Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0661900-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:26799907:26802318:1 gene:Os02g0661900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0143N19.13 protein. (Os02t0661900-01);Similar to Vesicle-associated membrane protein-associated protein B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C) (VAP-B/VAP-C). Splice isoform 2. (Os02t0661900-02)
Sequence	ATGAGTAACACCCTGCTTCGAATCTACCCTTCCGAGCTGAAGATACCCTTCGAGCTCAAG AGGCAGAATTCGGGGATCCTGGAGCTCACGAATAAGACCGATCATCATGTAGCCTTCAAG GTGAAAACGACGAACCCTAGGAAGTACTCGGTGAGACCAACCACCGGAATCGTTCTGCCC AGAGGGTCTTGCGGAATCACAATATCTATGCAACCGCCGAAAGAGATCCCTACGGATTAT AACTGCAAGGACAAGTTTCTCATCCAAAGCGTCGTGGTAGAGGATGGCACAACGCAGAAG GACATTCACAGTGACATGTAA

Peptide Sequence

PEP ID	Os02t0661900-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:26799907:26802318:1 gene:Os02g0661900 transcript:Os02t0661900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0143N19.13 protein. (Os02t0661900-01);Similar to Vesicle-associated membrane protein-associated protein B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C) (VAP-B/VAP-C). Splice isoform 2. (Os02t0661900-02)
Sequence	MSNTLLRIYPSELKIPFELKRQNSGILELTNKTDHHVAFKVKTTNPRKYSVRPTTGIVLP RGSCGITISMQPPKEIPTDYNCKDKFLIQSVVVEDGTTQKDIHSDM

Transcript Sequence

Transcript ID	Os02t0661900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:26799907:26802318:1 gene:Os02g0661900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0143N19.13 protein. (Os02t0661900-01);Similar to Vesicle-associated membrane protein-associated protein B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C) (VAP-B/VAP-C). Splice isoform 2. (Os02t0661900-02)
Sequence	GTGTTTGCTTGTCGTTGATGCTTTGCTTCCTGGAGGAGGAAACGCCCGCACACGCCGCCG ACCACCTCTCCGTTTCCTTGGATCTTTCAGCTTCCTGTTCCTCACGAGATCGAGAAGGGG GGAAAAAGAAAACGTCGGTTTTTAGTCTCGTTTGCCTCGATCCTCTCGTTCTTGGTTGGT CGGCGCCATGAGTAACACCCTGCTTCGAATCTACCCTTCCGAGCTGAAGATACCCTTCGA GCTCAAGAGGCAGAATTCGGGGATCCTGGAGCTCACGAATAAGACCGATCATCATGTAGC CTTCAAGGTGAAAACGACGAACCCTAGGAAGTACTCGGTGAGACCAACCACCGGAATCGT TCTGCCCAGAGGGTCTTGCGGAATCACAATATCTATGCAACCGCCGAAAGAGATCCCTAC GGATTATAACTGCAAGGACAAGTTTCTCATCCAAAGCGTCGTGGTAGAGGATGGCACAAC GCAGAAGGACATTCACAGTGACATGTAAAGAGGCAGGCAAGGTGGTCGAGGAGTTCAAGC TGAGGGTGGTCTACATCCCTGCCAATCCTCCCTCCCCTGTGCCAGAGGAAGAAGAGGATG AGATTGATTCCCTTGATTCAGATGTGGACCATGAAGTGCAAATGCCATCTACGTTCGATG CTGCATCAAGGAAGGGATATACATCTGGATCGCAAGCTTCACATGACGAGGATCTTCTTA AGAAGAAAAGGTCATCATCCGATGGGGGTTTCACAGCTCTGTTTGTGCCTTTTGTCTTTG CGTTCTTCGTCTTCATTGGATACTTAATGGCGGGAAGCAATGTTTAGCCAGAATAGCTGC AAAACATACGCATCGTTTTGCAGAATTTTGTCCCTCTGGCTGATCAATTCTTTCTGTTTC TCTTGGTAGAAATATATTTCTTCATTATAGGTGGTTGTCTTCCGTTCTTGTGAAGTATAA TATACCTCTTAAAGAATGGGAGAGAACCATTCATTGTAGATAGACAAATAGGCGTTCTAT CTCTGAATTGTTCATATATAATAAACCTCTGGTTCATTATACACACACGTTTGCTTGTAA ATGTGGTTGAGTGTAAATTTGACCTGCAGTATGGTCCTGGGTGAGTTCCAGAATCCTTTC ACAGAGT