Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0644000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:25890445:25900918:-1 gene:Os02g0644000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar processing enzyme 3, cysteine endopeptidase REP-2, legumain 2 description:Similar to C13 endopeptidase NP1 (Fragment). (Os02t0644000-01);Similar to C13 cysteine proteinase. (Os02t0644000-02)
Sequence	TTAGTCATCCTGTTGTCCATAATCGTTCAGATCGTCGGGGAAGGCCTCGTCGCTCGTCCC ACTCCTCTATGTCGCACCCCGATCTGGGCTGATGTATGCCATGCATACCAGATATTACGG AAGGGAGGGCTAAAGGAGGAGAACATTGTCGTGTTTATGTATGACGACATTGCCAATAAT ATACTTAACCCGAGACCAGGGGTTATTGTCAATCATCCACAGGGTGAAGATGTTTATGCA GGAGTTCCGAAGGATTACACTGGAGACGAAGTCACTGCAAAAAACTTTTACGCGGTTCTC TTGGGCAATAAAACTGCAGTTACTGGGGGTAGTAGGAAGGTCATAGATAGCAAACCAAAT GACCACATATTTATCTTCTACTCTGATCATGGGGGTCCTGGAGTTCTTGGTATGCCCAAT CTGCCATATCTTTATGCTGCTGACTTCATGAAGGTGTTACAAGAAAAACATGCCTCCAAT ACTTACGCTAAAATGGTTATATATGTAGAAGCGTGTGAAAGTGGCAGTATTTTCGAAGGT TTGATGCCAGAGGACCTTAATATTTATGTCACAACAGCGTCTAATGCAGAAGAGAGTAGT TGGGGGACGTACTGCCCAGGAATGGAACCATCGCCTCCTTCCGAGTACATCACCTGCTTA GGTGACCTATACAGCGTTTCTTGGATGGAAGACAGTGAGACTCACAATCTGAAGGAGGAA TCAATTAAGAAGCAGTACGAAGTGGTTAAGAAGCGTACCTCTGACATGAACAGCTACGGT GCTGGCTCTCATGTTATGGAGTACGGGGACAGGACATTCAAGGATGACAAGCTTTACCTA TACCAAGGTTTCGACCCTGCAAATGCCGAAGTTAAGAACAAGCTATCATGGGAAGGCCCA AAGGCTGCAGTCAACCAAAGAGATGCAGATCTTCTTTTCCTCTGGAGAAGGTATGAGCTG TTACATGACAAGTCCGAAGAGAAGCTGAAAGCTCTGAGGGAGATCAGTGACACTGTTATG CATAGGAAGCTTCTTGACAGCAGTGTTGATCTTGTCGGAAAACTTCTCTTTGGATTTGGA AATGGGCCTTCTGTGCTTCAAGCTGTTAGACCTTCTGGTCAGCCACTCGTTGATGATTGG GATTGTTTGAAGAGAATGGTACGGATCTTTGAGTCGCATTGCGGACCGCTCACTCAGTAC GGTATGAAGCACATGAGGGCGTTTGCTAATATTTGCAACAACGGTATCTCTGGCGCTTCA ATGAAGGAAGCAAGCATCGCTACTTGCAGCAGTCACAACTCGGGTAGATGGAGCTCGCTG GTGCAGGGGTACAGTGCTTGA

Peptide Sequence

PEP ID	Os02t0644000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:25890445:25900918:-1 gene:Os02g0644000 transcript:Os02t0644000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar processing enzyme 3, cysteine endopeptidase REP-2, legumain 2 description:Similar to C13 endopeptidase NP1 (Fragment). (Os02t0644000-01);Similar to C13 cysteine proteinase. (Os02t0644000-02)
Sequence	LVILLSIIVQIVGEGLVARPTPLCRTPIWADVCHAYQILRKGGLKEENIVVFMYDDIANN ILNPRPGVIVNHPQGEDVYAGVPKDYTGDEVTAKNFYAVLLGNKTAVTGGSRKVIDSKPN DHIFIFYSDHGGPGVLGMPNLPYLYAADFMKVLQEKHASNTYAKMVIYVEACESGSIFEG LMPEDLNIYVTTASNAEESSWGTYCPGMEPSPPSEYITCLGDLYSVSWMEDSETHNLKEE SIKKQYEVVKKRTSDMNSYGAGSHVMEYGDRTFKDDKLYLYQGFDPANAEVKNKLSWEGP KAAVNQRDADLLFLWRRYELLHDKSEEKLKALREISDTVMHRKLLDSSVDLVGKLLFGFG NGPSVLQAVRPSGQPLVDDWDCLKRMVRIFESHCGPLTQYGMKHMRAFANICNNGISGAS MKEASIATCSSHNSGRWSSLVQGYSA

Transcript Sequence

Transcript ID	Os02t0644000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:25890445:25900918:-1 gene:Os02g0644000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar processing enzyme 3, cysteine endopeptidase REP-2, legumain 2 description:Similar to C13 endopeptidase NP1 (Fragment). (Os02t0644000-01);Similar to C13 cysteine proteinase. (Os02t0644000-02)
Sequence	ACTGTTGCCCATCTCCTTCTTATCGCTGTTCCTCCCTACCGCCGCCACTTCCGCCCTCAA CCGCCACCACCGTCGCATGAGATCCACCTTCTCTCTCCCCCTCGTGGACCTTCCTACCCC CGCTGATTCACCGCCAATGCGTCACCGCCTCCTACGCCGGTCACGATCTCCATCATCGTA ACGCACAATCTAAAAAGATACAAACTCCATCCCTCCCCCCCCCCCCCACCCCCCTAAACC CTAATTAGTCATCCTGTTGTCCATAATCGTTCAGATCGTCGGGGAAGGCCTCGTCGCTCG TCCCACTCCTCTATGTCGCACCCCGATCTGGGCTGATGTATGCCATGCATACCAGATATT ACGGAAGGGAGGGCTAAAGGAGGAGAACATTGTCGTGTTTATGTATGACGACATTGCCAA TAATATACTTAACCCGAGACCAGGGGTTATTGTCAATCATCCACAGGGTGAAGATGTTTA TGCAGGAGTTCCGAAGGATTACACTGGAGACGAAGTCACTGCAAAAAACTTTTACGCGGT TCTCTTGGGCAATAAAACTGCAGTTACTGGGGGTAGTAGGAAGGTCATAGATAGCAAACC AAATGACCACATATTTATCTTCTACTCTGATCATGGGGGTCCTGGAGTTCTTGGTATGCC CAATCTGCCATATCTTTATGCTGCTGACTTCATGAAGGTGTTACAAGAAAAACATGCCTC CAATACTTACGCTAAAATGGTTATATATGTAGAAGCGTGTGAAAGTGGCAGTATTTTCGA AGGTTTGATGCCAGAGGACCTTAATATTTATGTCACAACAGCGTCTAATGCAGAAGAGAG TAGTTGGGGGACGTACTGCCCAGGAATGGAACCATCGCCTCCTTCCGAGTACATCACCTG CTTAGGTGACCTATACAGCGTTTCTTGGATGGAAGACAGTGAGACTCACAATCTGAAGGA GGAATCAATTAAGAAGCAGTACGAAGTGGTTAAGAAGCGTACCTCTGACATGAACAGCTA CGGTGCTGGCTCTCATGTTATGGAGTACGGGGACAGGACATTCAAGGATGACAAGCTTTA CCTATACCAAGGTTTCGACCCTGCAAATGCCGAAGTTAAGAACAAGCTATCATGGGAAGG CCCAAAGGCTGCAGTCAACCAAAGAGATGCAGATCTTCTTTTCCTCTGGAGAAGGTATGA GCTGTTACATGACAAGTCCGAAGAGAAGCTGAAAGCTCTGAGGGAGATCAGTGACACTGT TATGCATAGGAAGCTTCTTGACAGCAGTGTTGATCTTGTCGGAAAACTTCTCTTTGGATT TGGAAATGGGCCTTCTGTGCTTCAAGCTGTTAGACCTTCTGGTCAGCCACTCGTTGATGA TTGGGATTGTTTGAAGAGAATGGTACGGATCTTTGAGTCGCATTGCGGACCGCTCACTCA GTACGGTATGAAGCACATGAGGGCGTTTGCTAATATTTGCAACAACGGTATCTCTGGCGC TTCAATGAAGGAAGCAAGCATCGCTACTTGCAGCAGTCACAACTCGGGTAGATGGAGCTC GCTGGTGCAGGGGTACAGTGCTTGATCTGCCGCAACACGTGATATAGCCTCAAAACTTAT GCCTTGTACTCGTACTTCCTCAAAACAATACCTTCAGGACTGCAAATAACCGTCCAAGGA TGTACCGCTGTATGCTACTGTACCTCTATGTGTGCAATATAGATGCCCTGTATATACGAG TATATGAATGAATCGTGTGCTTTTACATGCCCG