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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0631100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:25239748:25241280:1 gene:Os02g0631100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II oxygen evolving complex protein PsbQ family protein. (Os02t0631100-01)
Sequence

ATGGACCGAGGGGTGGAGCTGATGGGGTGCGTCTGCCGGATCAAGAACTGCGCCGTCGAG
CTCCTGGAGATGGAGGAGGATCTGGTGATTGGCATGGACGACGACGACAGGGACCTGTTC
TGGAGTGAGCTCCAGCTGAAGACCACCTTCCTTTACATTGATCTGAGCCGGGTGATCTCC
TCCAGCGAGAGCGATGAGCGCAGGGAGGCGCTCACCCTGCTCACCAACAAGCTCTTCTAC
TTCTTGGAGGAGCTGACCGACGCGGTGACGAGCGGAAGCGTCTCCTTCACGAAGCTGTGC
TACGGCGACGCCGCTCAGGCTCTCCGTGAGGTGGTCGCCTTCCTCGCGCCGCCGCAGTAG

Peptide Sequence

PEP ID

Os02t0631100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:25239748:25241280:1 gene:Os02g0631100 transcript:Os02t0631100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II oxygen evolving complex protein PsbQ family protein. (Os02t0631100-01)
Sequence

MDRGVELMGCVCRIKNCAVELLEMEEDLVIGMDDDDRDLFWSELQLKTTFLYIDLSRVIS
SSESDERREALTLLTNKLFYFLEELTDAVTSGSVSFTKLCYGDAAQALREVVAFLAPPQ

Transcript Sequence

Transcript ID

Os02t0631100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:25239748:25241280:1 gene:Os02g0631100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II oxygen evolving complex protein PsbQ family protein. (Os02t0631100-01)
Sequence

GATGCACATGCTGACATCTGTTGCTTCTAGACATGCTCCAAGAATCAGTTTCTTTTTTCG
CCTTTCCATAAACACATCCACATCGCTCACTCTGATCCTTTGTCATCAGGCAACGCTTTG
CAGCAGCAGCAAATGGACCGAGGGGTGGAGCTGATGGGGTGCGTCTGCCGGATCAAGAAC
TGCGCCGTCGAGCTCCTGGAGATGGAGGAGGATCTGGTGATTGGCATGGACGACGACGAC
AGGGACCTGTTCTGGAGTGAGCTCCAGCTGAAGACCACCTTCCTTTACATTGATCTGAGC
CGGGTGATCTCCTCCAGCGAGAGCGATGAGCGCAGGGAGGCGCTCACCCTGCTCACCAAC
AAGCTCTTCTACTTCTTGGAGGAGCTGACCGACGCGGTGACGAGCGGAAGCGTCTCCTTC
ACGAAGCTGTGCTACGGCGACGCCGCTCAGGCTCTCCGTGAGGTGGTCGCCTTCCTCGCG
CCGCCGCAGTAGCTATACCCTGGTGGGCTCATGATCCCAGCACTTCACTGCACTGCACTG
CAAATCTGATATGCTCTGAATTCTGAAGGCAGTAGGGAGAGTCAGAGGCACTAGCAAGGC
AAGGAACTTCTAGAAGTGTCTCTAGAAACTCTTGGAGAAGGATGAGTCTATGGCTCCTGT
GTAAGAAGCATGTGAGAAGAACTGAAGCTAGATCACCCGTGTACATGCATGATGAGATCA
TGAGAGCATTGCCTCTCGAGTTTGAAGCAAAGC