Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0662700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:26841588:26844306:1 gene:Os02g0662700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW-LIKE 1, hairy meristem 1 description:Similar to Scl1 protein (Fragment). (Os02t0662700-01);Similar to Scl1 protein (Fragment). (Os02t0662700-02)
Sequence	ATGAGGGCGGCGCTGTTCGGTGCCGAGAGGAGCGGGGTAGTGGACCACGGCGGCGGCGAT AAGGAGGAGCTGTTTTGGCCGGCGGGGAAGGGGGGGCTGGTGGTGGTGGAGCCGAGGTCG GTGCTGGACTGCACGCGCAGCCCGAGCCCGCCGTATTCCACGTCGACGCTGTCGTCGTCC CTGGGCGGCGGCTCGGCGGACTCGACCGGTGTGGCGGCGGTTTCGGAGAGCAGCACCGCC GCCGCCGGAGCCACCAAATGGGGAGCCCCAGGCGAGCATGGTGGCGGCGGGAAGGAGGAG TGGGGCGGCGGGTGCGAGTTGCCCCCGATACCTGGAGCACTGGATGTGGGGCTCGTCGGG GGCGAGGGCTGGGACGCCACGGCCACGCTCGGCAACGCAGCCGGGCCGGACCAGTCGTTC TTGAACTGGATCATTGGGGCCGCCGGCGACCTGGAGCAGCCTGGTCCGCCGCTTCCAGTG CTCCAGCAGCCGCTTATTGACAATGCGGGGTTCGGGATCCCGGCCGTGGACACCATGGGC TTCTCTCTGGATCACCCCCTCAGCGGCGTCGCCTCCGACCTCTCGTCCTCCGGTGCGCAC ACTGCCACCGGCGGTGGCGGCAAGGCCTCATTAGGGTTCGGTCTCTTCTCGCCGGAGGCC ACCTCCCTCGAGCAGCCGCCGCCTTCGATGCTGTTTCACGAAGGTATCGACACGAAGCCC CCTCTTCTGGGTGCGCAGCCGCAATTTCTCCTGAACCACTACCAACCCCAGCCACCCAAC CCCGCCGCAGCCTTGTTCATGCCTCTCCCGCCCTTCCCCGAGCACAATCACCAGTCGCCG CATCTCCAGCCACCGCTCAAACGCCACCACGCCATTCCAGATGACCTCTACCTCGCCCGT AACCAGCAGCAGTCATCCGCGGTGGCGCCAGGTCTCGCCTATTCACCACCGCTACATGGC CCGGCTCCGTTCCAGCTCCATCCTTCGCCGCCACCGATTCGCGGGGCAATGAAGTCGACG GCGGCGGAGGCGGCGCAGCAGCAGCTGCTGGACGAGTTGGCAGCGGCGGCAAAGGCAACC GAGGCTGGCAATTCCGTTGGCGCGCGAGAGATATTGGCGCGGCTCAATCAACAGCTTCCC CAACTTGGGAAGCCCTTCCTCCGCTCCGCCTCCTACCTCAAGGAGGCCCTCCTCCTCGCA CTCGCCGACAGCCACCATGGCTCCTCCGGCGTCACCTCGCCGCTCGACGTTGCCCTCAAG CTTGCAGCATACAAGTCTTTCTCTGACCTGTCACCTGTGCTCCAGTTCACTAACTTTACC GCAACACAGGCGCTTCTTGATGAGATTGGTGGCATGGCAACTTCCTGCATCCATGTCATT GACTTTGATCTCGGTGTTGGTGGTCAGTGGGCTTCCTTCTTGCAGGAGCTTGCCCACCGC CGGGGAGCTGGAGGTATGGCCTTGCCGTTGTTGAAGCTCACGGCTTTCATGTCGACTGCT TCTCACCATCCACTGGAGCTGCACCTTACCCAGGATAACCTCTCTCAGTTTGCCGCAGAG CTCAGAATTCCTTTCGAATTCAATGCCGTCAGTCTTGATGCATTCAATCCTGCGGAACTC ATTTCTTCCTCTGGTGATGAAGTTGTTGCTGTTAGCCTCCCTGTTGGCTGCTCTGCTCGT GCACCACCGCTGCCAGCGATTCTTCGGTTGGTGAAACAGCTTTGTCCTAAGGTTGTCGTG GCTATTGATCATGGAGGTGATCGTGCAGACCTTCCATTCTCGCAGCATTTCCTGAATTGT TTCCAGTCCTGTGTGTTCCTCCTTGACTCGCTTGATGCTGCTGGTATTGATGCTGATTCT GCCTGCAAGATCGAGAGGTTCCTAATTCAACCAAGAGTTGAGGATGCAGTGATTGGGCGG CACAAGGCGCAGAAAGCTATAGCATGGAGGAGCGTTTTTGCAGCAACTGGGTTTAAGCCC GTTCAGCTCAGCAACCTCGCCGAGGCACAGGCAGACTGCCTCCTGAAGCGGGTGCAGGTC CGAGGATTCCATGTGGAGAAACGCGGAGCTGCTCTTACGCTCTACTGGCAGCGTGGGGAG CTTGTATCCATATCATCTTGGCGGTGCTGA

Peptide Sequence

PEP ID	Os02t0662700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:26841588:26844306:1 gene:Os02g0662700 transcript:Os02t0662700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW-LIKE 1, hairy meristem 1 description:Similar to Scl1 protein (Fragment). (Os02t0662700-01);Similar to Scl1 protein (Fragment). (Os02t0662700-02)
Sequence	MRAALFGAERSGVVDHGGGDKEELFWPAGKGGLVVVEPRSVLDCTRSPSPPYSTSTLSSS LGGGSADSTGVAAVSESSTAAAGATKWGAPGEHGGGGKEEWGGGCELPPIPGALDVGLVG GEGWDATATLGNAAGPDQSFLNWIIGAAGDLEQPGPPLPVLQQPLIDNAGFGIPAVDTMG FSLDHPLSGVASDLSSSGAHTATGGGGKASLGFGLFSPEATSLEQPPPSMLFHEGIDTKP PLLGAQPQFLLNHYQPQPPNPAAALFMPLPPFPEHNHQSPHLQPPLKRHHAIPDDLYLAR NQQQSSAVAPGLAYSPPLHGPAPFQLHPSPPPIRGAMKSTAAEAAQQQLLDELAAAAKAT EAGNSVGAREILARLNQQLPQLGKPFLRSASYLKEALLLALADSHHGSSGVTSPLDVALK LAAYKSFSDLSPVLQFTNFTATQALLDEIGGMATSCIHVIDFDLGVGGQWASFLQELAHR RGAGGMALPLLKLTAFMSTASHHPLELHLTQDNLSQFAAELRIPFEFNAVSLDAFNPAEL ISSSGDEVVAVSLPVGCSARAPPLPAILRLVKQLCPKVVVAIDHGGDRADLPFSQHFLNC FQSCVFLLDSLDAAGIDADSACKIERFLIQPRVEDAVIGRHKAQKAIAWRSVFAATGFKP VQLSNLAEAQADCLLKRVQVRGFHVEKRGAALTLYWQRGELVSISSWRC

Transcript Sequence

Transcript ID	Os02t0662700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:26841588:26844306:1 gene:Os02g0662700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW-LIKE 1, hairy meristem 1 description:Similar to Scl1 protein (Fragment). (Os02t0662700-01);Similar to Scl1 protein (Fragment). (Os02t0662700-02)
Sequence	AGGTGTCCATAGCAAGCAGAGCAGGAGCAGAGCCAACTGCACAAGGCAAGGCAGGGGGCC TCTCCTCGCTGTTCTACTGCTGCTATACTCTGGCATCGCGTCGCGCGCGCAAGCAAAAGG GTAGTTCCTCAATCAAACGCTCCAAGAGAAATCACCCCGCCACGCCACGCCGCGCCGGGC TGGGCTGCTGCTCCCAGATCTCGCCGAGCGGGGCGCTCGATTATGTGGGATTAGGTAGAT GAGGGCGGCGCTGTTCGGTGCCGAGAGGAGCGGGGTAGTGGACCACGGCGGCGGCGATAA GGAGGAGCTGTTTTGGCCGGCGGGGAAGGGGGGGCTGGTGGTGGTGGAGCCGAGGTCGGT GCTGGACTGCACGCGCAGCCCGAGCCCGCCGTATTCCACGTCGACGCTGTCGTCGTCCCT GGGCGGCGGCTCGGCGGACTCGACCGGTGTGGCGGCGGTTTCGGAGAGCAGCACCGCCGC CGCCGGAGCCACCAAATGGGGAGCCCCAGGCGAGCATGGTGGCGGCGGGAAGGAGGAGTG GGGCGGCGGGTGCGAGTTGCCCCCGATACCTGGAGCACTGGATGTGGGGCTCGTCGGGGG CGAGGGCTGGGACGCCACGGCCACGCTCGGCAACGCAGCCGGGCCGGACCAGTCGTTCTT GAACTGGATCATTGGGGCCGCCGGCGACCTGGAGCAGCCTGGTCCGCCGCTTCCAGTGCT CCAGCAGCCGCTTATTGACAATGCGGGGTTCGGGATCCCGGCCGTGGACACCATGGGCTT CTCTCTGGATCACCCCCTCAGCGGCGTCGCCTCCGACCTCTCGTCCTCCGGTGCGCACAC TGCCACCGGCGGTGGCGGCAAGGCCTCATTAGGGTTCGGTCTCTTCTCGCCGGAGGCCAC CTCCCTCGAGCAGCCGCCGCCTTCGATGCTGTTTCACGAAGGTATCGACACGAAGCCCCC TCTTCTGGGTGCGCAGCCGCAATTTCTCCTGAACCACTACCAACCCCAGCCACCCAACCC CGCCGCAGCCTTGTTCATGCCTCTCCCGCCCTTCCCCGAGCACAATCACCAGTCGCCGCA TCTCCAGCCACCGCTCAAACGCCACCACGCCATTCCAGATGACCTCTACCTCGCCCGTAA CCAGCAGCAGTCATCCGCGGTGGCGCCAGGTCTCGCCTATTCACCACCGCTACATGGCCC GGCTCCGTTCCAGCTCCATCCTTCGCCGCCACCGATTCGCGGGGCAATGAAGTCGACGGC GGCGGAGGCGGCGCAGCAGCAGCTGCTGGACGAGTTGGCAGCGGCGGCAAAGGCAACCGA GGCTGGCAATTCCGTTGGCGCGCGAGAGATATTGGCGCGGCTCAATCAACAGCTTCCCCA ACTTGGGAAGCCCTTCCTCCGCTCCGCCTCCTACCTCAAGGAGGCCCTCCTCCTCGCACT CGCCGACAGCCACCATGGCTCCTCCGGCGTCACCTCGCCGCTCGACGTTGCCCTCAAGCT TGCAGCATACAAGTCTTTCTCTGACCTGTCACCTGTGCTCCAGTTCACTAACTTTACCGC AACACAGGCGCTTCTTGATGAGATTGGTGGCATGGCAACTTCCTGCATCCATGTCATTGA CTTTGATCTCGGTGTTGGTGGTCAGTGGGCTTCCTTCTTGCAGGAGCTTGCCCACCGCCG GGGAGCTGGAGGTATGGCCTTGCCGTTGTTGAAGCTCACGGCTTTCATGTCGACTGCTTC TCACCATCCACTGGAGCTGCACCTTACCCAGGATAACCTCTCTCAGTTTGCCGCAGAGCT CAGAATTCCTTTCGAATTCAATGCCGTCAGTCTTGATGCATTCAATCCTGCGGAACTCAT TTCTTCCTCTGGTGATGAAGTTGTTGCTGTTAGCCTCCCTGTTGGCTGCTCTGCTCGTGC ACCACCGCTGCCAGCGATTCTTCGGTTGGTGAAACAGCTTTGTCCTAAGGTTGTCGTGGC TATTGATCATGGAGGTGATCGTGCAGACCTTCCATTCTCGCAGCATTTCCTGAATTGTTT CCAGTCCTGTGTGTTCCTCCTTGACTCGCTTGATGCTGCTGGTATTGATGCTGATTCTGC CTGCAAGATCGAGAGGTTCCTAATTCAACCAAGAGTTGAGGATGCAGTGATTGGGCGGCA CAAGGCGCAGAAAGCTATAGCATGGAGGAGCGTTTTTGCAGCAACTGGGTTTAAGCCCGT TCAGCTCAGCAACCTCGCCGAGGCACAGGCAGACTGCCTCCTGAAGCGGGTGCAGGTCCG AGGATTCCATGTGGAGAAACGCGGAGCTGCTCTTACGCTCTACTGGCAGCGTGGGGAGCT TGTATCCATATCATCTTGGCGGTGCTGATCAGCCATAAGCTTCACTCCACCAAGGTTCCA CCACCGTTTGCAAGCATCGACCACTCCAGTAATGTCCATTTATTCTTGCAATTAAATGTT GCAAATGAAATTGTTGTCTTGAGCTGTTGAACTCTTCATATTGCTTTTCGTTGCAGCTTA TTAGCTAGCCTAGTGGATTTAGGAATATTGGTGTCAGTCTCTATAGCTAATGATGTTGCT TTAGGTTGTTGCCATGCTCTGCTCAATTAGCCATGATCATCTCATTGGAAACACTGCTTA TGAGTAGAGACTAGAGGGTAATTTAACCTATCAAATGGTTGTGTGGTACAGAATTAATAT TATACTGCTGTTGCTCTGT