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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0658200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:26616524:26617346:-1 gene:Os02g0658200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os02t0658200-01)
Sequence

ATGGCCATGGCCAGTGGCGGCACCGTCTGCTCCATGTGCGGCGACGTGGGGTTCCCGGAC
AAGCTCTTCCGCTGCGCCCGCTGCCGCCGCCGCTTCCAGCACTCCTACTGCACCAACTAC
TACGGCGACGGGGCACCGGTGGAGGCGGGCGCCGGCGTGTGCGACTGGTGCCTCAGCGAC
GCCGCCGTCGTCGCCGGGAAGAAGGGGCCATCGTCGGAAGGGAACGAGGAGCCGTTCTCC
AGGGAGTACCGTGGCAGGAGCAAGCAGGCGGCGTCGACCGGCGGAGGCGAGCAGGAGGGC
GGCGGCGGCGGCGGCCGGAGGGTCTCCAAGGCCGGCGCTGTCCGTAGGTACAAGCTTCTC
AAGGACGTCTTGTGCTAA

Peptide Sequence

PEP ID

Os02t0658200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:26616524:26617346:-1 gene:Os02g0658200 transcript:Os02t0658200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os02t0658200-01)
Sequence

MAMASGGTVCSMCGDVGFPDKLFRCARCRRRFQHSYCTNYYGDGAPVEAGAGVCDWCLSD
AAVVAGKKGPSSEGNEEPFSREYRGRSKQAASTGGGEQEGGGGGGRRVSKAGAVRRYKLL
KDVLC

Transcript Sequence

Transcript ID

Os02t0658200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:26616524:26617346:-1 gene:Os02g0658200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os02t0658200-01)
Sequence

ACTTCCTTTCTCTCGCCACGATCTCCTCCATCTCTCTCTCTCTTCCTCCTCGCCGGCCGA
GTCAGCTATCTCGCCGCCGCCTGAGTACGTACGTCCGTCTCGGTATGGCCATGGCCAGTG
GCGGCACCGTCTGCTCCATGTGCGGCGACGTGGGGTTCCCGGACAAGCTCTTCCGCTGCG
CCCGCTGCCGCCGCCGCTTCCAGCACTCCTACTGCACCAACTACTACGGCGACGGGGCAC
CGGTGGAGGCGGGCGCCGGCGTGTGCGACTGGTGCCTCAGCGACGCCGCCGTCGTCGCCG
GGAAGAAGGGGCCATCGTCGGAAGGGAACGAGGAGCCGTTCTCCAGGGAGTACCGTGGCA
GGAGCAAGCAGGCGGCGTCGACCGGCGGAGGCGAGCAGGAGGGCGGCGGCGGCGGCGGCC
GGAGGGTCTCCAAGGCCGGCGCTGTCCGTAGGTACAAGCTTCTCAAGGACGTCTTGTGCT
AAAGAGCTATGGTCTAATACGGACCATAGCTGATGGATCAATCCTTCATTTTCACTGCGT
CACCCCGTCATGTACAAAACTAGCTCTAGCTAGCTAGGTGCCCATCGCTAGGTAATTAGA
TCATCCCTGTGTAAATTGTCCCCGTGTTAATTAACCGCGCGTGTGTGTATGAATGTATGA
TACTACTCCATCCTAGCTAATTAAAGCTATATGTATGTTTTC