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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0628000-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:25109674:25112684:1 gene:Os02g0628000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONELY GUY LIKE PHOSPHORIBOHYDROLASE 2 description:Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2. (Os02t0628000-00)
Sequence

ATGGAAATCAAGGACGAGGAGACAACGGCAGAGGTGGCCATGGTGGTGCAGTCGCGGTTC
AGAAGGGTATGCGTGTTCTGTGGGAGCAGCCATGGCAAGAAGAAGATCTACCAGGATGCT
GCCATTGAACTTGGGAAGGAGCTGGTGGCAAGAAACATTGACCTAGTATATGGAGGAGGG
AGTGTAGGGTTGATGGGTTTGGTTTCTCAAGCAGTACACAATGGAGGAAGGCATGTCATT
GGGGTCATTCCCAAGACTCTCATGCCTAGAGAGATATCAGGTGAGACAGTGGGGGAGGTG
AAAGCAGTGTCCGATATGCACCAGAGGAAGGCTGAGATGGCCAGGCAGTCTGATGCCTTT
ATAGCATTGCCTGGGGGGTATGGAACACTTGAAGAGCTACTAGAAGTAATTGCATGGGCT
CAACTTGGAATTCATGACAAACCGGTTGGGCTGCTCAATGTGGATGGCTACTACAATCCG
TTGCTGTCTTTCATCGACAAAGCTGTGGAGGAAGGGTTCATCAGACCTAGTGCCCGCCAT
ATCATCGTCTTGGCCCCAACGCCTAAAGAACTCATTGAAAAGCTAGAGGAGTACTCTCCC
CAGCACGAGAAAGTCGTGTCAAAGATGAAATGGGAGATGGAACAGATGAGCTACCCTCAG
AACTACGATATCCCCAGGCCAAAGGAGGGAAAGATGATCATAGAAGCACAACGGGGAAGC
AGGCTATGGATGTAA

Peptide Sequence

PEP ID

Os02t0628000-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:25109674:25112684:1 gene:Os02g0628000 transcript:Os02t0628000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONELY GUY LIKE PHOSPHORIBOHYDROLASE 2 description:Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2. (Os02t0628000-00)
Sequence

MEIKDEETTAEVAMVVQSRFRRVCVFCGSSHGKKKIYQDAAIELGKELVARNIDLVYGGG
SVGLMGLVSQAVHNGGRHVIGVIPKTLMPREISGETVGEVKAVSDMHQRKAEMARQSDAF
IALPGGYGTLEELLEVIAWAQLGIHDKPVGLLNVDGYYNPLLSFIDKAVEEGFIRPSARH
IIVLAPTPKELIEKLEEYSPQHEKVVSKMKWEMEQMSYPQNYDIPRPKEGKMIIEAQRGS
RLWM

Transcript Sequence

Transcript ID

Os02t0628000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:25109674:25112684:1 gene:Os02g0628000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LONELY GUY LIKE PHOSPHORIBOHYDROLASE 2 description:Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2. (Os02t0628000-00)
Sequence

ATGGAAATCAAGGACGAGGAGACAACGGCAGAGGTGGCCATGGTGGTGCAGTCGCGGTTC
AGAAGGGTATGCGTGTTCTGTGGGAGCAGCCATGGCAAGAAGAAGATCTACCAGGATGCT
GCCATTGAACTTGGGAAGGAGCTGGTGGCAAGAAACATTGACCTAGTATATGGAGGAGGG
AGTGTAGGGTTGATGGGTTTGGTTTCTCAAGCAGTACACAATGGAGGAAGGCATGTCATT
GGGGTCATTCCCAAGACTCTCATGCCTAGAGAGATATCAGGTGAGACAGTGGGGGAGGTG
AAAGCAGTGTCCGATATGCACCAGAGGAAGGCTGAGATGGCCAGGCAGTCTGATGCCTTT
ATAGCATTGCCTGGGGGGTATGGAACACTTGAAGAGCTACTAGAAGTAATTGCATGGGCT
CAACTTGGAATTCATGACAAACCGGTTGGGCTGCTCAATGTGGATGGCTACTACAATCCG
TTGCTGTCTTTCATCGACAAAGCTGTGGAGGAAGGGTTCATCAGACCTAGTGCCCGCCAT
ATCATCGTCTTGGCCCCAACGCCTAAAGAACTCATTGAAAAGCTAGAGGAGTACTCTCCC
CAGCACGAGAAAGTCGTGTCAAAGATGAAATGGGAGATGGAACAGATGAGCTACCCTCAG
AACTACGATATCCCCAGGCCAAAGGAGGGAAAGATGATCATAGAAGCACAACGGGGAAGC
AGGCTATGGATGTAA