Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0659500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:26689426:26690900:1 gene:Os02g0659500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os02t0659500-01)
Sequence	ATGGCGAAGAACGCATGCAAGCTCTGCTACCGCCGCTTCGCTAGCCCACGCGCCCTCGCG GGGCACATGCGGTCTCACTCTGTGGCGGCCGCCAACGCAGCCGCGGCTGCGGCGGCGGCC GCAGCCGCGAAGCTGCAGATCTCATCGGCGTCGTCCGCGTCGACGTCGTTCACCGCGGCC GATGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGACGTGGGATTCAAGAAGCCCCTTTCC ATCTACGCGCTCCGGGAGAATCCCAAGCGCAGCCTCCGCGTCTCCGAGTACGCGTTCTCC GACCGCGAGAGCGAGGCCGAGTCCACCCCGACGCCCGCAGCCAAGGGCTTACGCGCCGGC GGCGGCGGCGGCGGCGGCGATGGCGAGCCCATGAGCTCGTTGTCGTACGCGGGAACGCCG GAGGAGGAGGTGGCGCTGGCCCTCATGATGCTCTCCCGCGACACCTGGCCGTCCGTCGAG CGCGGTGGCGGCGGGGGCGAGTACTCGGACGACGGGAGCGACGACGGCTACGCGCTCCCT CCGCCGTCTCCCGCTCCGGCGCCGGCGCCGGTGCCGGAGAAGCGGACGCGGTTCCAGTGC CCCGCGTGCAAGAAGGTGTTCCGGTCCTACCAGGCGCTCGGCGGCCACCGCGCCAGCCAC GTCCGCGGCGGCAGGGGCGGCTGCTGCGCGCCTCCCGTCGCTCCTCCCCCTCAGCCGCAT CCGCAGCCGCCATTGCCGGAGCACGACGCGGGCGAGGAAGACATGGACGGGAAGGCGCCG CCGCACGAGTGCCCCTACTGCTACCGCGTGTTCGCCTCCGGGCAAGCTCTGGGCGGCCAC AAGAAGTCTCACGTCTGCTCCGCCGCCGCCGCCGCGGCCCATGCACAGACACCCGGCGGC GGCGCTCCTCCGCCCCAGCCCAAAATTCTCGGCATGATCGATCTCAACTTCGCGCCGCCC GTGGATGAGGTGGAGCTCTCCGCCGTGTCAGATCCCCACTTCCCCTCCAATCCACCAGGT CCTTGA

Peptide Sequence

PEP ID	Os02t0659500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:26689426:26690900:1 gene:Os02g0659500 transcript:Os02t0659500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os02t0659500-01)
Sequence	MAKNACKLCYRRFASPRALAGHMRSHSVAAANAAAAAAAAAAAKLQISSASSASTSFTAA DEEEEEEEEEEDVGFKKPLSIYALRENPKRSLRVSEYAFSDRESEAESTPTPAAKGLRAG GGGGGGDGEPMSSLSYAGTPEEEVALALMMLSRDTWPSVERGGGGGEYSDDGSDDGYALP PPSPAPAPAPVPEKRTRFQCPACKKVFRSYQALGGHRASHVRGGRGGCCAPPVAPPPQPH PQPPLPEHDAGEEDMDGKAPPHECPYCYRVFASGQALGGHKKSHVCSAAAAAAHAQTPGG GAPPPQPKILGMIDLNFAPPVDEVELSAVSDPHFPSNPPGP

Transcript Sequence

Transcript ID	Os02t0659500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:26689426:26690900:1 gene:Os02g0659500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os02t0659500-01)
Sequence	ATCCACTGCGTGCGTTTGTAACTTCCTCCGCAGCTATCTCCCTTGCTCTCGCCATCTCGC CATTCTAGCTCCCGCAAAGCTCTCCCCCCCCGAGGCGAGCTCTCTCTGCTCCCGAGCGAG AGCTCTCGCCATGGCGAAGAACGCATGCAAGCTCTGCTACCGCCGCTTCGCTAGCCCACG CGCCCTCGCGGGGCACATGCGGTCTCACTCTGTGGCGGCCGCCAACGCAGCCGCGGCTGC GGCGGCGGCCGCAGCCGCGAAGCTGCAGATCTCATCGGCGTCGTCCGCGTCGACGTCGTT CACCGCGGCCGATGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGACGTGGGATTCAAGAA GCCCCTTTCCATCTACGCGCTCCGGGAGAATCCCAAGCGCAGCCTCCGCGTCTCCGAGTA CGCGTTCTCCGACCGCGAGAGCGAGGCCGAGTCCACCCCGACGCCCGCAGCCAAGGGCTT ACGCGCCGGCGGCGGCGGCGGCGGCGGCGATGGCGAGCCCATGAGCTCGTTGTCGTACGC GGGAACGCCGGAGGAGGAGGTGGCGCTGGCCCTCATGATGCTCTCCCGCGACACCTGGCC GTCCGTCGAGCGCGGTGGCGGCGGGGGCGAGTACTCGGACGACGGGAGCGACGACGGCTA CGCGCTCCCTCCGCCGTCTCCCGCTCCGGCGCCGGCGCCGGTGCCGGAGAAGCGGACGCG GTTCCAGTGCCCCGCGTGCAAGAAGGTGTTCCGGTCCTACCAGGCGCTCGGCGGCCACCG CGCCAGCCACGTCCGCGGCGGCAGGGGCGGCTGCTGCGCGCCTCCCGTCGCTCCTCCCCC TCAGCCGCATCCGCAGCCGCCATTGCCGGAGCACGACGCGGGCGAGGAAGACATGGACGG GAAGGCGCCGCCGCACGAGTGCCCCTACTGCTACCGCGTGTTCGCCTCCGGGCAAGCTCT GGGCGGCCACAAGAAGTCTCACGTCTGCTCCGCCGCCGCCGCCGCGGCCCATGCACAGAC ACCCGGCGGCGGCGCTCCTCCGCCCCAGCCCAAAATTCTCGGCATGATCGATCTCAACTT CGCGCCGCCCGTGGATGAGGTGGAGCTCTCCGCCGTGTCAGATCCCCACTTCCCCTCCAA TCCACCAGGTCCTTGAAGCAAGAAAACCAGACTTGGCAATGGCGGAGATGATGATCTGAG GTGAGGCATAAATCGAAGAAACAGAAAGAATAACAAAAAGAGGGAAAAAAAAAAGAGAAG AGAAGGATAAACACAAGAACATATTTTTTAGCCCCTTAGTTAATCTTCTGGTCGTACCTT TTAGTATTCCATTCCATTGATTTGTGTTCAGAATGTTTAATTAATATGTTACTACCATGC TGTTGCTTTGTTTTTTTTTTGCCTGTTTAAGCTATGGAATCGATGTAGATTTGAGCAACT GACAGTGCAACAAGAACTAGCCCCTGTTCTTGATC