGCAAGCATTGTCAACTCCAGTAATGTGCATTTTGTTTTGCAATTAAATGTTGCAAC GGAAATTGTTGTCTCAAGTTGTTGAACACCTCATATTGCTTTTCATCACAGCTTATTAGC TAGGCCTAGTGGATTTAGCAATATCGGTGTCAATCTCTGTAGTTAATGATGCTGCTTTAG GTTCTTACCATGCTCTGCTCTATTAGCCATTATCATCAAATTCAAGACACTGCTGATGAG TAGAGAGGATAATTTGACCTATCAAATGGTTCTGTGGTACAGAATTG