Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0652800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:26323360:26326135:1 gene:Os02g0652800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily MFS_1 protein. (Os02t0652800-01)
Sequence

ATGGCGAAGCCACCGCCGGCGCCTCACCGCGCCAACCGCGCGCCGCCGGGCCTCTGCGCC
CTGCCGGCCATCTCCTACAACTCCCACCGGGGCCTCGTCCTGGGCCTCACCTTCGTCGCC
TACGCGCTCTACCACGCCTCCCGCAAGCCGCCCAGCATCGTCAAGCGCGCGCTATCCGAG
GCGTGGCCGCCCTTCCACGACCCGGCGCTCCTCGGCGAGACCGACGTCGCGTTCCTCGCC
TTCTACTCCCTCGGCATGTTCGTCGCGGGCCACCTCGGCGACCGCCTCGACCTCCGCCTC
TTCCTCGCCGTCGGCATGATCGGGAGCGGCACCGCCGTCGCGCTCTTCGGCGTCGGGTAC
TTCCTCTCCCTCCACTCCCTCGCCTTCTACCTCGCCGCCCAGGTGATCGCCGGATTGCTC
CAGTCCACCGGCTGGCCCTCCGTCGTCGCCATCGTCGGCAACTGGTTCCGTGGGCGGAGG
CGCGGCCTCATCATGGGGATATGGAACGCGCACACCTCCATCGGGAACATCAGCGGCTCC
CTCATCGCCGCCGCCGTGCTCCGCTACGGGTGGGGGTGGTCGTTCATCGTGCCGGGCCTG
CTCATCGCGTTCGGTGGCGTTCTCGTGTTCTTCTTCCTCGCGCCTTACCCGGAGGACCTT
GGCTTCTCTCCGACGACGCTGCCCAAGGCAGTGAGTGAGGCGAGCACCGACGAGGAGGAC
AGCAGCAGCAGCGCGAGCGCCGCCGGTGGCGCCGGGAAGGAGGAGAGGAGGGACGCCGTG
GGGATGTGGAAGGCGTTCGCGATTCCTGGCGTCATCACCTTCGCGCTCTGCCTCTTCTTC
GCGAAGCTGGTCGCCTACACGTTCTTGTACTGGCTTCCTTTCTACCTGAGCCAGACGGCT
ATTGGAGGCAAGGAAATGTCAGTCACGTCTGCTGGGTATCTCTCAGCTTTGTTTGATGTA
GGTGGAATCATTGGTGGAATTCTTGCTGGGTTCATATCTGATCATCTCAATGCAAGGGCC
ACCACGGCAGCAATCTTCATGTACTTGGCTATTCCATCTCTTTACGCCTTCCATGCATAT
GGCAGTACTTCAGAAGTGGCAAACATTGGCTTGATGATGATCAGTGGCTTGTTTGTTAAT
GGACCTTATGCTCTCATAACAACTGCAGTTTCTGCCGATCTGGGAACCCACAAATCTCTT
AAGGGGGATTCCCGTGCGTTGGCCACCGTCACATCAATTATAGATGGAACAGGATCGCTT
GGTGCTGCCTTAGGTCCATTCATTACAGGTTTTATTTCAAAACGTGGATGGGATTCAGTT
TTCACAATGCTTATATTTTGTGCATTAGCTGCCGGCGTCTTATTGTCACGTATTGTGAAG
TCTGAAATTGTTCATATCATTCAGAATCGGAGAAATCACACACTTGACATGCATAACAGA
ACTGCAGATTCTGGTGCTCAACCACTTTTAGAAGGAGACACTTGA

Peptide Sequence

PEP ID

Os02t0652800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:26323360:26326135:1 gene:Os02g0652800 transcript:Os02t0652800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily MFS_1 protein. (Os02t0652800-01)
Sequence

MAKPPPAPHRANRAPPGLCALPAISYNSHRGLVLGLTFVAYALYHASRKPPSIVKRALSE
AWPPFHDPALLGETDVAFLAFYSLGMFVAGHLGDRLDLRLFLAVGMIGSGTAVALFGVGY
FLSLHSLAFYLAAQVIAGLLQSTGWPSVVAIVGNWFRGRRRGLIMGIWNAHTSIGNISGS
LIAAAVLRYGWGWSFIVPGLLIAFGGVLVFFFLAPYPEDLGFSPTTLPKAVSEASTDEED
SSSSASAAGGAGKEERRDAVGMWKAFAIPGVITFALCLFFAKLVAYTFLYWLPFYLSQTA
IGGKEMSVTSAGYLSALFDVGGIIGGILAGFISDHLNARATTAAIFMYLAIPSLYAFHAY
GSTSEVANIGLMMISGLFVNGPYALITTAVSADLGTHKSLKGDSRALATVTSIIDGTGSL
GAALGPFITGFISKRGWDSVFTMLIFCALAAGVLLSRIVKSEIVHIIQNRRNHTLDMHNR
TADSGAQPLLEGDT

Transcript Sequence

Transcript ID

Os02t0652800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:26323360:26326135:1 gene:Os02g0652800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Major facilitator superfamily MFS_1 protein. (Os02t0652800-01)
Sequence

GAAAGCCTCCGCCACCCGTTACCGGCCGCAACCCCCGCTCCGCTACCGCCCATGGCGAAG
CCACCGCCGGCGCCTCACCGCGCCAACCGCGCGCCGCCGGGCCTCTGCGCCCTGCCGGCC
ATCTCCTACAACTCCCACCGGGGCCTCGTCCTGGGCCTCACCTTCGTCGCCTACGCGCTC
TACCACGCCTCCCGCAAGCCGCCCAGCATCGTCAAGCGCGCGCTATCCGAGGCGTGGCCG
CCCTTCCACGACCCGGCGCTCCTCGGCGAGACCGACGTCGCGTTCCTCGCCTTCTACTCC
CTCGGCATGTTCGTCGCGGGCCACCTCGGCGACCGCCTCGACCTCCGCCTCTTCCTCGCC
GTCGGCATGATCGGGAGCGGCACCGCCGTCGCGCTCTTCGGCGTCGGGTACTTCCTCTCC
CTCCACTCCCTCGCCTTCTACCTCGCCGCCCAGGTGATCGCCGGATTGCTCCAGTCCACC
GGCTGGCCCTCCGTCGTCGCCATCGTCGGCAACTGGTTCCGTGGGCGGAGGCGCGGCCTC
ATCATGGGGATATGGAACGCGCACACCTCCATCGGGAACATCAGCGGCTCCCTCATCGCC
GCCGCCGTGCTCCGCTACGGGTGGGGGTGGTCGTTCATCGTGCCGGGCCTGCTCATCGCG
TTCGGTGGCGTTCTCGTGTTCTTCTTCCTCGCGCCTTACCCGGAGGACCTTGGCTTCTCT
CCGACGACGCTGCCCAAGGCAGTGAGTGAGGCGAGCACCGACGAGGAGGACAGCAGCAGC
AGCGCGAGCGCCGCCGGTGGCGCCGGGAAGGAGGAGAGGAGGGACGCCGTGGGGATGTGG
AAGGCGTTCGCGATTCCTGGCGTCATCACCTTCGCGCTCTGCCTCTTCTTCGCGAAGCTG
GTCGCCTACACGTTCTTGTACTGGCTTCCTTTCTACCTGAGCCAGACGGCTATTGGAGGC
AAGGAAATGTCAGTCACGTCTGCTGGGTATCTCTCAGCTTTGTTTGATGTAGGTGGAATC
ATTGGTGGAATTCTTGCTGGGTTCATATCTGATCATCTCAATGCAAGGGCCACCACGGCA
GCAATCTTCATGTACTTGGCTATTCCATCTCTTTACGCCTTCCATGCATATGGCAGTACT
TCAGAAGTGGCAAACATTGGCTTGATGATGATCAGTGGCTTGTTTGTTAATGGACCTTAT
GCTCTCATAACAACTGCAGTTTCTGCCGATCTGGGAACCCACAAATCTCTTAAGGGGGAT
TCCCGTGCGTTGGCCACCGTCACATCAATTATAGATGGAACAGGATCGCTTGGTGCTGCC
TTAGGTCCATTCATTACAGGTTTTATTTCAAAACGTGGATGGGATTCAGTTTTCACAATG
CTTATATTTTGTGCATTAGCTGCCGGCGTCTTATTGTCACGTATTGTGAAGTCTGAAATT
GTTCATATCATTCAGAATCGGAGAAATCACACACTTGACATGCATAACAGAACTGCAGAT
TCTGGTGCTCAACCACTTTTAGAAGGAGACACTTGAAGTCGAGGCAGTTCATATGAGCTG
GTGGTGTGGAATACAGTTTTGCAATGCTGCCGTGATTGGGATATGCAACAGTTGATTCTA
GAGAAAGGCAAACTAGATCGAGCTTATGATCTCAGTTTCTACAGCTTGGTGCTTACGATC
ACAGCAAGCAACATGATCGCGGTGGCATTTGTAGGTTTTGTTTCGTCAGAGGAAAATATA
GTCATCGGTTCATTATCCATGGTGACATTCTTTTAGTATGCAAATGTGTTGTAGTAACCA
TGTTCTTTTTTCCTCGTATCACGGTTTAGGTGCTAGATGAACATAGATATACACCAATAT
CTGCCTCTCCCAAGTACTGGTCCTGAAGGCTGTGTACATAATGTTTACTGCTATTCGTAT
CGCGGTCATCAACATCGGTGAAGAGAGATCCTGATGTAGCGCCTCTGCTTATGTATTAAG
TATTTCAGGTTACTCTTTTGAAAAATCTCTCAGGTC