Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0661000-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:26762824:26766482:-1 gene:Os02g0661000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to peroxisomal biogenesis factor 19. (Os02t0661000-00)
Sequence

ATGGCCTCCTCCAACCCCGGCGCCGGCGACGAGCTCCTCGACGAGCTCCTCGACAGCGCC
CTCGACGACTTCACCAGCCTCGACCTCTCCGCCGCCCCCAAAAGCGGCGGGGAGGCCTCG
GCGGCGTCGTCGTCGTCATCGGGGTCGGGGGACGCGAAGCCGGTGAAGGGGCTGGGGCTG
GGGCTGGGGCTGCCGGACCCCAGGGCGCCGAGGCGGCGGGCGGCGAAGCAGCCCACTGCC
GCGCCGCCGCCGCTGCCGCCGAGGGGCGCGTACGCGTCGGAGGCGCTCGAGAAGCTGACG
CGCGAGACGCGGGAGGCGGTGCGCGGGCTCGAGACGGCCACCGGGGCCATAGCGGGGCTG
GATGACGATGCGATGATGGAGGAGTTCGTTAAGCAGTTCGAGGAGTTCGCCGGCGCGCAG
GATATGGACTCCATTGTTGAAACAATGATGCAACAACTTCTATCCAAGGAGATTCTTCAT
GAGCCGATGAAGGACATTGTGGAAAAATACCCAAAATGGCTCGAGGAAAATAAAAGCAAA
ATAAGCAAAGAAGAATATGAGCGTTACAACAACCAGCTTGAACTCATGATGAAGCTTAAT
GAGGTCTACGAAAAGGAGCCGGAAAACATGGCAAAGATTTTTGAGATCATGCAAAACATG
CAAGAATGTGGTCAACCCCCCAGTGATCTTGTTCAAGACATTGCTCCAGATCTTGATCTG
AGCAAGTTGGGACAACTGTCTCCGGAGATGCTTGAATCAGCACCAAATTGCTGTGTAATG
TGA

Peptide Sequence

PEP ID

Os02t0661000-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:26762824:26766482:-1 gene:Os02g0661000 transcript:Os02t0661000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to peroxisomal biogenesis factor 19. (Os02t0661000-00)
Sequence

MASSNPGAGDELLDELLDSALDDFTSLDLSAAPKSGGEASAASSSSSGSGDAKPVKGLGL
GLGLPDPRAPRRRAAKQPTAAPPPLPPRGAYASEALEKLTRETREAVRGLETATGAIAGL
DDDAMMEEFVKQFEEFAGAQDMDSIVETMMQQLLSKEILHEPMKDIVEKYPKWLEENKSK
ISKEEYERYNNQLELMMKLNEVYEKEPENMAKIFEIMQNMQECGQPPSDLVQDIAPDLDL
SKLGQLSPEMLESAPNCCVM

Transcript Sequence

Transcript ID

Os02t0661000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:26762824:26766482:-1 gene:Os02g0661000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to peroxisomal biogenesis factor 19. (Os02t0661000-00)
Sequence

CGGCGCTTCGCTTCCTTTCTGTCGTGGTGTCCTCGACGATCCCCCCCCCCCCCCCCCCCA
AGACGCGCCCCCGATTACTCGCACGACCCGGCGACCACTCCTCCCCCACCACGCCGCGGC
TTCCGCCCCCCCTCCTCCCGATGGCCTCCTCCAACCCCGGCGCCGGCGACGAGCTCCTCG
ACGAGCTCCTCGACAGCGCCCTCGACGACTTCACCAGCCTCGACCTCTCCGCCGCCCCCA
AAAGCGGCGGGGAGGCCTCGGCGGCGTCGTCGTCGTCATCGGGGTCGGGGGACGCGAAGC
CGGTGAAGGGGCTGGGGCTGGGGCTGGGGCTGCCGGACCCCAGGGCGCCGAGGCGGCGGG
CGGCGAAGCAGCCCACTGCCGCGCCGCCGCCGCTGCCGCCGAGGGGCGCGTACGCGTCGG
AGGCGCTCGAGAAGCTGACGCGCGAGACGCGGGAGGCGGTGCGCGGGCTCGAGACGGCCA
CCGGGGCCATAGCGGGGCTGGATGACGATGCGATGATGGAGGAGTTCGTTAAGCAGTTCG
AGGAGTTCGCCGGCGCGCAGGATATGGACTCCATTGTTGAAACAATGATGCAACAACTTC
TATCCAAGGAGATTCTTCATGAGCCGATGAAGGACATTGTGGAAAAATACCCAAAATGGC
TCGAGGAAAATAAAAGCAAAATAAGCAAAGAAGAATATGAGCGTTACAACAACCAGCTTG
AACTCATGATGAAGCTTAATGAGGTCTACGAAAAGGAGCCGGAAAACATGGCAAAGATTT
TTGAGATCATGCAAAACATGCAAGAATGTGGTCAACCCCCCAGTGATCTTGTTCAAGACA
TTGCTCCAGATCTTGATCTGAGCAAGTTGGGACAACTGTCTCCGGAGATGCTTGAATCAG
CACCAAATTGCTGTGTAATGTGATGAGTAAAACATTCCGTTATGGATTATGAAGTAGCTA
CCTTATCTCTACCCTTTCCCTAAAGTTACTTTCATATGGATCAATTGTAAAGCTTCACAG
ATACATATGAACTCAATGTTTTCTTATTCTTTAGCGAAAGATACATTTGTTCGAATTGAT
GTACTGTGAAAGGGAAGAAAAATATATCCGTTTGCCTTGTGCGAGGTGTGCAATGTGCAA
TCTTGAATGCACAAGTTATGTCGGAGGCAACTCTTAACAAG