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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0629800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:25190487:25191188:1 gene:Os02g0629800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cp-thionin 1, defensin-like 7 description:Similar to Defensin precursor. (Os02t0629800-01)
Sequence

ATGGCTCCGTCTCGTCGCATGGTCGCGTCCGCCTTCCTCCTCCTGGCCATCCTCGTCGCC
ACAGAGATGGGGACGACCAAGGTGGCGGAGGCGAGGCACTGCCTGTCGCAGAGCCACAGG
TTCAAGGGCATGTGCGTGAGCAGCAACAACTGCGCCAACGTGTGCAGGACGGAGAGCTTC
CCCGACGGCGAGTGCAAGTCGCACGGCCTCGAGCGCAAGTGCTTCTGCAAGAAGGTCTGC
TAG

Peptide Sequence

PEP ID

Os02t0629800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:25190487:25191188:1 gene:Os02g0629800 transcript:Os02t0629800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cp-thionin 1, defensin-like 7 description:Similar to Defensin precursor. (Os02t0629800-01)
Sequence

MAPSRRMVASAFLLLAILVATEMGTTKVAEARHCLSQSHRFKGMCVSSNNCANVCRTESF
PDGECKSHGLERKCFCKKVC

Transcript Sequence

Transcript ID

Os02t0629800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:25190487:25191188:1 gene:Os02g0629800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cp-thionin 1, defensin-like 7 description:Similar to Defensin precursor. (Os02t0629800-01)
Sequence

AACCAAGAGCTAGCACAGCACCGGTGGCAGTAGCAAAGTAGCAGCCTCATCACTCATCAG
TGAGCGCAGTTCGAGTCGCCGGTACAGATGGCTCCGTCTCGTCGCATGGTCGCGTCCGCC
TTCCTCCTCCTGGCCATCCTCGTCGCCACAGAGATGGGGACGACCAAGGTGGCGGAGGCG
AGGCACTGCCTGTCGCAGAGCCACAGGTTCAAGGGCATGTGCGTGAGCAGCAACAACTGC
GCCAACGTGTGCAGGACGGAGAGCTTCCCCGACGGCGAGTGCAAGTCGCACGGCCTCGAG
CGCAAGTGCTTCTGCAAGAAGGTCTGCTAGTGCATGCTAGCCCCGCTGTCTCTGCAGTCG
CATTGCTCGTCGGCTGTGTATCTGCAGAGATTGTAGTCGCGTGTTCTCCTTTGTCTGTTG
TTCATGACGAGCTTCTGTTCTTGGCTTACAGGCTAGTTGAGTTGCTTTCGATTATCCTTG
CTTAGAATAAGTAATAAGTACGCGCTGGATACATGCTCCAGCTTAGTTAGTTGTTGGGTA
TTTGCAAGCTGCTGTCATGTAAGGTTCCACATTTCAGCATTAATGAATTGGCATACGTGA
TG