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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0635800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:25497325:25498429:1 gene:Os02g0635800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 7 description:Transcription factor, TCP domain containing protein. (Os02t0635800-01)
Sequence

ATGAGCTCCCGCGACGCCGCCGCCACGTTCCATGTCTACCAGCCCGTGCAGATCCCGACG
GCCACGGTGGCGCCCGCTGCGGCAGTGTCGGCGGCGCCGGCAGAGGCCGTCGCCCAGCTG
GTCCCGGCGCCGAGCAAGAAGGCGGCCGGCGCGGCGGGTGGGAAGGACCGGCACAGCAAG
GTGAACGGGCGCGGGCGGCGCGTGCGGATGCCGATCGTGTGCGCGGCGCGGGTGTTCCAG
CTCACGCGGGAGCTGGGGCTCAAGTCCGACGGCCAGACCATCGAGTGGCTGCTCCGCCAG
GCCGAGCCGTCCATCCTCGCCGCCACGGGGACCGGCACCACCCCGGCCGCCTTCGTCTCC
TCCTCCGCGCCGTCCACCTCCTCCTCGCACCAGCACACCCTCCTCGGCAAGCGCCAGCGC
CAGGAGTCCGCCGCCGCCGACGCCGTCTCCGTCGCCGGCGCCGCGTCCGCGTTCTGGGCG
GCGCTGCCCGCACCAGGCCGGCCCGACGCCTGGGGCTTCTCCCCGCTGGACGCGCAGCCG
ACGTACGTGCCGATGGCGCAGGCGCACCACCACCACCTCAACCTCCTCGCCGCGCTCTCC
GGCGCCGCCAGGCGCGCCGAGGAGGAGTCCCGGTGA

Peptide Sequence

PEP ID

Os02t0635800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:25497325:25498429:1 gene:Os02g0635800 transcript:Os02t0635800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 7 description:Transcription factor, TCP domain containing protein. (Os02t0635800-01)
Sequence

MSSRDAAATFHVYQPVQIPTATVAPAAAVSAAPAEAVAQLVPAPSKKAAGAAGGKDRHSK
VNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGTGTTPAAFVS
SSAPSTSSSHQHTLLGKRQRQESAAADAVSVAGAASAFWAALPAPGRPDAWGFSPLDAQP
TYVPMAQAHHHHLNLLAALSGAARRAEEESR

Transcript Sequence

Transcript ID

Os02t0635800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:25497325:25498429:1 gene:Os02g0635800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 7 description:Transcription factor, TCP domain containing protein. (Os02t0635800-01)
Sequence

ATCACCTCAAAACCTCTCAAACCCCACAGGCACCGGACCACCACCACCATTGGCACCACC
TCGCATCACACTCTCTCGCTCGCCATGAGCTCCCGCGACGCCGCCGCCACGTTCCATGTC
TACCAGCCCGTGCAGATCCCGACGGCCACGGTGGCGCCCGCTGCGGCAGTGTCGGCGGCG
CCGGCAGAGGCCGTCGCCCAGCTGGTCCCGGCGCCGAGCAAGAAGGCGGCCGGCGCGGCG
GGTGGGAAGGACCGGCACAGCAAGGTGAACGGGCGCGGGCGGCGCGTGCGGATGCCGATC
GTGTGCGCGGCGCGGGTGTTCCAGCTCACGCGGGAGCTGGGGCTCAAGTCCGACGGCCAG
ACCATCGAGTGGCTGCTCCGCCAGGCCGAGCCGTCCATCCTCGCCGCCACGGGGACCGGC
ACCACCCCGGCCGCCTTCGTCTCCTCCTCCGCGCCGTCCACCTCCTCCTCGCACCAGCAC
ACCCTCCTCGGCAAGCGCCAGCGCCAGGAGTCCGCCGCCGCCGACGCCGTCTCCGTCGCC
GGCGCCGCGTCCGCGTTCTGGGCGGCGCTGCCCGCACCAGGCCGGCCCGACGCCTGGGGC
TTCTCCCCGCTGGACGCGCAGCCGACGTACGTGCCGATGGCGCAGGCGCACCACCACCAC
CTCAACCTCCTCGCCGCGCTCTCCGGCGCCGCCAGGCGCGCCGAGGAGGAGTCCCGGTGA
ATCACGCACAGCAGCATGCATCTTCCGAGCTCTGACACGTCTTTCGCTCAATTCACCGAC
GCGTACTGCACTGGCGTCCGTACGCCTTGTTCTTGGGACAGTTCTTGATTGGAGTGTGCT
TCTTCTCTCTACCCCGTGGATCGATCGTTTTGCCTTCTTCCTGTGCGGTTCATCAATTGC
TCAAGATGAAATTAATTGTTGCTGTGGTGTTTAAGCTCAAAACTGTAAATACGAGTCCTT
AGATCTCATCTTACTCCTACAAATTCCAGCGCCGCATGTGTTTGTGTGTTTGCCACTTGT
TTCCAGCTCTTGTGCTATGATTCCATGGAACTTGTTTCAGTTTAGCTTCATCTACATCGT
TGTCAGACCAAATCATTTGACAGTT