Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0636300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:25510882:25513587:-1 gene:Os02g0636300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 47A description:DEAD-like helicase, N-terminal domain containing protein. (Os02t0636300-01)
Sequence	ATGCGGCTAACTGTTGGCCAAGTGCATCGACATGTACTTGCATTGGCATCTTCTCGGTCA TGCTTCGTCCTTGGTGATCACCTTCCATTCAGAATGCTTTCACTTCCACGAGTGGTAAGA TTTCACCAAACCGCTTGGCATGATATTCAAACTGTGGAAGATAAGAGTGGTCCGCTAACT CTAGCTAGTCTTGAAGTGCAAAACAAAGTTGAATATGTTAAGAAAGAAAGAGCAACACGT ACTGGAGGCATAAAGCCATCTTCAAGGGCTTCAGCTCTTAATATGAAACCAAAAGTTTCT TCATTCAATGCCAAACCAGTAAAGAGTGCCTTGCCGAAATCAGCAGTACTGAAGAAGACT CTGAAGATAGATGAATCTCTTTTTTCTGCAAAATCATTTGAAGAACTCGGTTTGCCACCT TTGCTTATAGATAGGTTGAACAAGGAAGGTCTTACTGCTCCAACTGAGGTCCAGTCTGCT GCTATTCCTATCATTTCACAAAAGCACGATGCAGTTATCCAATCATATACTGGCTCAGGG AAGACACTTGCTTATCTTCTCCCTATTCTTTCTGAAATAGGCCCTCTGAAGAGGCCTACA GAACAAGACAGTTCTGATAAGAGATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCTAGA GAATTAGGAATGCAAATAGTGCGAGAAGTGGAGAAGATATTGGGCCCTAATGATAAGAGA CTTGTCCAACAACTTGTTGGTGGTGCTAATCGTTCGAGGCAAGAAGAAGCATTGAAGAAG AACAAGCCAATTATTGTTGTTGGGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGC AAGCTACACACCCACAGTTGCCGCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCT TTCAATTATCGTGAAGATATGCATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACT TCATCTAGAGATATTCTTGGCCCTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTT TCCGCAACGATACCATTTTCAGTTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTC CTTGTTAGAGCTATGAGTGTTGTTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTG TCCCAGCCAGATGCCAACTCCAACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGAC AGCTTACCACCATCTTTGGAACATTACTATTGTACATCCAAGGCTCAACACAAAGTGGAC ACTTTAAGGAGATGTATCCATGCTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAAC ACCAAGCCATTGAAGGATGTTGTATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAA CTACATGGAGATCTTGGAAAGCTTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGT GAATTCAGAGTTCTAGTTACAAATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGT GACCTTGTGATTAATCTGGATCTTCCAACAGACTCAACACACTATGCCCACAGAGCTGGC CGAACTGGCCGTCTAGGGCGGAAAGGAACTGTGGTCACAATATGTGAAGAAACCGAAACA TTTGTTGTAAGGAAAATGCGCAAGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACC GAAGGGAAGCTTCTTGTTCATAAGGAGGAAGATGTAGAGTAA

Peptide Sequence

PEP ID	Os02t0636300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:25510882:25513587:-1 gene:Os02g0636300 transcript:Os02t0636300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 47A description:DEAD-like helicase, N-terminal domain containing protein. (Os02t0636300-01)
Sequence	MRLTVGQVHRHVLALASSRSCFVLGDHLPFRMLSLPRVVRFHQTAWHDIQTVEDKSGPLT LASLEVQNKVEYVKKERATRTGGIKPSSRASALNMKPKVSSFNAKPVKSALPKSAVLKKT LKIDESLFSAKSFEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSG KTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKR LVQQLVGGANRSRQEEALKKNKPIIVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLLS FNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPV LVRAMSVVPLESITVPRPVLSQPDANSNSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVD TLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDG EFRVLVTNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETET FVVRKMRKQLAVPIKPCEFTEGKLLVHKEEDVE

Transcript Sequence

Transcript ID	Os02t0636300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:25510882:25513587:-1 gene:Os02g0636300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 47A description:DEAD-like helicase, N-terminal domain containing protein. (Os02t0636300-01)
Sequence	AGACGAACGTCAGCTAGCCGCCGGCTTCAGGCTAAGCCCTAAACCCGCGTCTCCCCCCTC TCCGAGTCTCCGGCGCGGAGTATCCGTCCGCCCCGCGCGCAGGTGCAGCTCGCCGGCTGG GGCTCGGAGCCAAGAGCATCCCCTCGGGAATTTGTGATATTAGTTGGAAGGAAGGATATT TGGCTGTGGTAAAACTGGTATTGATAAATAGAGCACAGATGCGGCTAACTGTTGGCCAAG TGCATCGACATGTACTTGCATTGGCATCTTCTCGGTCATGCTTCGTCCTTGGTGATCACC TTCCATTCAGAATGCTTTCACTTCCACGAGTGGTAAGATTTCACCAAACCGCTTGGCATG ATATTCAAACTGTGGAAGATAAGAGTGGTCCGCTAACTCTAGCTAGTCTTGAAGTGCAAA ACAAAGTTGAATATGTTAAGAAAGAAAGAGCAACACGTACTGGAGGCATAAAGCCATCTT CAAGGGCTTCAGCTCTTAATATGAAACCAAAAGTTTCTTCATTCAATGCCAAACCAGTAA AGAGTGCCTTGCCGAAATCAGCAGTACTGAAGAAGACTCTGAAGATAGATGAATCTCTTT TTTCTGCAAAATCATTTGAAGAACTCGGTTTGCCACCTTTGCTTATAGATAGGTTGAACA AGGAAGGTCTTACTGCTCCAACTGAGGTCCAGTCTGCTGCTATTCCTATCATTTCACAAA AGCACGATGCAGTTATCCAATCATATACTGGCTCAGGGAAGACACTTGCTTATCTTCTCC CTATTCTTTCTGAAATAGGCCCTCTGAAGAGGCCTACAGAACAAGACAGTTCTGATAAGA GATCAGGTGTAGAGGCAGTTATTGTTGCTCCTTCTAGAGAATTAGGAATGCAAATAGTGC GAGAAGTGGAGAAGATATTGGGCCCTAATGATAAGAGACTTGTCCAACAACTTGTTGGTG GTGCTAATCGTTCGAGGCAAGAAGAAGCATTGAAGAAGAACAAGCCAATTATTGTTGTTG GGACACCTGGTCGTATTTCTGAAATTTCAGCAGCCGGCAAGCTACACACCCACAGTTGCC GCTTTCTTGTACTGGATGAAGTTGACCAGCTTTTGTCTTTCAATTATCGTGAAGATATGC ATAGAATACTTGAACATGTAGGAAGGAAATCGGGTACTTCATCTAGAGATATTCTTGGCC CTCTTGCAAGGCGGTCTGAGCGCCAGACTATCTTGGTTTCCGCAACGATACCATTTTCAG TTATACGAGCAGCCAGGAGTTGGGGTCACGATCCAGTCCTTGTTAGAGCTATGAGTGTTG TTCCACTTGAGTCAATTACTGTTCCAAGACCTGTGCTGTCCCAGCCAGATGCCAACTCCA ACTCTCCATCAAATTCAGTGAATCAAGCTGCAGTTGACAGCTTACCACCATCTTTGGAAC ATTACTATTGTACATCCAAGGCTCAACACAAAGTGGACACTTTAAGGAGATGTATCCATG CTCTGGAGGCTCAGACAGTAATTGCATTTATGAACAACACCAAGCCATTGAAGGATGTTG TATTTAAGTTGGAGGCCCGTGGGATGAAAGCTACTGAACTACATGGAGATCTTGGAAAGC TTGCAAGGTCAACTGTCTTGAAAAAGTTCAAGGATGGTGAATTCAGAGTTCTAGTTACAA ATGAGTTGTCTGCCAGAGGACTGGATGTGCCAGAATGTGACCTTGTGATTAATCTGGATC TTCCAACAGACTCAACACACTATGCCCACAGAGCTGGCCGAACTGGCCGTCTAGGGCGGA AAGGAACTGTGGTCACAATATGTGAAGAAACCGAAACATTTGTTGTAAGGAAAATGCGCA AGCAATTAGCTGTACCCATCAAGCCATGTGAATTCACCGAAGGGAAGCTTCTTGTTCATA AGGAGGAAGATGTAGAGTAAACTATGCATTGTTCAAATGAATTCATCGAATGGCATTTTC ATAGATTGTATTTTCTTTAAATGTTGTCAATTAATGTTTTTTGGTCGATGCAAAGATTCA GATAGAAGGAATGGTTGTTATCCTGGAAACTTTTTCCTCACGGGGAGTTGGTACTCCTCG GATCTATTATATATTTCTGTTGTCACCTTCCTATGGAGATGTACTGTAATGTGTAAAATG ACTCCAAGAAATTACAGTATATGCTAGCATTTCAC