Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0642200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:25789355:25791213:-1 gene:Os02g0642200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:REMORIN 1.4 description:Similar to Remorin. (Os02t0642200-01)
Sequence

ATGGCCGGGGAGGCATTGAAGGAGGCGGGGGCGACGCCCGCCGCAGCGAACGCGGGGGAG
GAGAAGGCCGTCATCCCGGCGGCTTCGACATCGCCGGTGATCTCCAAGACCGATGATGAC
ACGGAGCCGCCGGCCGATGACTCCAAGGCTCTCGTCGTCTTCGTCGAGAAGGTTGCTGAT
AAACCTCATGCTGAGAAGGCAACAGCAACAGCAACACCAACAAGGACCTCAAATGACAGA
GATATTGCCCTTGCAAAGGTGGAGACAGACAAGCGAGAATCGTTGATCAAAGCATGGGAG
GAGAACGAAAAGGCAAAAGCGGAGAACAGGGCCTCTAAGAAGTTATTGGATATTATTTCA
TGGGAGAACACAAAGAAGGCAGTAATAAAAACTCAACTGAAAAAGAAGGAAGAAGAGTTG
GAAAGGAAGAAGGCAGAGTACGCTGAGAAGGCGAAGAACAAGGAAGCAATCGTCCATAAG
GAAGCTGAAGAAAAGAGAGCAATGGTGATGGCCCGGCGCGGTGAAGAAGTGATCAAGGCC
GAGGAGATAGCAGCTAAGTACCGTGCAACCGGAGTGACACCGAAGAAACATATCGGGTGT
TTTGGGGCATAA

Peptide Sequence

PEP ID

Os02t0642200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:25789355:25791213:-1 gene:Os02g0642200 transcript:Os02t0642200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:REMORIN 1.4 description:Similar to Remorin. (Os02t0642200-01)
Sequence

MAGEALKEAGATPAAANAGEEKAVIPAASTSPVISKTDDDTEPPADDSKALVVFVEKVAD
KPHAEKATATATPTRTSNDRDIALAKVETDKRESLIKAWEENEKAKAENRASKKLLDIIS
WENTKKAVIKTQLKKKEEELERKKAEYAEKAKNKEAIVHKEAEEKRAMVMARRGEEVIKA
EEIAAKYRATGVTPKKHIGCFGA

Transcript Sequence

Transcript ID

Os02t0642200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:25789355:25791213:-1 gene:Os02g0642200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:REMORIN 1.4 description:Similar to Remorin. (Os02t0642200-01)
Sequence

GTATCAGTCGGTATTCAGTACGCACTACGCAGCAGCCCGTGAGTCGTCGTGACCAAACGT
ATAGTATACTAGCTACCAAAAGCAGTACGGTGCCTGGTTTCATTGTAAGCAGCCGCGCCG
AGTCAGTAGCGTAGCGTGAGCGCGGTGAAGATGGCCGGGGAGGCATTGAAGGAGGCGGGG
GCGACGCCCGCCGCAGCGAACGCGGGGGAGGAGAAGGCCGTCATCCCGGCGGCTTCGACA
TCGCCGGTGATCTCCAAGACCGATGATGACACGGAGCCGCCGGCCGATGACTCCAAGGCT
CTCGTCGTCTTCGTCGAGAAGGTTGCTGATAAACCTCATGCTGAGAAGGCAACAGCAACA
GCAACACCAACAAGGACCTCAAATGACAGAGATATTGCCCTTGCAAAGGTGGAGACAGAC
AAGCGAGAATCGTTGATCAAAGCATGGGAGGAGAACGAAAAGGCAAAAGCGGAGAACAGG
GCCTCTAAGAAGTTATTGGATATTATTTCATGGGAGAACACAAAGAAGGCAGTAATAAAA
ACTCAACTGAAAAAGAAGGAAGAAGAGTTGGAAAGGAAGAAGGCAGAGTACGCTGAGAAG
GCGAAGAACAAGGAAGCAATCGTCCATAAGGAAGCTGAAGAAAAGAGAGCAATGGTGATG
GCCCGGCGCGGTGAAGAAGTGATCAAGGCCGAGGAGATAGCAGCTAAGTACCGTGCAACC
GGAGTGACACCGAAGAAACATATCGGGTGTTTTGGGGCATAAGAAACATCGATCCGAGCC
ATATACTTGTTTTTCTTTCTCTTTCGAAAGTTATTTGTGTTGGGTTGTAACTTGTAAGTG
TGTACTTTTTTTTCTTTGGAAAAATTGGAACCATGCCATTATAATTTTGTAAAATTTGAG
ATATGCT