Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0625900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:24953147:24960082:1 gene:Os02g0625900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0625900-01)
Sequence

ATGGAAAAGGGAAGTGAGGAATATATATCGTTTTATGACTCTGAACTAGAAGAAGGTGAG
TTCAGGGAGTGTAGAGCATTTGAGGATCAAACTGTTAAAGTGAGGCAGTTGGCATTGCAT
GGAACATGTTCTGGGGAATACAGTCGAAGTTATTCATCACATGTCAACAGTAGATCAAAT
AAAAGGCACAAACAGAAGGAGCATGACTATTATAAATATTCCGATTATCTACAAGTCTTG
AAAAAGATTGAAAAAGTCAGCTCAAGAAGATTTGATAAACTATTGGTATGGCACAACGAA
GACCGTGAGGAATTCAATGTTGTGCGCAAAAGTCAAGAGTTTGAGTTCTTCCAAGAACAT
CTACGCTCTTATGAAGTCCAGTACACACGAGTTATACCAACAATAAAACGTTGCAGGATG
AAGCTACCAAAGTTACTATTCTCTGTTTTGCACAAGACTTTTCATAAACATTTCCAATCC
CAGCTGATAGAATTTGTGAAACGACAAATAAAAGATAGAGACAAGGATAAGAGAGTAAGA
AACCGCTGGATATTTGAGGCTGAAGCTGGTTACCTTAAGACAGATTTTGACATGATTCCC
TTGTCATATTCTGGGCTTAAGATAGAGAAATTGAAATGCTCTTCGACTGACTATTTAAAT
GGTGATGCACAGCTCAACTACTTTAACATGGAATGTCTATCTACTGAAATTGAAGCTATT
GCTTCTTCAAGTACAAAATCAGAAGAGACCTGTGCAGGCAAGAGAAGCGACACTTCTGAG
CCCATTCTAGACAATTCAGAAGTTCTGCTTGAAATCAATGTATCTACCAAGGATGGGGCT
TCAGTTGGTGCAGCTGAAGAAGTTTTCACCTGTGAAAGGTCTTCACAGTCCACCTGTGGG
CCGACTACAATGGTATTTGGTCAAAATAATGGGAGACAAATTGACTTCCCAGTAGCAGCA
CAAAGTAATGTGGGGGATGCAGAGTTATCCTATGCCTCTCAATCTCACATTAGTGCAGCA
TCAGCACATGCTAATGTTGTGGCTGCTGATTCAGAAAATGCAAACCTGCTTTCCAGAGCA
AAGGGAAGATGTCCAAGTTCAACCTATAATGTTTCGCTAGGTTCCTGCTCTGGGTCTCAG
AGAAAACTCCCATTTGAGTCTGCCTCGAGCCCGTGCGAAACTGCATTGCTTCACAAGGAA
GCCCCATGTGCAGATCACCAGATATCCTTGAACACTGTTTCTCCGCAGGAAGCTCCCTGC
GCAAATCACCAAATATCCTTGGACACTGTTTCTCCGCAGGAAGCTCCATCTGCAAGTCCG
CCTTCAACTAATGTGATTCAGATGGAACAATCTGAGGACATTAGTAATGTGATTCGGGTG
GAACAGTCTGAGGACATTAGAAGTGAGGAAGCGCCTAATGGTCAAGCTTCCTCCTTTGCC
CAAGTTACCGAGCAGCCTAACATGCAAGCAAATACATCAACTTGCCAGGCTGTTACTCAT
CAACCACCTGATGGGAGTATTCATTCGGTTAGAACTGAGTTTATCAACCCTCGAGCATCA
AATATTGAGTCATATTCAGTCAACCAGATTCTAACAAGATCCATCTTTGAGCAACGCCCT
AATGAAGCTGGGTTTCAATCAGATCCCGTTGCTGTTGAGTTGAGTCGGTTACAGATGTTA
CGTTGTCTGATGACCAAGAGACATGAAGAGAAGCGGCAACAAATTATTTTGGCACGTGAA
ATAGAGATGGCTGAAACTAAAAGGAAGTATGATGAGCTGATCCATAAATTGGAGATGGAA
ACATCACAGAGAAAGAAAGGAATTCAAATACTTGCTGACAAAGTCTATAAACGACAAACG
TTGGCTGAGGGATTCCAGACTATGTTTGTTTCACACGGATCAAGAGCCAGGAGAAGCATG
CAGCCTAATCGATCATCAGGTCAGCAGGCTTTGCAGATTCCTGCATCCGTTTCAGCCCCG
GCATCAGCAGTCATGTGTCAACCATCGCAACAGGATGCGCAGTCATCCATGGGCAGTTCA
CCGCGACACCCTTTTGTGACAATAAATCACCATAGCATGGACTATTTGGGCAGATCTGCT
ACTCCCTTGGCTCACAGTCGAGGTGCTGGCATGGGCTCTGGGATTGCGTACCATGCACCA
GAATCCCATCTCCATTCTGTTGTAAATCCATTGCCAGCATCAGGTCTCCAACTTGGGATC
GCGAGCTTGGAACAATAG

Peptide Sequence

PEP ID

Os02t0625900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:24953147:24960082:1 gene:Os02g0625900 transcript:Os02t0625900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0625900-01)
Sequence

MEKGSEEYISFYDSELEEGEFRECRAFEDQTVKVRQLALHGTCSGEYSRSYSSHVNSRSN
KRHKQKEHDYYKYSDYLQVLKKIEKVSSRRFDKLLVWHNEDREEFNVVRKSQEFEFFQEH
LRSYEVQYTRVIPTIKRCRMKLPKLLFSVLHKTFHKHFQSQLIEFVKRQIKDRDKDKRVR
NRWIFEAEAGYLKTDFDMIPLSYSGLKIEKLKCSSTDYLNGDAQLNYFNMECLSTEIEAI
ASSSTKSEETCAGKRSDTSEPILDNSEVLLEINVSTKDGASVGAAEEVFTCERSSQSTCG
PTTMVFGQNNGRQIDFPVAAQSNVGDAELSYASQSHISAASAHANVVAADSENANLLSRA
KGRCPSSTYNVSLGSCSGSQRKLPFESASSPCETALLHKEAPCADHQISLNTVSPQEAPC
ANHQISLDTVSPQEAPSASPPSTNVIQMEQSEDISNVIRVEQSEDIRSEEAPNGQASSFA
QVTEQPNMQANTSTCQAVTHQPPDGSIHSVRTEFINPRASNIESYSVNQILTRSIFEQRP
NEAGFQSDPVAVELSRLQMLRCLMTKRHEEKRQQIILAREIEMAETKRKYDELIHKLEME
TSQRKKGIQILADKVYKRQTLAEGFQTMFVSHGSRARRSMQPNRSSGQQALQIPASVSAP
ASAVMCQPSQQDAQSSMGSSPRHPFVTINHHSMDYLGRSATPLAHSRGAGMGSGIAYHAP
ESHLHSVVNPLPASGLQLGIASLEQ

Transcript Sequence

Transcript ID

Os02t0625900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:24953147:24960082:1 gene:Os02g0625900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0625900-01)
Sequence

CTCCACACCCACGCCCACACACGCAAACACAGAACACACCACCCCGCGCCGCATCGATCG
CTCCCACGACCGACGCGAGCCGCAGCGGCGGCGGAAGCGGTCGGGACCGACGCGGACCCG
TCGATCTCCTCGCGAGCGCGAACCCTCGCCGGAGCCCCTTCCCCGCCGGCGGACTCCCCC
GCGTTCTCTCTCTCTCTCTCTCCTCGCGCCAGGGGAGCGGAGTGAGGCCTAGCTAAGCTC
CGGTTCGTAGGTTTTCTTGTGGTTTGTATCTGTGTGTGGCACAATTAAGGTCCAGCTTAT
TGGTGCCTAGATTTGGAAGTGAAGCACACAATTAATTCGACTGAAGTGAGGTCCTAACTT
TTTCCATCTTTGAGCCAGAAGTTTCAATGAGTCGTCTTCATGGCAATGACATAGGATATC
CAGTTCAGTCACCCTACTGGTTTTAGTAGATATATTATGGGATACTGTTGATACTCGCGA
GGAATCATCTGAATGTAAAAAACTTGAGATGGAAAAGGGAAGTGAGGAATATATATCGTT
TTATGACTCTGAACTAGAAGAAGGTGAGTTCAGGGAGTGTAGAGCATTTGAGGATCAAAC
TGTTAAAGTGAGGCAGTTGGCATTGCATGGAACATGTTCTGGGGAATACAGTCGAAGTTA
TTCATCACATGTCAACAGTAGATCAAATAAAAGGCACAAACAGAAGGAGCATGACTATTA
TAAATATTCCGATTATCTACAAGTCTTGAAAAAGATTGAAAAAGTCAGCTCAAGAAGATT
TGATAAACTATTGGTATGGCACAACGAAGACCGTGAGGAATTCAATGTTGTGCGCAAAAG
TCAAGAGTTTGAGTTCTTCCAAGAACATCTACGCTCTTATGAAGTCCAGTACACACGAGT
TATACCAACAATAAAACGTTGCAGGATGAAGCTACCAAAGTTACTATTCTCTGTTTTGCA
CAAGACTTTTCATAAACATTTCCAATCCCAGCTGATAGAATTTGTGAAACGACAAATAAA
AGATAGAGACAAGGATAAGAGAGTAAGAAACCGCTGGATATTTGAGGCTGAAGCTGGTTA
CCTTAAGACAGATTTTGACATGATTCCCTTGTCATATTCTGGGCTTAAGATAGAGAAATT
GAAATGCTCTTCGACTGACTATTTAAATGGTGATGCACAGCTCAACTACTTTAACATGGA
ATGTCTATCTACTGAAATTGAAGCTATTGCTTCTTCAAGTACAAAATCAGAAGAGACCTG
TGCAGGCAAGAGAAGCGACACTTCTGAGCCCATTCTAGACAATTCAGAAGTTCTGCTTGA
AATCAATGTATCTACCAAGGATGGGGCTTCAGTTGGTGCAGCTGAAGAAGTTTTCACCTG
TGAAAGGTCTTCACAGTCCACCTGTGGGCCGACTACAATGGTATTTGGTCAAAATAATGG
GAGACAAATTGACTTCCCAGTAGCAGCACAAAGTAATGTGGGGGATGCAGAGTTATCCTA
TGCCTCTCAATCTCACATTAGTGCAGCATCAGCACATGCTAATGTTGTGGCTGCTGATTC
AGAAAATGCAAACCTGCTTTCCAGAGCAAAGGGAAGATGTCCAAGTTCAACCTATAATGT
TTCGCTAGGTTCCTGCTCTGGGTCTCAGAGAAAACTCCCATTTGAGTCTGCCTCGAGCCC
GTGCGAAACTGCATTGCTTCACAAGGAAGCCCCATGTGCAGATCACCAGATATCCTTGAA
CACTGTTTCTCCGCAGGAAGCTCCCTGCGCAAATCACCAAATATCCTTGGACACTGTTTC
TCCGCAGGAAGCTCCATCTGCAAGTCCGCCTTCAACTAATGTGATTCAGATGGAACAATC
TGAGGACATTAGTAATGTGATTCGGGTGGAACAGTCTGAGGACATTAGAAGTGAGGAAGC
GCCTAATGGTCAAGCTTCCTCCTTTGCCCAAGTTACCGAGCAGCCTAACATGCAAGCAAA
TACATCAACTTGCCAGGCTGTTACTCATCAACCACCTGATGGGAGTATTCATTCGGTTAG
AACTGAGTTTATCAACCCTCGAGCATCAAATATTGAGTCATATTCAGTCAACCAGATTCT
AACAAGATCCATCTTTGAGCAACGCCCTAATGAAGCTGGGTTTCAATCAGATCCCGTTGC
TGTTGAGTTGAGTCGGTTACAGATGTTACGTTGTCTGATGACCAAGAGACATGAAGAGAA
GCGGCAACAAATTATTTTGGCACGTGAAATAGAGATGGCTGAAACTAAAAGGAAGTATGA
TGAGCTGATCCATAAATTGGAGATGGAAACATCACAGAGAAAGAAAGGAATTCAAATACT
TGCTGACAAAGTCTATAAACGACAAACGTTGGCTGAGGGATTCCAGACTATGTTTGTTTC
ACACGGATCAAGAGCCAGGAGAAGCATGCAGCCTAATCGATCATCAGGTCAGCAGGCTTT
GCAGATTCCTGCATCCGTTTCAGCCCCGGCATCAGCAGTCATGTGTCAACCATCGCAACA
GGATGCGCAGTCATCCATGGGCAGTTCACCGCGACACCCTTTTGTGACAATAAATCACCA
TAGCATGGACTATTTGGGCAGATCTGCTACTCCCTTGGCTCACAGTCGAGGTGCTGGCAT
GGGCTCTGGGATTGCGTACCATGCACCAGAATCCCATCTCCATTCTGTTGTAAATCCATT
GCCAGCATCAGGTCTCCAACTTGGGATCGCGAGCTTGGAACAATAGCTGGGGCTTTTGAT
TCTTCTTCGAAGCTTTCGGGCATGCAGCCCGTAAGGTTACATACAGTGTAACCGTATGTG
TTTCTATGATGACTTTAACTTCTGAGTTTTGCTTAGTGAGAAATAGATCCTACTTAGAAT
CC