Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0625100-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:24923862:24925468:1 gene:Os02g0625100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0625100-00)
Sequence	ATGGCGAGCGTCCGTACCGAGCGGCTCGCGTCGTGCCTCGCCGCCGTGGCCACCAAACCG GCCGACTTCCGCCGCGCGCACGCCATCCTCCTCACCTCCGGCCACCTCTCCTCCCGCTAC TCCGTCAACTGCCTCATCCGCGCCGCCTCCGCCCCCTCCGCCTCCGCCCTTCTCCTTCGT TTCCTCCTCAACCACCGCCTCCTGCCGGACCACCTGTCCCTCTCCTTTTCCCTCCACCCC TGCTCCCGCCTCCCGAGCCACCCCGTCGCCAGCGTCGTCCACTCCCTCGCCGTCAGGCTC GGCCACGCCCGCGACGTCTACGTTGTCAACGCCGCCGCCTCCGCCTACTTCGCCGCCGCC GACGTCGCCTCCGCCGAGCGGCTCTTCTCGGAGGCGTCCAGGGATGTCGCCGACGTCGTT ACGTGGACCACGATGGTCACCGGGCACGCCAACGCCGGCGACGTCGAGCGTGCGAGGTGG TTCTTCGACGCCATGCCCGAGAAGAACGTGGTGTCGTGGAACACGATGCTGGGCGCGTAC GCCCGCGCCGGGATGCTGCCGAAGGCGCGGAAGCTGTTCGACCGAATGCCCAGCCGGAAC GCTGCCACGTGGGGCTCGATGATCACCGGCCTCTTGCAGTCCGACCACTGCGAGGAGGCG TTGAGGGTGTTCAGCGACATGGTCGCGAGCGGCGTCGTGCCGAACGAGCCTGCGCTGGTG AGCACCGTCTCGGCATGCACGCAGCTGAGGTGGATGGAACACGGCACGTGGGTGCACGGG TACGCCGAGCGAGAGCTGAACGGGGCGATGAGCGCTGTCCTTGCGACGGCGATCGTAGAC ATGTATGGCAAATGTGGGAGCATCCGTGATGCCGTCAGGGTGTTCGCTGCAATGCCGGTG AGAAACATCTACTCGTGGAACTCAATGATCGCTGGGCTTGCCATGAACGGCAGCGAGAGG CAGGCCCTGTCACTCTTCTGGAAGATGCAGCTGGCTGGTGTTCGACCAAATGACATAACA TTCATTGGTTTGCTGAGCGCTTGCAGCCACTCAGGTCTTGTAGACGAGGGCCGCTGGTTG TTCTACAAGATGGTGAATCACTTTGGGATCCAGCCAGTCCCAGAGCACTATGGTCTCATG GTTGATTTGCTTGGGCGGTCCGGTCATGTCAGGGAGGCAGTGGATTTCGTCAAGAGCATG CCTGTGGAGCCACACCCAGGCTTATGGGGTGCACTTGCTGGCGCCTGCAAGATCCATGGC GAGGTGGAGCTCGGTGAGGAGGTTGCCAAGAAGCTCATTGAGTTGGAGCCTCAGCATGGC AGCCGGTACATCCTCCTGTCAAACATATATGCCACCTCGAACAGATGGGATGACATGGCT AATGTGCGCAGGATCCTGAAGGATCGCAAGGTCCCCAAGGGTACAGGCAATGCCATAGTT GGAAATGATTCTCAGTCTTCAGGATATGAAATCGATTCGTGA

Peptide Sequence

PEP ID	Os02t0625100-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:24923862:24925468:1 gene:Os02g0625100 transcript:Os02t0625100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0625100-00)
Sequence	MASVRTERLASCLAAVATKPADFRRAHAILLTSGHLSSRYSVNCLIRAASAPSASALLLR FLLNHRLLPDHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAA DVASAERLFSEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAY ARAGMLPKARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVASGVVPNEPALV STVSACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCGSIRDAVRVFAAMPV RNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWL FYKMVNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVEPHPGLWGALAGACKIHG EVELGEEVAKKLIELEPQHGSRYILLSNIYATSNRWDDMANVRRILKDRKVPKGTGNAIV GNDSQSSGYEIDS

Transcript Sequence

Transcript ID	Os02t0625100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:24923862:24925468:1 gene:Os02g0625100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0625100-00)
Sequence	TCCCCCATGGCGAGCGTCCGTACCGAGCGGCTCGCGTCGTGCCTCGCCGCCGTGGCCACC AAACCGGCCGACTTCCGCCGCGCGCACGCCATCCTCCTCACCTCCGGCCACCTCTCCTCC CGCTACTCCGTCAACTGCCTCATCCGCGCCGCCTCCGCCCCCTCCGCCTCCGCCCTTCTC CTTCGTTTCCTCCTCAACCACCGCCTCCTGCCGGACCACCTGTCCCTCTCCTTTTCCCTC CACCCCTGCTCCCGCCTCCCGAGCCACCCCGTCGCCAGCGTCGTCCACTCCCTCGCCGTC AGGCTCGGCCACGCCCGCGACGTCTACGTTGTCAACGCCGCCGCCTCCGCCTACTTCGCC GCCGCCGACGTCGCCTCCGCCGAGCGGCTCTTCTCGGAGGCGTCCAGGGATGTCGCCGAC GTCGTTACGTGGACCACGATGGTCACCGGGCACGCCAACGCCGGCGACGTCGAGCGTGCG AGGTGGTTCTTCGACGCCATGCCCGAGAAGAACGTGGTGTCGTGGAACACGATGCTGGGC GCGTACGCCCGCGCCGGGATGCTGCCGAAGGCGCGGAAGCTGTTCGACCGAATGCCCAGC CGGAACGCTGCCACGTGGGGCTCGATGATCACCGGCCTCTTGCAGTCCGACCACTGCGAG GAGGCGTTGAGGGTGTTCAGCGACATGGTCGCGAGCGGCGTCGTGCCGAACGAGCCTGCG CTGGTGAGCACCGTCTCGGCATGCACGCAGCTGAGGTGGATGGAACACGGCACGTGGGTG CACGGGTACGCCGAGCGAGAGCTGAACGGGGCGATGAGCGCTGTCCTTGCGACGGCGATC GTAGACATGTATGGCAAATGTGGGAGCATCCGTGATGCCGTCAGGGTGTTCGCTGCAATG CCGGTGAGAAACATCTACTCGTGGAACTCAATGATCGCTGGGCTTGCCATGAACGGCAGC GAGAGGCAGGCCCTGTCACTCTTCTGGAAGATGCAGCTGGCTGGTGTTCGACCAAATGAC ATAACATTCATTGGTTTGCTGAGCGCTTGCAGCCACTCAGGTCTTGTAGACGAGGGCCGC TGGTTGTTCTACAAGATGGTGAATCACTTTGGGATCCAGCCAGTCCCAGAGCACTATGGT CTCATGGTTGATTTGCTTGGGCGGTCCGGTCATGTCAGGGAGGCAGTGGATTTCGTCAAG AGCATGCCTGTGGAGCCACACCCAGGCTTATGGGGTGCACTTGCTGGCGCCTGCAAGATC CATGGCGAGGTGGAGCTCGGTGAGGAGGTTGCCAAGAAGCTCATTGAGTTGGAGCCTCAG CATGGCAGCCGGTACATCCTCCTGTCAAACATATATGCCACCTCGAACAGATGGGATGAC ATGGCTAATGTGCGCAGGATCCTGAAGGATCGCAAGGTCCCCAAGGGTACAGGCAATGCC ATAGTTGGAAATGATTCTCAGTCTTCAGGATATGAAATCGATTCGTGATTAGTGCTTCTT TGGACTGAGAAGTGCATTCAGTGTGACTTTGCACAAGCTGCGTGTGGTAGGGAGGGATGA ACCACCACCTTGGAGACACCATTGTACTGAAACAAGCCCCCCTAAGG