Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0639700-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:25665014:25671633:1 gene:Os02g0639700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Region of unknown function DUF1771 domain containing protein. (Os02t0639700-01)
Sequence

ATGGATCTTCGCCATTCACAAACTCCATCCAGTGATGACGAGACAAGGGCACTTAATGCA
TTGCTTGATGCTTTCAGTTCTGCCTTTTCGCTTGATGATATAGCTACGGCATATTGCAGA
GCAAATGGTGATGTCAACAGAGCTGGTGATCTATTGACTGAACTTGAACATCCTATGGCC
AAGAGCAATGAAGTTGACTCAAGTGTTGGGACTATTCATCCCCCAAGTGGTAAGGCAATT
GAAGAAAACAGTACAGAGAGTTCAGGCCAAGCAAAATCTCGGGAAAAAATGCAGAAGTCT
AGTGCTTCATTTGGCACTGTATCCAGTATGTTAGGAAAGGGATCGACCAGGGCTACAGTA
CCTTTGATGAATAGAGCATCAGGAAAGGAAAAACCTCCAATGGTTGAGTTACCAGAGTAC
ATGCGGGACGATTTTAATGGGAAAGTTGATAAATCTGATTCTGCACCAAAGAGAGAGACT
TTGAATAATAGAGATATAGAGGAATTTCTATTTTCTATGCTTGGAGAAGGATTCAAGCTC
AGCATGGACATGATCCGTGAGGTTCTAGGCAGCTGTGGATATGACATTAAGAAGAGCATG
GAGGAACTGATGTCAGTTTCTACAAAAGATACAAGCAAGAAGGCAGAAGACAAACATTAT
ATAGCACAGGATGCAGCAGTAGAATGCTCTTCTACAAAGGGAAGCTGCCTAGAATCACAA
TCCACCTTTAGGAATGGCAGTGCCTATTCTTTGCGAGGCAAGAGACATAGCTCAAGTCAG
ATTTCTCCAGGAGAGTTGCTAGTGTCAATCTTCACTGTACCTGAAAGATCCGAGGAGGAA
CCAATAGGAAAACGATATGAACTGGGTGCAAATCGAAACAGAGTACCAGATCAGAAACCA
GTTGTAGAACCCCTTGAGGACATCTCATCAGAAACTAACTGTTATCCAGTGAAAGTTATC
CTTAGCAAAGAACTAGTTGCACATAATGAGGAAGATTACCAGAACTATCGTAGGGCTGCG
AAGCAGCATTGGGATATGATGAAGCAATACTATGAGAAGGCTGTTGATGCTTTTAGGGAG
GGTAACCAGAAAGAAGTCGAGTATCTTCTTGGGGAAGGGAAACACTATTACATGATGGCT
CGACTGGCTGATGAAAAATCTTCTGCGGAGATTGTCAAGTCGAAAAAAGTAGAGTCAAAG
AATGAGTTGTGTCTTGACCTGCGTGGACAAGATCCAGCCAACGTAGCAAATCTCGTGAGA
CTTCATCTTAGACAGTTGTCTAATATCCCATCTTTTGAGTACTTGAAAGTCATTACTGGT
GCTGAGGATGGCAGTTTCAAATCGGCACAAAGAAGAAGAAAGGTGATGAAGTATCTGGAG
AAGAAATCGATTGTGTGGACTGAAGAGGAATCCAACCCTGGGACCATCCTCATCCCAATT
AATCAGAAGCAGGATCAGCAGGATTAG

Peptide Sequence

PEP ID

Os02t0639700-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:25665014:25671633:1 gene:Os02g0639700 transcript:Os02t0639700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Region of unknown function DUF1771 domain containing protein. (Os02t0639700-01)
Sequence

MDLRHSQTPSSDDETRALNALLDAFSSAFSLDDIATAYCRANGDVNRAGDLLTELEHPMA
KSNEVDSSVGTIHPPSGKAIEENSTESSGQAKSREKMQKSSASFGTVSSMLGKGSTRATV
PLMNRASGKEKPPMVELPEYMRDDFNGKVDKSDSAPKRETLNNRDIEEFLFSMLGEGFKL
SMDMIREVLGSCGYDIKKSMEELMSVSTKDTSKKAEDKHYIAQDAAVECSSTKGSCLESQ
STFRNGSAYSLRGKRHSSSQISPGELLVSIFTVPERSEEEPIGKRYELGANRNRVPDQKP
VVEPLEDISSETNCYPVKVILSKELVAHNEEDYQNYRRAAKQHWDMMKQYYEKAVDAFRE
GNQKEVEYLLGEGKHYYMMARLADEKSSAEIVKSKKVESKNELCLDLRGQDPANVANLVR
LHLRQLSNIPSFEYLKVITGAEDGSFKSAQRRRKVMKYLEKKSIVWTEEESNPGTILIPI
NQKQDQQD

Transcript Sequence

Transcript ID

Os02t0639700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:25665014:25671633:1 gene:Os02g0639700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Region of unknown function DUF1771 domain containing protein. (Os02t0639700-01)
Sequence

TCTCCAGGGTATCCCTGATCCCTCTTCTCGTGAGTTCGCCCGCCCTCGCCCTCGCCCTCG
CCCTCGCCTGGGCCGATCCCCATACATCCCGCGAGCGCGAGCGAGCCGACGCGCCGCCGT
TCGTCCTGCTGCTTCCGCCGCGTCGTGGTGAGCACATCATCCGCCGCCGCCGCCGATCCC
CATCCATCCTTGCGAGCGATCAGGGGCGCCGTCGTGTTCGTCCTGCTGCTTCCGCCGCAT
CCTGGTTCGACAGCATTGTTTGAGGTTCTTTTAAAAGTGTTCTCACCATGGATCTTCGCC
ATTCACAAACTCCATCCAGTGATGACGAGACAAGGGCACTTAATGCATTGCTTGATGCTT
TCAGTTCTGCCTTTTCGCTTGATGATATAGCTACGGCATATTGCAGAGCAAATGGTGATG
TCAACAGAGCTGGTGATCTATTGACTGAACTTGAACATCCTATGGCCAAGAGCAATGAAG
TTGACTCAAGTGTTGGGACTATTCATCCCCCAAGTGGTAAGGCAATTGAAGAAAACAGTA
CAGAGAGTTCAGGCCAAGCAAAATCTCGGGAAAAAATGCAGAAGTCTAGTGCTTCATTTG
GCACTGTATCCAGTATGTTAGGAAAGGGATCGACCAGGGCTACAGTACCTTTGATGAATA
GAGCATCAGGAAAGGAAAAACCTCCAATGGTTGAGTTACCAGAGTACATGCGGGACGATT
TTAATGGGAAAGTTGATAAATCTGATTCTGCACCAAAGAGAGAGACTTTGAATAATAGAG
ATATAGAGGAATTTCTATTTTCTATGCTTGGAGAAGGATTCAAGCTCAGCATGGACATGA
TCCGTGAGGTTCTAGGCAGCTGTGGATATGACATTAAGAAGAGCATGGAGGAACTGATGT
CAGTTTCTACAAAAGATACAAGCAAGAAGGCAGAAGACAAACATTATATAGCACAGGATG
CAGCAGTAGAATGCTCTTCTACAAAGGGAAGCTGCCTAGAATCACAATCCACCTTTAGGA
ATGGCAGTGCCTATTCTTTGCGAGGCAAGAGACATAGCTCAAGTCAGATTTCTCCAGGAG
AGTTGCTAGTGTCAATCTTCACTGTACCTGAAAGATCCGAGGAGGAACCAATAGGAAAAC
GATATGAACTGGGTGCAAATCGAAACAGAGTACCAGATCAGAAACCAGTTGTAGAACCCC
TTGAGGACATCTCATCAGAAACTAACTGTTATCCAGTGAAAGTTATCCTTAGCAAAGAAC
TAGTTGCACATAATGAGGAAGATTACCAGAACTATCGTAGGGCTGCGAAGCAGCATTGGG
ATATGATGAAGCAATACTATGAGAAGGCTGTTGATGCTTTTAGGGAGGGTAACCAGAAAG
AAGTCGAGTATCTTCTTGGGGAAGGGAAACACTATTACATGATGGCTCGACTGGCTGATG
AAAAATCTTCTGCGGAGATTGTCAAGTCGAAAAAAGTAGAGTCAAAGAATGAGTTGTGTC
TTGACCTGCGTGGACAAGATCCAGCCAACGTAGCAAATCTCGTGAGACTTCATCTTAGAC
AGTTGTCTAATATCCCATCTTTTGAGTACTTGAAAGTCATTACTGGTGCTGAGGATGGCA
GTTTCAAATCGGCACAAAGAAGAAGAAAGGTGATGAAGTATCTGGAGAAGAAATCGATTG
TGTGGACTGAAGAGGAATCCAACCCTGGGACCATCCTCATCCCAATTAATCAGAAGCAGG
ATCAGCAGGATTAGGTTCATGTACAAAGGTGGTGGCTCTCAGTGACAAACTGACAGAAGT
CGATGTTCATAGCTGCGGCATCATTGATGTCCATTTTGAACCTTACTACAGTAGTTCTTT
CCCTTCTCCTTTTGGGTATTTGAACTGTGGAAGTTACGTGCACTGCATTCGTTTTGTCTG
CACATTGCAGACATTTCGAACTCATTATTGCCACCTCGCTAGTGCCAGAAGGAAGAAAGA
ACTGAGGCCATGGTCCGACAGAAATGCAGCAGTACTAGTACTAGTAGTAACATTCTTGTC
ATCTCTAGCATCGTGTCACTACTTAACAGCGTCCGCTCGGCAGATGAATGGTCTCACTTG
TTTAACACTGATGTGCGCAAAATGGCATGCTGCATCTCTGCAAAATGAGTCATCGATTC