Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0629400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:25176174:25179701:-1 gene:Os02g0629400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase). (Os02t0629400-01)
Sequence	ATGGTGTGTTCCTTGATGATGCAACTCACCACCACATGGCCATGGCGTTTCTTTTTCTGC TTGTTTTTCCACCTGCTGTTCCTCTTCCCAACCAACTCCTTGAATCAAAGCTACTGTGAC CCTGGTGATGCTAGTGCACTGCTGGGCTTCATGCAAGGTCTCAGCGGAAGCGGCAGCGGC TGGACGGTCCCAAATGCCACTTCTGAAACAGCCAATTGCTGTGCTTGGCTTGGAGTCAAG TGCAACGATGGTGGCCGGGTCATCGGGCTGGACCTCCAAGGCATGAAGCTAAGGGGCGAG CTGGCAGTCTCGCTCGGGCAGCTGGACCAGCTCCAGTGGCTCAACCTGTCCAGCAACAAC CTCCATGGGGCCGTCCCGGCAACCCTGGTCCAGCTCCAGAGGCTACAACGTCTTGATCTT AGCGACAATGAGTTCTCTGGTGAATTCCCGACCAACGTGTCTCTCCCAGTGATTGAGGTC TTCAATATATCCCTCAACTCATTCAAAGAACAGCATCCCACGCTCCATGGTTCAACGCTC CTTGCCATGTTTGATGCGGGGTACAACATGTTCACAGGGCACATTGATACCAGCATCTGC GATCCAAATGGAGTGATCCGTGTTCTCCGGTTCACGTCGAATCTCCTATCTGGGGAGTTC CCAGCAGGGTTTGGGAACTGCACAAAGCTCGAGGAGCTATATGTTGATCTAAATAGCATC ACTGGGAGCTTGCCAGATGATCTTTTCAGGCTGTCTTCGCTGAGGGACCTGTCTCTGCAG GAGAATCAGCTCTCTGGTAGGATGACACCAAGGTTTGGTAATATGTCTAGCCTTTCTAAG CTGGACATATCTTTCAATTCATTCTCTGGATACCTTCCAAATGTTTTTGGTAGCCTTGGC AAGCTTGAGTATTTCTCTGCACAGTCTAACTTATTCAGGGGTCCGTTGCCTTCATCACTG TCCCATTCACCATCACTGAAGATGTTGTACCTGAGAAACAATTCATTCCATGGACAGATC GATCTCAATTGCTCGGCAATGTCACAATTGAGCTCACTTGATCTTGGCACAAATAAGTTC ATCGGCACAATAGATGCTTTGTCAGATTGCCATCATCTGAGAAGCCTGAATCTTGCCACA AACAACCTCACTGGTGAAATCCCTAATGGTTTCAGGAATCTTCAGTTTCTAACCTATATC TCACTTTCAAACAATAGCTTCACAAATGTGTCCTCAGCATTATCTGTCCTTCAAGGCTGC CCAAGCCTAACAAGCCTCGTGCTGACAAAGAATTTCAATGATGGGAAGGCCTTGCCGATG ACTGGAATAGATGGTTTTCATAACATCCAAGTGTTTGTCATTGCTAATAGCCATCTTTCA GGATCAGTACCTTCATGGGTAGCAAACTTCGCACAATTGAAAGTGCTGGATTTGTCATGG AATAAATTGTCTGGGAACATCCCTGCATGGATTGGCAATCTCGAGCATTTGTTTTATTTG GATCTTTCTAATAATACACTGTCTGGAGGAATTCCGAACAGTCTAACAAGCATGAAGGGC CTTCTTACATGCAACAGCTCACAGCAATCCACAGAAACTGACTATTTTCCTTTCTTCATT AAAAAGAACAGGACAGGCAAAGGGCTACGGTACAATCAGGTTAGCAGTTTCCCGCCCTCC CTAATTCTCAGCCACAACATGCTCATAGGTCCCATATTGCCAGGCTTTGGGAACCTTAAG AACCTGCATGTCTTGGACCTCAGTAACAACCATATTTCTGGTATGATTCCTGATGAGCTA TCAGGCATGTCGAGCTTGGAATCCTTGGATTTGTCACATAATAATCTTACTGGAAGCATT CCTTCTTCATTAACAAAGCTGAATTTTCTATCGAGCTTCAGTGTGGCATTCAATAATCTA ACTGGTGCAATTCCATTAGGAGGGCAATTCTCAACATTCACAGGTTCTGCTTATGAGGGG AACCCCAAACTCTGTGGCATCCGCTCTGGCTTAGCACTATGCCAGTCATCTCATGCTCCT ACCATGTCTGTAAAGAAGAATGGAAAGAACAAGGGTGTCATATTAGGAATAGCTATTGGC ATTGCACTTGGAGCAGCATTTGTGTTGTCTGTTGCTGTTGTACTTGTGTTGAAGAGTAGC TTTAGAAGGCAGGACTATATAGTTAAGGCTGTTGCAGATACAACTGAAGCTCTCGAGTTA GCACCAGCTTCATTGGTTCTTTTGTTTCAGAACAAGGATGACGGCAAGGCAATGACTATT GGTGACATATTGAAATCTACAAACAACTTTGATCAGGCAAACATCATTGGTTGTGGTGGC TTTGGTCTAGTGTACAAGGCAACACTACCAGATGGAGCAACGATTGCCATCAAAAGACTG TCAGGCGATTTTGGCCAGATGGAGCGTGAGTTCAAAGCCGAGGTGGAGACTTTATCAAAA GCTCAACATCCTAATCTTGTACTTCTGCAAGGTTATTGCAGGATTGGCAATGATAGGCTA CTGATCTACTCTTACATGGAGAATGGTAGCCTAGACCATTGGCTTCATGAAAAGCCTGAT GGTCCATCTAGATTAAGTTGGCAAACAAGGCTTCAGATAGCAAAAGGAGCGGCGAGAGGT TTAGCGTACCTGCACTTGTCATGCCAACCCCATATACTCCACCGTGATATCAAGTCAAGC AACATACTTTTAGATGAGGATTTCGAAGCTCATTTGGCTGATTTTGGGCTTGCTCGGCTT ATTTGTCCCTATGATACACATGTAACAACTGATCTAGTTGGCACACTAGGCTACATCCCC CCTGAGTACGGCCAATCTTCAGTAGCCAATTTCAAAGGTGATGTTTATAGTTTTGGCATT GTTCTTTTAGAGTTATTAACTGGAAAGAGGCCTGTAGATATGTGCAAGCCAAAGGGAGCT CGGGAGTTGGTCTCATGGGTTTTGCATATGAAAGAAAAAAACTGTGAAGCTGAAGTATTG GACCGTGCAATGTATGACAAGAAGTTTGAGATGCAAATGGTGCAGATGATCGATATTGCC TGTTTGTGCATAAGTGAGTCACCAAAACTGAGGCCTCTAACTCATGAACTTGTACTATGG CTTGACAACATTGGTGGTAGCACTGAAGCGACAAAGTGA

Peptide Sequence

PEP ID	Os02t0629400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:25176174:25179701:-1 gene:Os02g0629400 transcript:Os02t0629400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase). (Os02t0629400-01)
Sequence	MVCSLMMQLTTTWPWRFFFCLFFHLLFLFPTNSLNQSYCDPGDASALLGFMQGLSGSGSG WTVPNATSETANCCAWLGVKCNDGGRVIGLDLQGMKLRGELAVSLGQLDQLQWLNLSSNN LHGAVPATLVQLQRLQRLDLSDNEFSGEFPTNVSLPVIEVFNISLNSFKEQHPTLHGSTL LAMFDAGYNMFTGHIDTSICDPNGVIRVLRFTSNLLSGEFPAGFGNCTKLEELYVDLNSI TGSLPDDLFRLSSLRDLSLQENQLSGRMTPRFGNMSSLSKLDISFNSFSGYLPNVFGSLG KLEYFSAQSNLFRGPLPSSLSHSPSLKMLYLRNNSFHGQIDLNCSAMSQLSSLDLGTNKF IGTIDALSDCHHLRSLNLATNNLTGEIPNGFRNLQFLTYISLSNNSFTNVSSALSVLQGC PSLTSLVLTKNFNDGKALPMTGIDGFHNIQVFVIANSHLSGSVPSWVANFAQLKVLDLSW NKLSGNIPAWIGNLEHLFYLDLSNNTLSGGIPNSLTSMKGLLTCNSSQQSTETDYFPFFI KKNRTGKGLRYNQVSSFPPSLILSHNMLIGPILPGFGNLKNLHVLDLSNNHISGMIPDEL SGMSSLESLDLSHNNLTGSIPSSLTKLNFLSSFSVAFNNLTGAIPLGGQFSTFTGSAYEG NPKLCGIRSGLALCQSSHAPTMSVKKNGKNKGVILGIAIGIALGAAFVLSVAVVLVLKSS FRRQDYIVKAVADTTEALELAPASLVLLFQNKDDGKAMTIGDILKSTNNFDQANIIGCGG FGLVYKATLPDGATIAIKRLSGDFGQMEREFKAEVETLSKAQHPNLVLLQGYCRIGNDRL LIYSYMENGSLDHWLHEKPDGPSRLSWQTRLQIAKGAARGLAYLHLSCQPHILHRDIKSS NILLDEDFEAHLADFGLARLICPYDTHVTTDLVGTLGYIPPEYGQSSVANFKGDVYSFGI VLLELLTGKRPVDMCKPKGARELVSWVLHMKEKNCEAEVLDRAMYDKKFEMQMVQMIDIA CLCISESPKLRPLTHELVLWLDNIGGSTEATK

Transcript Sequence

Transcript ID	Os02t0629400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:25176174:25179701:-1 gene:Os02g0629400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase). (Os02t0629400-01)
Sequence	TACTACTGTCGTATCGTCTCCTACCTCGCCTCTCTTTCCTTTTTTCCGTCGATTCACCAT TGTTGCTTGGGGTGCAAGCGCCCAGCAGAGGCCAGTTTTACGCACCAAATGGCTTGCATA TCACATATCTCCTGAAGAAGACCAAACGAGAAGCCATCTTCACTGCCCAGTCCGTGCCCG GCACCATCAGCATAGCTCTTCTTTCTTCTATGGTGTGTTCCTTGATGATGCAACTCACCA CCACATGGCCATGGCGTTTCTTTTTCTGCTTGTTTTTCCACCTGCTGTTCCTCTTCCCAA CCAACTCCTTGAATCAAAGCTACTGTGACCCTGGTGATGCTAGTGCACTGCTGGGCTTCA TGCAAGGTCTCAGCGGAAGCGGCAGCGGCTGGACGGTCCCAAATGCCACTTCTGAAACAG CCAATTGCTGTGCTTGGCTTGGAGTCAAGTGCAACGATGGTGGCCGGGTCATCGGGCTGG ACCTCCAAGGCATGAAGCTAAGGGGCGAGCTGGCAGTCTCGCTCGGGCAGCTGGACCAGC TCCAGTGGCTCAACCTGTCCAGCAACAACCTCCATGGGGCCGTCCCGGCAACCCTGGTCC AGCTCCAGAGGCTACAACGTCTTGATCTTAGCGACAATGAGTTCTCTGGTGAATTCCCGA CCAACGTGTCTCTCCCAGTGATTGAGGTCTTCAATATATCCCTCAACTCATTCAAAGAAC AGCATCCCACGCTCCATGGTTCAACGCTCCTTGCCATGTTTGATGCGGGGTACAACATGT TCACAGGGCACATTGATACCAGCATCTGCGATCCAAATGGAGTGATCCGTGTTCTCCGGT TCACGTCGAATCTCCTATCTGGGGAGTTCCCAGCAGGGTTTGGGAACTGCACAAAGCTCG AGGAGCTATATGTTGATCTAAATAGCATCACTGGGAGCTTGCCAGATGATCTTTTCAGGC TGTCTTCGCTGAGGGACCTGTCTCTGCAGGAGAATCAGCTCTCTGGTAGGATGACACCAA GGTTTGGTAATATGTCTAGCCTTTCTAAGCTGGACATATCTTTCAATTCATTCTCTGGAT ACCTTCCAAATGTTTTTGGTAGCCTTGGCAAGCTTGAGTATTTCTCTGCACAGTCTAACT TATTCAGGGGTCCGTTGCCTTCATCACTGTCCCATTCACCATCACTGAAGATGTTGTACC TGAGAAACAATTCATTCCATGGACAGATCGATCTCAATTGCTCGGCAATGTCACAATTGA GCTCACTTGATCTTGGCACAAATAAGTTCATCGGCACAATAGATGCTTTGTCAGATTGCC ATCATCTGAGAAGCCTGAATCTTGCCACAAACAACCTCACTGGTGAAATCCCTAATGGTT TCAGGAATCTTCAGTTTCTAACCTATATCTCACTTTCAAACAATAGCTTCACAAATGTGT CCTCAGCATTATCTGTCCTTCAAGGCTGCCCAAGCCTAACAAGCCTCGTGCTGACAAAGA ATTTCAATGATGGGAAGGCCTTGCCGATGACTGGAATAGATGGTTTTCATAACATCCAAG TGTTTGTCATTGCTAATAGCCATCTTTCAGGATCAGTACCTTCATGGGTAGCAAACTTCG CACAATTGAAAGTGCTGGATTTGTCATGGAATAAATTGTCTGGGAACATCCCTGCATGGA TTGGCAATCTCGAGCATTTGTTTTATTTGGATCTTTCTAATAATACACTGTCTGGAGGAA TTCCGAACAGTCTAACAAGCATGAAGGGCCTTCTTACATGCAACAGCTCACAGCAATCCA CAGAAACTGACTATTTTCCTTTCTTCATTAAAAAGAACAGGACAGGCAAAGGGCTACGGT ACAATCAGGTTAGCAGTTTCCCGCCCTCCCTAATTCTCAGCCACAACATGCTCATAGGTC CCATATTGCCAGGCTTTGGGAACCTTAAGAACCTGCATGTCTTGGACCTCAGTAACAACC ATATTTCTGGTATGATTCCTGATGAGCTATCAGGCATGTCGAGCTTGGAATCCTTGGATT TGTCACATAATAATCTTACTGGAAGCATTCCTTCTTCATTAACAAAGCTGAATTTTCTAT CGAGCTTCAGTGTGGCATTCAATAATCTAACTGGTGCAATTCCATTAGGAGGGCAATTCT CAACATTCACAGGTTCTGCTTATGAGGGGAACCCCAAACTCTGTGGCATCCGCTCTGGCT TAGCACTATGCCAGTCATCTCATGCTCCTACCATGTCTGTAAAGAAGAATGGAAAGAACA AGGGTGTCATATTAGGAATAGCTATTGGCATTGCACTTGGAGCAGCATTTGTGTTGTCTG TTGCTGTTGTACTTGTGTTGAAGAGTAGCTTTAGAAGGCAGGACTATATAGTTAAGGCTG TTGCAGATACAACTGAAGCTCTCGAGTTAGCACCAGCTTCATTGGTTCTTTTGTTTCAGA ACAAGGATGACGGCAAGGCAATGACTATTGGTGACATATTGAAATCTACAAACAACTTTG ATCAGGCAAACATCATTGGTTGTGGTGGCTTTGGTCTAGTGTACAAGGCAACACTACCAG ATGGAGCAACGATTGCCATCAAAAGACTGTCAGGCGATTTTGGCCAGATGGAGCGTGAGT TCAAAGCCGAGGTGGAGACTTTATCAAAAGCTCAACATCCTAATCTTGTACTTCTGCAAG GTTATTGCAGGATTGGCAATGATAGGCTACTGATCTACTCTTACATGGAGAATGGTAGCC TAGACCATTGGCTTCATGAAAAGCCTGATGGTCCATCTAGATTAAGTTGGCAAACAAGGC TTCAGATAGCAAAAGGAGCGGCGAGAGGTTTAGCGTACCTGCACTTGTCATGCCAACCCC ATATACTCCACCGTGATATCAAGTCAAGCAACATACTTTTAGATGAGGATTTCGAAGCTC ATTTGGCTGATTTTGGGCTTGCTCGGCTTATTTGTCCCTATGATACACATGTAACAACTG ATCTAGTTGGCACACTAGGCTACATCCCCCCTGAGTACGGCCAATCTTCAGTAGCCAATT TCAAAGGTGATGTTTATAGTTTTGGCATTGTTCTTTTAGAGTTATTAACTGGAAAGAGGC CTGTAGATATGTGCAAGCCAAAGGGAGCTCGGGAGTTGGTCTCATGGGTTTTGCATATGA AAGAAAAAAACTGTGAAGCTGAAGTATTGGACCGTGCAATGTATGACAAGAAGTTTGAGA TGCAAATGGTGCAGATGATCGATATTGCCTGTTTGTGCATAAGTGAGTCACCAAAACTGA GGCCTCTAACTCATGAACTTGTACTATGGCTTGACAACATTGGTGGTAGCACTGAAGCGA CAAAGTGAGGCAAATTCTATAATAGCAACCACTGTGGAAATCCATGTGATCAAATTCACC CCCACCCCTTTCTCTTTGTATTAAATTTTCTTCCACAGTGATGTGAGATATTGTGTGACG ATCGTATACAAAATAAGAGTTCCGGGAGTCTATCTAACCTGCTAATTC