Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0633400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:25404464:25408368:-1 gene:Os02g0633400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:REPLICATION PROTEIN A 2B description:Similar to 61 kDa protein homolog. (Os02t0633400-01)
Sequence

ATGTACGGCGTCGGCGTCGGCGGCGGCGGCGGCGGGAACTACGATGGCGGGGGAGGGAAC
GCCAGCTCCCTCTTCGGCGGCGGCGGATTCATGCCCTCGCAGGCGACCAACGCCGCGGAG
GGGACCAGCGGCGGCGGCGGCGGCTTCCCCAAGAGTCGGAACGCCCAGGCGCTGCTCCCG
CTCACCGTGAAGCAGATCATGGACGCGTCCCAGACCAACGACGACAAGTCGAATTTTGCT
GTCAATGGCATGGAGGTGTCCACGGTTAGGCTTGTAGGACGCATGTTAAATAAGCTTGAT
CGGGTTACGGATGTATCATTCACTCTTGATGATGGTACAGGCAGGGTACCTGTGAATCGC
TGGGAAAACGATAGCACTGATACTAAGGAGATGGCTGACATTCAGAATGGTGACTATGTT
ATTGTCAATGGTGGTCTAAAAGGTTTTCAAGGGAAGCGTCAGGTGGTTGCTTACTCTGTG
AGGCGTATAACCAACTTCAATGATGTAACACATCACTTTCTTCACTGCGTTCATGTGCAC
TTGGAGCTTACCAGGCCGAAGTCCCAAGTAAATGCTAATACAGCAACAGGAACTCCTAAC
CAAACTATGCCTAGGGATAGCATGGCGTATAACCAAAGTCCACTTACTAATCAGGCCTCA
ACATTTTCTGCACCACAAAATACTGGTACTGGAACAAATATGATCGACTTGGTCTTGAAT
GTTTTTCATGACCCAGCAGTTATGAATGATGACCATGGAGTAGGCGTAGATTATGTGAGC
CGTCGTCTTAATCTACCAGAGGAAACAGTCGGGAAAATCATTATAGACCAAGTTGATCTG
GGACATTTGTATGCCACTATCGATGACCACCATTACAAGTCCACAATGAATGGTTGA

Peptide Sequence

PEP ID

Os02t0633400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:25404464:25408368:-1 gene:Os02g0633400 transcript:Os02t0633400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:REPLICATION PROTEIN A 2B description:Similar to 61 kDa protein homolog. (Os02t0633400-01)
Sequence

MYGVGVGGGGGGNYDGGGGNASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLP
LTVKQIMDASQTNDDKSNFAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNR
WENDSTDTKEMADIQNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVH
LELTRPKSQVNANTATGTPNQTMPRDSMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLN
VFHDPAVMNDDHGVGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYKSTMNG

Transcript Sequence

Transcript ID

Os02t0633400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:25404464:25408368:-1 gene:Os02g0633400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:REPLICATION PROTEIN A 2B description:Similar to 61 kDa protein homolog. (Os02t0633400-01)
Sequence

GCCGAAAAACTGAACCGCCGCAGCCGCACTCCTCTCCCGCGCTCATCCGTTCGTCTGTCG
TCTGTTCCGGTTGCTTTGGCGGGCAGCTAGGGTTTAGGCGCGGGGCCCTCCCGAATCCCC
GATGTACGGCGTCGGCGTCGGCGGCGGCGGCGGCGGGAACTACGATGGCGGGGGAGGGAA
CGCCAGCTCCCTCTTCGGCGGCGGCGGATTCATGCCCTCGCAGGCGACCAACGCCGCGGA
GGGGACCAGCGGCGGCGGCGGCGGCTTCCCCAAGAGTCGGAACGCCCAGGCGCTGCTCCC
GCTCACCGTGAAGCAGATCATGGACGCGTCCCAGACCAACGACGACAAGTCGAATTTTGC
TGTCAATGGCATGGAGGTGTCCACGGTTAGGCTTGTAGGACGCATGTTAAATAAGCTTGA
TCGGGTTACGGATGTATCATTCACTCTTGATGATGGTACAGGCAGGGTACCTGTGAATCG
CTGGGAAAACGATAGCACTGATACTAAGGAGATGGCTGACATTCAGAATGGTGACTATGT
TATTGTCAATGGTGGTCTAAAAGGTTTTCAAGGGAAGCGTCAGGTGGTTGCTTACTCTGT
GAGGCGTATAACCAACTTCAATGATGTAACACATCACTTTCTTCACTGCGTTCATGTGCA
CTTGGAGCTTACCAGGCCGAAGTCCCAAGTAAATGCTAATACAGCAACAGGAACTCCTAA
CCAAACTATGCCTAGGGATAGCATGGCGTATAACCAAAGTCCACTTACTAATCAGGCCTC
AACATTTTCTGCACCACAAAATACTGGTACTGGAACAAATATGATCGACTTGGTCTTGAA
TGTTTTTCATGACCCAGCAGTTATGAATGATGACCATGGAGTAGGCGTAGATTATGTGAG
CCGTCGTCTTAATCTACCAGAGGAAACAGTCGGGAAAATCATTATAGACCAAGTTGATCT
GGGACATTTGTATGCCACTATCGATGACCACCATTACAAGTCCACAATGAATGGTTGATC
GTATTCAATATTATACGTATGCTTCACAGCTTCAAGGTCGCATGGAGCCAAGAAATGTGT
GCACTCCGCGAGAGTAGTTACTGCAGAGTGCCTCGCGTGATTTTTCTACAGGAGATCACC
AGGCAATCAGCTTAACTGTTCAATTAAGTTGTTTATCTAAATAACTACTCCCTTGGCAGT
CAGGCGAGTAGCTTGATAGCATGTTAGATCTTTAGGAGCTTCTTTTGTGTTTCAAACAAC
TATGAACGTGTTTGCAATTGAAGCATCTTATTTTCTTATGACAGTACAGGCAAAGTTACT
C