Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0662200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:26820434:26823384:1 gene:Os02g0662200 gene_biotype:protein_coding transcript_biotype:protein_coding description:YbaK/aminoacyl-tRNA synthetase associated region domain containing protein. (Os02t0662200-01)
Sequence

ATGGACGCCGCCGCGGCCGATCTCGAGGCGCGGCAGCTGCGGATCCTCCGCCGCGTCGCG
GACCTCGAGCTCGCCGCGCAGCAGCACCGCCTGGGGGCGCTATCTATCTCCGCGGCGCCC
TCGGGGGGCGAGGCGGAGACGGGCGCCACGGAGGCGCGGCTCTCCTCCATCCTGACCGCG
CGCGGCGTGCTCGACTTCACCTTCCGGCGCGTGCCCGCCGACTACTACGACCGCCCTCTC
GAGGAGCGCCGCGACCTCCTCCGCGCAGATTCAGTCAATCAACTCTGCAAGAGCATCGTC
ATGGTGAATACACAAGCTGCTGCAGATGTTGTTGACTGCAGCAATCCAAAGAATTCAAAA
TATTATGTCGTTGTTGTTCAGTATATGGCACGGCTTAATGCAGACAGCATCAAGAACTTC
ATCTATTCCCTAAACGAGAAGCAGATACCCAAGAAGAGATTTAACATGAGGCTGGCACCA
GAAGAGGAGTCACTCAAGCTTACAGGGTTTGTTCACAATGCTGTTACATGCATTGGAATG
GAAACAGACATACCGGTTATCATTGATGAAGCTATTACCAAGTTAGATAAGGATTTCTTC
TGGCTGGGTGGTGGAGAAGTTGACCTCAAGCTTGGGGTGCGGACCTCACAGTTCCTAAAT
GCATTCAAACCATTTGTGGTGAAGTGTAGTTAG

Peptide Sequence

PEP ID

Os02t0662200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:26820434:26823384:1 gene:Os02g0662200 transcript:Os02t0662200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:YbaK/aminoacyl-tRNA synthetase associated region domain containing protein. (Os02t0662200-01)
Sequence

MDAAAADLEARQLRILRRVADLELAAQQHRLGALSISAAPSGGEAETGATEARLSSILTA
RGVLDFTFRRVPADYYDRPLEERRDLLRADSVNQLCKSIVMVNTQAAADVVDCSNPKNSK
YYVVVVQYMARLNADSIKNFIYSLNEKQIPKKRFNMRLAPEEESLKLTGFVHNAVTCIGM
ETDIPVIIDEAITKLDKDFFWLGGGEVDLKLGVRTSQFLNAFKPFVVKCS

Transcript Sequence

Transcript ID

Os02t0662200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:26820434:26823384:1 gene:Os02g0662200 gene_biotype:protein_coding transcript_biotype:protein_coding description:YbaK/aminoacyl-tRNA synthetase associated region domain containing protein. (Os02t0662200-01)
Sequence

AGACAACGGCGACCATGGACGCCGCCGCGGCCGATCTCGAGGCGCGGCAGCTGCGGATCC
TCCGCCGCGTCGCGGACCTCGAGCTCGCCGCGCAGCAGCACCGCCTGGGGGCGCTATCTA
TCTCCGCGGCGCCCTCGGGGGGCGAGGCGGAGACGGGCGCCACGGAGGCGCGGCTCTCCT
CCATCCTGACCGCGCGCGGCGTGCTCGACTTCACCTTCCGGCGCGTGCCCGCCGACTACT
ACGACCGCCCTCTCGAGGAGCGCCGCGACCTCCTCCGCGCAGATTCAGTCAATCAACTCT
GCAAGAGCATCGTCATGGTGAATACACAAGCTGCTGCAGATGTTGTTGACTGCAGCAATC
CAAAGAATTCAAAATATTATGTCGTTGTTGTTCAGTATATGGCACGGCTTAATGCAGACA
GCATCAAGAACTTCATCTATTCCCTAAACGAGAAGCAGATACCCAAGAAGAGATTTAACA
TGAGGCTGGCACCAGAAGAGGAGTCACTCAAGCTTACAGGGTTTGTTCACAATGCTGTTA
CATGCATTGGAATGGAAACAGACATACCGGTTATCATTGATGAAGCTATTACCAAGTTAG
ATAAGGATTTCTTCTGGCTGGGTGGTGGAGAAGTTGACCTCAAGCTTGGGGTGCGGACCT
CACAGTTCCTAAATGCATTCAAACCATTTGTGGTGAAGTGTAGTTAGTGATAACTGTACA
ACGGAAGAGAAACTTTGAATCCATGTGGTTTTACCATCTTGATGAACACATGAGACATCG
CCAGGGATGTAAACCAATAGGTTTTTGCTTGGATCTGGGGTTGGGATGTCTGTCTTTTTT
AGAGCAGGCGTTTCTGTTCCAGTTGCACTTCTCGCATTAGTTACACTATTTTGGTAAGAT
TGATGCAGCAAAGGGGGCATTCTTGGGAGAATTGAGATAATTGGCACAAGTGGGCATGTA
CTAAAAACCTTTGTAGTTCGTGCCTTCAATATACTAGGATTTACTCTC