Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0643000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:25828426:25831324:-1 gene:Os02g0643000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VAP27. (Os02t0643000-01)
Sequence	ATGCAGGAGGCGAAAAAAGATTCGATCTTTGGAGGCCTTGCCTCTGGGGCGCCCGTCGGA GCGGATCGCTTCCCGTTTGATCCTCGGGAGTATTCGCCGGCGATGAGCTCCGACTCCAGG GAGCTGCTCGGGATCGATCCCCCGGAGCTCATCTTCCCCTTCGAATTAAAGAAGCAAATC TCGTGTTCTCTGCACCTAACAAACAAGACAGATGAATATGTCACGTTTAAGGTTAAGACA ACTAGTCCAAAGAAGTACTGCGTCCGTCCAAATAACGGCATTGTGGCTCCCCAGTCCACA TCCAATGTTCTTGTAACAATGCAAGCTCAGCGGGAGGCGCCACCGGACATGCAATGCAAG GACAAATTCCTTGTGCAGAGTGCCATAGTGACACAAGAGCTCACACCGAAGGATATCACC GGAGACATGTTTACGAAAGAATCAGGTAATGTGGTGGATGAGGTGAAGTTAAAGGTTGTT TATACTCAACCTCACCCGACATCTCTCAATGGCGGGTCTGAGGAAGGTCTAGGAAGCTTG AGTTATCAAGAAGCAACAAAAGGATCTAGAGAATCAGAAACAGTAACCTCTGAGCCATTG GCCTTGATTTCAAAGTTGAAGGAGGAGAAGAGTTCTGCCATTCAACAGAACATGAAGCTT CGAGAAGAACTGGATCTTCTAAGGAGGCAAATGGGGAGTCAGCACGGTGGTTTCTCACTA GTTTTTGTGCTGGTTATTGCTATTCTGGGAATCCTGCTTGGTTTTCTCATTAAGAGATGA

Peptide Sequence

PEP ID	Os02t0643000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:25828426:25831324:-1 gene:Os02g0643000 transcript:Os02t0643000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VAP27. (Os02t0643000-01)
Sequence	MQEAKKDSIFGGLASGAPVGADRFPFDPREYSPAMSSDSRELLGIDPPELIFPFELKKQI SCSLHLTNKTDEYVTFKVKTTSPKKYCVRPNNGIVAPQSTSNVLVTMQAQREAPPDMQCK DKFLVQSAIVTQELTPKDITGDMFTKESGNVVDEVKLKVVYTQPHPTSLNGGSEEGLGSL SYQEATKGSRESETVTSEPLALISKLKEEKSSAIQQNMKLREELDLLRRQMGSQHGGFSL VFVLVIAILGILLGFLIKR

Transcript Sequence

Transcript ID	Os02t0643000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:25828426:25831324:-1 gene:Os02g0643000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VAP27. (Os02t0643000-01)
Sequence	ATAATATTTTGCTGGAGAATAGTCGGATGCAGGAGGCGAAAAAAGATTCGATCTTTGGAG GCCTTGCCTCTGGGGCGCCCGTCGGAGCGGATCGCTTCCCGTTTGATCCTCGGGAGTATT CGCCGGCGATGAGCTCCGACTCCAGGGAGCTGCTCGGGATCGATCCCCCGGAGCTCATCT TCCCCTTCGAATTAAAGAAGCAAATCTCGTGTTCTCTGCACCTAACAAACAAGACAGATG AATATGTCACGTTTAAGGTTAAGACAACTAGTCCAAAGAAGTACTGCGTCCGTCCAAATA ACGGCATTGTGGCTCCCCAGTCCACATCCAATGTTCTTGTAACAATGCAAGCTCAGCGGG AGGCGCCACCGGACATGCAATGCAAGGACAAATTCCTTGTGCAGAGTGCCATAGTGACAC AAGAGCTCACACCGAAGGATATCACCGGAGACATGTTTACGAAAGAATCAGGTAATGTGG TGGATGAGGTGAAGTTAAAGGTTGTTTATACTCAACCTCACCCGACATCTCTCAATGGCG GGTCTGAGGAAGGTCTAGGAAGCTTGAGTTATCAAGAAGCAACAAAAGGATCTAGAGAAT CAGAAACAGTAACCTCTGAGCCATTGGCCTTGATTTCAAAGTTGAAGGAGGAGAAGAGTT CTGCCATTCAACAGAACATGAAGCTTCGAGAAGAACTGGATCTTCTAAGGAGGCAAATGG GGAGTCAGCACGGTGGTTTCTCACTAGTTTTTGTGCTGGTTATTGCTATTCTGGGAATCC TGCTTGGTTTTCTCATTAAGAGATGAGCGTCTGTGATCATATATCTTGTTCCACTTTTCT GTGAAAGAGTTGATAGTCGTGGGCCTTGTCTGTTGTGTTAGCCATTTGTACCAACTCATG ATCGTCTTATCTTAGGACCTGATTCCTCTTGTAATTTCTGACTATCAAATTCCAATCAGT AGCTACTGCATCCAGTCAATAAGTCGTCTGTCCATTTAGCATGTTTGAGTATAAGTTTTT TTTGGTCAATTGTATTCATCTTTTGACACCTGTAAATATGACACTTCCCTTAACATTATG GCTTGCGATATGTATATGCTGGATCCTTGTG