Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0640500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:25723956:25726080:-1 gene:Os02g0640500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Salt Intolerance 1 description:Lectin receptor-like kinase, Mediation of salt sensitivity, Regulation of ethylene homeostasis (Os02t0640500-01)
Sequence	ATGCGGCGTCCCGAGCTAATCATGCGGTCCCTTCCTCTAATTCTCTTCCTAAGCCTTGGG AGTTTCCACCTCGCCGCAGCCGCCGTTGATGACCAGTTCACCTTCGACGGCTTCGCCGGC GTGAACCTCACACTCGACGGCACGGCCGTGGTCACGCCGGGCGGCCTCCTCATGCTGACG AACGGCACGACTCTGCTGAAAGGCCACGCCTTCTACCCTTCTCCCCTGCGTTTCTTTCAC GAGGCGACGAGCGGCGGCGGATCCTCCACCGTGCGGTCCTTCTCGACGGCGTTCGTGTTC GGCATCGTCAGCGAGTACGCCGACCTGAGCAGCCCCGGCCTGGCGTTCGTCGTCGCCAAG AGCCGCGACTTCTCGTCGGCGCTGCAGAGCCAGTACATGGGCCTGGCCAACGCGCGCAAC AACGGCAACGCCAGCAACCACTTCCTCGCCGTGGAGCTGGACACCATCGTCAACGCCGAG TTCGGCGACATGAGCGACAACCACGTCGGGATCGACGTGGACGGCCTCGCGTCCGCCGCC GCCGACGACGCGGGCTACCACGACGACCGCACCGGCGCGTTCGTGAACATGAGCCTGCTC AGCCGCGCGGCGGCGCGGGTGTGGGTGGACTTCGACGCGCGCACCTCGCTCGTCAACGTC ACCATGGCTCCCCTCGAGCTGCCCAAGCCGACGACGCCGCTGCTCTCCGCCGCCGTGAAC CTCTCGGCCGTGATCGAAGACGAAGCCTACGTCGGCTTCTCCTCGTCCACCGGCGTCGTC GCGAGCCGCCACTACGTGCTTGCCTGGAGCTTCAAGATGGACGGGCCAGCACCATCGCTA AACGTATCAAAGCTGCCGGCGTTGCCTGTCACGATCGCCAGGGCTCCGTCCAACGTTCTG AAGATACTATTGCCCATAGCCTCGGCCGCACTGGTGTCGGCATTGGCCATTGCTGTTCTT GTGATTCACCGGAGACGACGCAGGTATGCGGAGCTTAAAGAGGAGTGGGAGGTTGCGTTT GGGCCACACCGGTTCTCATACAAGGATCTGTTCCGTGCCACGAATGGTTTCTCCGATGAG CGATTGCTTGGCTTTGGAGGATTTGGAAGGGTGTACAAGGGAGTACTACTGGTATCCCGA GTGGAGATTGCAGTGAAGAAGGTATCTCACGAGTCGAGGCAGGGAATGAAGGAGTTCATT GCCGAGGTGGTTAGCATTGGTCAACTTCGACACCGGAACCTTGTGCAGTTGCTTGGATAT TGTCGGCAGAAGGGTGAGCTACTGTTAGTCTATGATTATATGCCAAATGGTAGTCTTGAT AAGTATCTGTATGCTGAGAACAGCAAAATCTTGAGTTGGGCTCAAAGGTTTAGAATCATC AAAGGCATCGCATCGAGCATATTGTATCTCCATGAGGATTGGGAACAAGTCGTTCTGCAT CGAGACATCAAGGCAAGCAACGTATTGTTGGACGCCGAAATGAACTGTCGGCTAGGTGAC TTTGGCCTTGCAAGGTTATATGATCGTGGCACCGACCCACACACCACACACGTGGTTGGC ACAATAGGGTACCTAGCCCCCGAGCTAGGGCACACCGGCAGGCCATCGAAGGCGTCCGAC ATCTTCGCCTTCGGTGTGTTCATGCTAGAGGTTACCTGCGGACGGCGGCCTGTCTTGCAA GACACGAACGGCGGTCAACTCTTGTTGGTGGACATGGTGCTGGAGCATTGGCGGCAAGGG ACGGTCACTGACGCTGTGGACCCACGGCTGCAAGGCGACTTTGCCGTGGAAGAAGCAAGC CTGGTGCTGAAACTATGCTTGCTTTGTTCACATCCTCTGCCCAGTGCTCGTCCGGGCATA CGGCAAGTCGTGCAGTTGCTAGACGGTGCCATGCCACTCCCAGAGCTATCACAAGCTCAC CTAAGCTGTAACATGCTGGCCTTGATGCAAAATCAGATGGGCAACTCATGCTCTGTTGCG TCGTCGGTAGCTGGTAATATCTCTGACATTCCTCGAGCGAGATGA

Peptide Sequence

PEP ID	Os02t0640500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:25723956:25726080:-1 gene:Os02g0640500 transcript:Os02t0640500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Salt Intolerance 1 description:Lectin receptor-like kinase, Mediation of salt sensitivity, Regulation of ethylene homeostasis (Os02t0640500-01)
Sequence	MRRPELIMRSLPLILFLSLGSFHLAAAAVDDQFTFDGFAGVNLTLDGTAVVTPGGLLMLT NGTTLLKGHAFYPSPLRFFHEATSGGGSSTVRSFSTAFVFGIVSEYADLSSPGLAFVVAK SRDFSSALQSQYMGLANARNNGNASNHFLAVELDTIVNAEFGDMSDNHVGIDVDGLASAA ADDAGYHDDRTGAFVNMSLLSRAAARVWVDFDARTSLVNVTMAPLELPKPTTPLLSAAVN LSAVIEDEAYVGFSSSTGVVASRHYVLAWSFKMDGPAPSLNVSKLPALPVTIARAPSNVL KILLPIASAALVSALAIAVLVIHRRRRRYAELKEEWEVAFGPHRFSYKDLFRATNGFSDE RLLGFGGFGRVYKGVLLVSRVEIAVKKVSHESRQGMKEFIAEVVSIGQLRHRNLVQLLGY CRQKGELLLVYDYMPNGSLDKYLYAENSKILSWAQRFRIIKGIASSILYLHEDWEQVVLH RDIKASNVLLDAEMNCRLGDFGLARLYDRGTDPHTTHVVGTIGYLAPELGHTGRPSKASD IFAFGVFMLEVTCGRRPVLQDTNGGQLLLVDMVLEHWRQGTVTDAVDPRLQGDFAVEEAS LVLKLCLLCSHPLPSARPGIRQVVQLLDGAMPLPELSQAHLSCNMLALMQNQMGNSCSVA SSVAGNISDIPRAR

Transcript Sequence

Transcript ID	Os02t0640500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:25723956:25726080:-1 gene:Os02g0640500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Salt Intolerance 1 description:Lectin receptor-like kinase, Mediation of salt sensitivity, Regulation of ethylene homeostasis (Os02t0640500-01)
Sequence	GTTTGGCGCAAACGCCATGCGGCGTCCCGAGCTAATCATGCGGTCCCTTCCTCTAATTCT CTTCCTAAGCCTTGGGAGTTTCCACCTCGCCGCAGCCGCCGTTGATGACCAGTTCACCTT CGACGGCTTCGCCGGCGTGAACCTCACACTCGACGGCACGGCCGTGGTCACGCCGGGCGG CCTCCTCATGCTGACGAACGGCACGACTCTGCTGAAAGGCCACGCCTTCTACCCTTCTCC CCTGCGTTTCTTTCACGAGGCGACGAGCGGCGGCGGATCCTCCACCGTGCGGTCCTTCTC GACGGCGTTCGTGTTCGGCATCGTCAGCGAGTACGCCGACCTGAGCAGCCCCGGCCTGGC GTTCGTCGTCGCCAAGAGCCGCGACTTCTCGTCGGCGCTGCAGAGCCAGTACATGGGCCT GGCCAACGCGCGCAACAACGGCAACGCCAGCAACCACTTCCTCGCCGTGGAGCTGGACAC CATCGTCAACGCCGAGTTCGGCGACATGAGCGACAACCACGTCGGGATCGACGTGGACGG CCTCGCGTCCGCCGCCGCCGACGACGCGGGCTACCACGACGACCGCACCGGCGCGTTCGT GAACATGAGCCTGCTCAGCCGCGCGGCGGCGCGGGTGTGGGTGGACTTCGACGCGCGCAC CTCGCTCGTCAACGTCACCATGGCTCCCCTCGAGCTGCCCAAGCCGACGACGCCGCTGCT CTCCGCCGCCGTGAACCTCTCGGCCGTGATCGAAGACGAAGCCTACGTCGGCTTCTCCTC GTCCACCGGCGTCGTCGCGAGCCGCCACTACGTGCTTGCCTGGAGCTTCAAGATGGACGG GCCAGCACCATCGCTAAACGTATCAAAGCTGCCGGCGTTGCCTGTCACGATCGCCAGGGC TCCGTCCAACGTTCTGAAGATACTATTGCCCATAGCCTCGGCCGCACTGGTGTCGGCATT GGCCATTGCTGTTCTTGTGATTCACCGGAGACGACGCAGGTATGCGGAGCTTAAAGAGGA GTGGGAGGTTGCGTTTGGGCCACACCGGTTCTCATACAAGGATCTGTTCCGTGCCACGAA TGGTTTCTCCGATGAGCGATTGCTTGGCTTTGGAGGATTTGGAAGGGTGTACAAGGGAGT ACTACTGGTATCCCGAGTGGAGATTGCAGTGAAGAAGGTATCTCACGAGTCGAGGCAGGG AATGAAGGAGTTCATTGCCGAGGTGGTTAGCATTGGTCAACTTCGACACCGGAACCTTGT GCAGTTGCTTGGATATTGTCGGCAGAAGGGTGAGCTACTGTTAGTCTATGATTATATGCC AAATGGTAGTCTTGATAAGTATCTGTATGCTGAGAACAGCAAAATCTTGAGTTGGGCTCA AAGGTTTAGAATCATCAAAGGCATCGCATCGAGCATATTGTATCTCCATGAGGATTGGGA ACAAGTCGTTCTGCATCGAGACATCAAGGCAAGCAACGTATTGTTGGACGCCGAAATGAA CTGTCGGCTAGGTGACTTTGGCCTTGCAAGGTTATATGATCGTGGCACCGACCCACACAC CACACACGTGGTTGGCACAATAGGGTACCTAGCCCCCGAGCTAGGGCACACCGGCAGGCC ATCGAAGGCGTCCGACATCTTCGCCTTCGGTGTGTTCATGCTAGAGGTTACCTGCGGACG GCGGCCTGTCTTGCAAGACACGAACGGCGGTCAACTCTTGTTGGTGGACATGGTGCTGGA GCATTGGCGGCAAGGGACGGTCACTGACGCTGTGGACCCACGGCTGCAAGGCGACTTTGC CGTGGAAGAAGCAAGCCTGGTGCTGAAACTATGCTTGCTTTGTTCACATCCTCTGCCCAG TGCTCGTCCGGGCATACGGCAAGTCGTGCAGTTGCTAGACGGTGCCATGCCACTCCCAGA GCTATCACAAGCTCACCTAAGCTGTAACATGCTGGCCTTGATGCAAAATCAGATGGGCAA CTCATGCTCTGTTGCGTCGTCGGTAGCTGGTAATATCTCTGACATTCCTCGAGCGAGATG ACCACAAGGTTTTAGTCTCTTCGCTATAGGATTTGACCATAGTGATAGATTACTCGGTGA AAAGGAAATATCGTAGATTACTCTG