Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0625300-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:24934934:24936452:1 gene:Os02g0625300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOENOL PYRUVATE CARBOXYLASE KINASE2 description:Similar to PEPC kinase. (Os02t0625300-00)
Sequence

ATGGAGTTTACCCCCAAAATCACAGGAAAAACTACTAGCATGAGTGGAGAGCTGAAGAGA
GACTACGAGATTGGCGAGGAGATCGGGCGCGGCCGCTTCGGCGTGGTCCACCGCTGCACG
TCGCGCGCCACCGGCGAGGCCTTCGCCGTCAAGTCCGTCGACCGCTCGCAGCTGGCCGAC
GACCTCGACCGGGAGCTCGCGGAGCTCGAGCCCAAGCTGGCCCAGCTGGCCGCCGCGGGC
AACCCGGGCGTCGTCCAGGTGCACGCCGTGTACGAGGACGACGCGTGGACGCACATGGTC
ATGGACCTCTGCTCCGGCCCCGACCTGCTCGACTGGATCCGCCTCCGCCGCGGCGCGCCC
GTCCCGGAGCCCGTCGCCGCCGCCGTCGTCGCGCAGCTCGCGGAGGCGCTCGCGCACTGC
CACCGCCGCGGGGTCGCCCACCGCGACGTCAAGCCCGACAACATCCTCCTCGACGTCGTC
GACGACGGGATCGACGGCGGCGGCACGCCGCGCGCGCGGCTCGCGGACTTCGGGTCGGCC
GCGTGGGTCGGGGAGAGCGGCGGCAGCGCCGAGGGCCTCGTGGGGACGCCCCACTACGTG
GCGCCCGAGGTCGTCGCCGGCGGGGAGTACGGCGAGAAGGCCGACGTGTGGAGCGCCGGG
GTGGTCCTCTACGTGCTCCTCTCCGGCGGCGCCCTCCCCTTCGGCGGCGAGACCGCCGCC
GAGGTGCTCGCCTCCGTCCTCCGTGGCAGCGTCAGGTTCCCGCCTAGGCTGTTCGCCGGC
GTGTCCCCGGCGGCCAAGGACCTCATGAGGCGCATGATGTGCCGCGACACCTGGAGGCGC
TTCTCCGCCGAGCAAGTCCTCGGTCACCCGTGGATCGTGAGCGGCGGAGGAGCCCGAGCG
ATGGAGCAGCCAACCTGA

Peptide Sequence

PEP ID

Os02t0625300-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:24934934:24936452:1 gene:Os02g0625300 transcript:Os02t0625300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOENOL PYRUVATE CARBOXYLASE KINASE2 description:Similar to PEPC kinase. (Os02t0625300-00)
Sequence

MEFTPKITGKTTSMSGELKRDYEIGEEIGRGRFGVVHRCTSRATGEAFAVKSVDRSQLAD
DLDRELAELEPKLAQLAAAGNPGVVQVHAVYEDDAWTHMVMDLCSGPDLLDWIRLRRGAP
VPEPVAAAVVAQLAEALAHCHRRGVAHRDVKPDNILLDVVDDGIDGGGTPRARLADFGSA
AWVGESGGSAEGLVGTPHYVAPEVVAGGEYGEKADVWSAGVVLYVLLSGGALPFGGETAA
EVLASVLRGSVRFPPRLFAGVSPAAKDLMRRMMCRDTWRRFSAEQVLGHPWIVSGGGARA
MEQPT

Transcript Sequence

Transcript ID

Os02t0625300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:24934934:24936452:1 gene:Os02g0625300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOENOL PYRUVATE CARBOXYLASE KINASE2 description:Similar to PEPC kinase. (Os02t0625300-00)
Sequence

GAATATTCCGCTGGAGCGTCGTTAAATAGACCACCAATCGGTGGGATGGAGTTTACCCCC
AAAATCACAGGAAAAACTACTAGCATGAGTGGAGAGCTGAAGAGAGACTACGAGATTGGC
GAGGAGATCGGGCGCGGCCGCTTCGGCGTGGTCCACCGCTGCACGTCGCGCGCCACCGGC
GAGGCCTTCGCCGTCAAGTCCGTCGACCGCTCGCAGCTGGCCGACGACCTCGACCGGGAG
CTCGCGGAGCTCGAGCCCAAGCTGGCCCAGCTGGCCGCCGCGGGCAACCCGGGCGTCGTC
CAGGTGCACGCCGTGTACGAGGACGACGCGTGGACGCACATGGTCATGGACCTCTGCTCC
GGCCCCGACCTGCTCGACTGGATCCGCCTCCGCCGCGGCGCGCCCGTCCCGGAGCCCGTC
GCCGCCGCCGTCGTCGCGCAGCTCGCGGAGGCGCTCGCGCACTGCCACCGCCGCGGGGTC
GCCCACCGCGACGTCAAGCCCGACAACATCCTCCTCGACGTCGTCGACGACGGGATCGAC
GGCGGCGGCACGCCGCGCGCGCGGCTCGCGGACTTCGGGTCGGCCGCGTGGGTCGGGGAG
AGCGGCGGCAGCGCCGAGGGCCTCGTGGGGACGCCCCACTACGTGGCGCCCGAGGTCGTC
GCCGGCGGGGAGTACGGCGAGAAGGCCGACGTGTGGAGCGCCGGGGTGGTCCTCTACGTG
CTCCTCTCCGGCGGCGCCCTCCCCTTCGGCGGCGAGACCGCCGCCGAGGTGCTCGCCTCC
GTCCTCCGTGGCAGCGTCAGGTTCCCGCCTAGGCTGTTCGCCGGCGTGTCCCCGGCGGCC
AAGGACCTCATGAGGCGCATGATGTGCCGCGACACCTGGAGGCGCTTCTCCGCCGAGCAA
GTCCTCGGTCACCCGTGGATCGTGAGCGGCGGAGGAGCCCGAGCGATGGAGCAGCCAACC
TGAACGGCGGCCGCGTCCACGTCAAGAGGGGGCAGACAGAGGCAGCGAATCAGTCGGTGC
CACGTGTCGCCGTAGTCCTAGGGAGATACGGCGATATTTTACAGCCGTAGTCTATACGGT
TTTGTATATACGACGAGACGGTAGAGAGAGATCCCTGCAGCGGATCCGCTGTAGGGTGTC
GCGGTATTGCAGATCTGCAGTAGAGAGAATAATCAGAGTATTGATTGAAGAAGAAGCTCG
TGCAGTCATGCTAGGCTTCTTTTTTCTTTCACGGTTCCAGGTTTGCTCTGTCTCTAGAGA
GATCAGAGAGCCTTAATTTTCGCTTTGTTTTTTTTTGTATGATGATGAGTCAGGTTGTAT
ATACGCTAACGTAAGTACTAAGCTTTTGTACAAATCGATCGGAGTTGAATAAAAATCGGG
CTTGTGCTCTGCTTCGGCTTCC