Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0625000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:24915862:24922083:1 gene:Os02g0625000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cryptochrome 2 description:Cryptochrome 2, blue light photoreceptor, Promotion of flowering time (Os02t0625000-01);Similar to Cryptochrome 2. (Os02t0625000-02)
Sequence	ATGGCCGGTTCGGAGAGGACCGTGGTTTGGTTCAGGAGGGACCTCAGGATCGACGACAAC CCGGCGTTGGCCTCCGCGGCGAGGGACGGCGCTGTGCTCCCTGTCTTCATATGGTGCCCT GCGGATGAAGGGCAGTTCTATCCCGGCCGGTGCTCCAGGTGGTGGCTCAAGCAGTCGCTC CCCCACCTCAGCCAGTCACTGGAGTCGCTCGGGTGCCCGCTCGTGCTGATCCGAGCCGAG AGTACCCTTGAGGCTCTTCTGCGGTGCATTGATTCTGTCGGCGCCACCAGATTGGTTTAT AATCATCTGTATGACCCTGTTTCTCTTGTGCGTGATGACAAAATAAAAAAAGAGCTTTCG GCACTGGGAATTTCCATCCAGAGTTTTAATGGTGATCTGCTGTATGAGCCATGGGAAATT TATGATGATAGTGGACTTGCATTTACAACCTTTAACATGTACTGGGAGAAGTGCATGGAA TTACCTATTGACGCATCACCGTCACTTGCACCTTGGAAATTGGTGCCTGTCCCAGGTTTG GAGAGTGTTCGTAGCTGTTCTGTTGATGACCTAGGACTTGAATCAAGCAAGGATGAGGAA TCAAGTAATGCTTTGCTAATGAGGGCCTGGTCTCCTGGTTGGCGCAATGCAGAAAAGATG CTTGAAGAATTTGTCTCCCATGGTCTCCTAGAATACTCAAAACATGGAATGAAGGTTGAG GGAGCTACTACATCATTGCTATCACCATATCTTCATTTTGGTGAGGTGAGTGTAAGAAAA GTATATCAACTTGTAAGGATGCAACAAATCAAGTGGGAAAATGAGGGAACATCTGAAGCT GAGGAGAGCATTCACTTCTTCATGCGGTCAATTGGTCTTCGAGAATATTCACGGTACTTG TGTTTTAACTTCCCATTCACACATGAAAAGTCATTGCTGGGGAACTTGAAACACTACCCT TGGAAAGTAGATGAGGAGCGGTTCAAGTCCTGGAGGCAGGGAATGACAGGATACCCATTG GTAGATGCTGGCATGAGGGAACTTTGGGCTACCGGATGGACACATAATCGGATAAGAGTT ATCATTTCAAGTTTTGCTGTGAAATTTCTACTTATCCCATGGACTTGGGGTATGAAGTAT TTTTGGGATGTGCTATTGGATGCTGATCTGGAAAGTGATATTCTTGGTTGGCAGTACATA TCTGGGAGCCTGCCTGATGGCCATGAGCTCAGTCGTCTTGATAATCCAGAGGTTCAAGGT CAAAAGTATGACCCAGATGGTGTATATGTAAGAACTTGGATACCTGAACTAGCTAGAATG CCGACAGAATGGATTCATCATCCATGGGATGCACCGAGCTGTATTCTTGAAGTTGCTGGA GTTGAGCTGGGGTTTAACTATCCTAAGCCAATCGTAGACCTTCACATTGCTAGGGAGTGT TTAGATGATTCCATCTCCACGATGTGGCAATTGGATACAGCTGAGAAACTTGCAGAATTA GATGGTGAGGTTGTGGAGGACAACTTGAGCAATATCAAGACTTTTGACATCCCAAAAGTT GTTTTGAGGGAAACATCTCCATGTGCTTTGCCCATTGATCAAAGAGTGCCCCATGCTAGC AGCAAGGATCATAATTTAAAGTCAAAGGTATTGAAGGCCTCAAATAGAAGTTCTATTTGT GTTGATATGATCAGGTCCTCAAAGATGGAAGCAACGAGCTCTGTAGCAAACTCACCGGTA TCAAGGAAAAGATCCTTTTGTGAGACTGCATTTCATGTCCCATCTTATTCATCTTCAGCT GAAGTGCATTCGCATATTCAAGATCATGGTGGTTCCTTAGTTGGGCCTTCAAGATATCTC CTGCAGGAAGCAGGTAGAAACTATGTTGATGAGGTAGAAGATAGCTCTACCGCAGATAGT GGTTCGAGCATTTCAAGACAACGAAAAGCCGCATAG

Peptide Sequence

PEP ID	Os02t0625000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:24915862:24922083:1 gene:Os02g0625000 transcript:Os02t0625000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cryptochrome 2 description:Cryptochrome 2, blue light photoreceptor, Promotion of flowering time (Os02t0625000-01);Similar to Cryptochrome 2. (Os02t0625000-02)
Sequence	MAGSERTVVWFRRDLRIDDNPALASAARDGAVLPVFIWCPADEGQFYPGRCSRWWLKQSL PHLSQSLESLGCPLVLIRAESTLEALLRCIDSVGATRLVYNHLYDPVSLVRDDKIKKELS ALGISIQSFNGDLLYEPWEIYDDSGLAFTTFNMYWEKCMELPIDASPSLAPWKLVPVPGL ESVRSCSVDDLGLESSKDEESSNALLMRAWSPGWRNAEKMLEEFVSHGLLEYSKHGMKVE GATTSLLSPYLHFGEVSVRKVYQLVRMQQIKWENEGTSEAEESIHFFMRSIGLREYSRYL CFNFPFTHEKSLLGNLKHYPWKVDEERFKSWRQGMTGYPLVDAGMRELWATGWTHNRIRV IISSFAVKFLLIPWTWGMKYFWDVLLDADLESDILGWQYISGSLPDGHELSRLDNPEVQG QKYDPDGVYVRTWIPELARMPTEWIHHPWDAPSCILEVAGVELGFNYPKPIVDLHIAREC LDDSISTMWQLDTAEKLAELDGEVVEDNLSNIKTFDIPKVVLRETSPCALPIDQRVPHAS SKDHNLKSKVLKASNRSSICVDMIRSSKMEATSSVANSPVSRKRSFCETAFHVPSYSSSA EVHSHIQDHGGSLVGPSRYLLQEAGRNYVDEVEDSSTADSGSSISRQRKAA

Transcript Sequence

Transcript ID	Os02t0625000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:24915862:24922083:1 gene:Os02g0625000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cryptochrome 2 description:Cryptochrome 2, blue light photoreceptor, Promotion of flowering time (Os02t0625000-01);Similar to Cryptochrome 2. (Os02t0625000-02)
Sequence	GGGGGGGGGGTGCGTATGCGTGCGTGTGCGCTGCTTCTTCTCTCAAGTGGTGGAGGGGAA GAGGAGCACAAGGAGAGGCAGACGGCGATAAGTCGCTCGCTCGCCAATTCGCCATGATCG GGTGGGGCTCCGCTACCGTACACGCCCCGGAGGAAGCCCAGGCCCCGCCCATGCTGCTGA GCTCGTGATCCTGCGCTCCTGGCCACAGGCTGCGATTCGGCGTTGGGGTTTCTGGTCCGA GGCGGCCATCAAGATCCGTGCTTCTTGTCCTTTGGCCCGGGCGGAGTGGTTTCTTTCTTG CACGGGACGTGCTCGACGGAATGCCTGTGAGGGGAATTCGCTCGCTGTGAGTTGGGAGGG GTGGTAGCTGTGCTTGCCTGCTTGGTCTGGTCATGGTGGATTGAGTGCTTGGGGGTGGTG GGATTTGGTCCCTGGGCATGGCCGGTTCGGAGAGGACCGTGGTTTGGTTCAGGAGGGACC TCAGGATCGACGACAACCCGGCGTTGGCCTCCGCGGCGAGGGACGGCGCTGTGCTCCCTG TCTTCATATGGTGCCCTGCGGATGAAGGGCAGTTCTATCCCGGCCGGTGCTCCAGGTGGT GGCTCAAGCAGTCGCTCCCCCACCTCAGCCAGTCACTGGAGTCGCTCGGGTGCCCGCTCG TGCTGATCCGAGCCGAGAGTACCCTTGAGGCTCTTCTGCGGTGCATTGATTCTGTCGGCG CCACCAGATTGGTTTATAATCATCTGTATGACCCTGTTTCTCTTGTGCGTGATGACAAAA TAAAAAAAGAGCTTTCGGCACTGGGAATTTCCATCCAGAGTTTTAATGGTGATCTGCTGT ATGAGCCATGGGAAATTTATGATGATAGTGGACTTGCATTTACAACCTTTAACATGTACT GGGAGAAGTGCATGGAATTACCTATTGACGCATCACCGTCACTTGCACCTTGGAAATTGG TGCCTGTCCCAGGTTTGGAGAGTGTTCGTAGCTGTTCTGTTGATGACCTAGGACTTGAAT CAAGCAAGGATGAGGAATCAAGTAATGCTTTGCTAATGAGGGCCTGGTCTCCTGGTTGGC GCAATGCAGAAAAGATGCTTGAAGAATTTGTCTCCCATGGTCTCCTAGAATACTCAAAAC ATGGAATGAAGGTTGAGGGAGCTACTACATCATTGCTATCACCATATCTTCATTTTGGTG AGGTGAGTGTAAGAAAAGTATATCAACTTGTAAGGATGCAACAAATCAAGTGGGAAAATG AGGGAACATCTGAAGCTGAGGAGAGCATTCACTTCTTCATGCGGTCAATTGGTCTTCGAG AATATTCACGGTACTTGTGTTTTAACTTCCCATTCACACATGAAAAGTCATTGCTGGGGA ACTTGAAACACTACCCTTGGAAAGTAGATGAGGAGCGGTTCAAGTCCTGGAGGCAGGGAA TGACAGGATACCCATTGGTAGATGCTGGCATGAGGGAACTTTGGGCTACCGGATGGACAC ATAATCGGATAAGAGTTATCATTTCAAGTTTTGCTGTGAAATTTCTACTTATCCCATGGA CTTGGGGTATGAAGTATTTTTGGGATGTGCTATTGGATGCTGATCTGGAAAGTGATATTC TTGGTTGGCAGTACATATCTGGGAGCCTGCCTGATGGCCATGAGCTCAGTCGTCTTGATA ATCCAGAGGTTCAAGGTCAAAAGTATGACCCAGATGGTGTATATGTAAGAACTTGGATAC CTGAACTAGCTAGAATGCCGACAGAATGGATTCATCATCCATGGGATGCACCGAGCTGTA TTCTTGAAGTTGCTGGAGTTGAGCTGGGGTTTAACTATCCTAAGCCAATCGTAGACCTTC ACATTGCTAGGGAGTGTTTAGATGATTCCATCTCCACGATGTGGCAATTGGATACAGCTG AGAAACTTGCAGAATTAGATGGTGAGGTTGTGGAGGACAACTTGAGCAATATCAAGACTT TTGACATCCCAAAAGTTGTTTTGAGGGAAACATCTCCATGTGCTTTGCCCATTGATCAAA GAGTGCCCCATGCTAGCAGCAAGGATCATAATTTAAAGTCAAAGGTATTGAAGGCCTCAA ATAGAAGTTCTATTTGTGTTGATATGATCAGGTCCTCAAAGATGGAAGCAACGAGCTCTG TAGCAAACTCACCGGTATCAAGGAAAAGATCCTTTTGTGAGACTGCATTTCATGTCCCAT CTTATTCATCTTCAGCTGAAGTGCATTCGCATATTCAAGATCATGGTGGTTCCTTAGTTG GGCCTTCAAGATATCTCCTGCAGGAAGCAGGTAGAAACTATGTTGATGAGGTAGAAGATA GCTCTACCGCAGATAGTGGTTCGAGCATTTCAAGACAACGAAAAGCCGCATAGTTGCTCT GCTTGACAAGGAAGGGTGAAGGTGTACTCAACTAAGGGTGTGTAGGAGTAAAACTTGTGT GATCATAAGGAAATTTTGTACATTCTGTAATCTGTTTATTTTTGCTTTTTGTGACACATT CTGTAACTAGCTGAGAACTGAGCTGACACGGTTTCCTCGCCCAAAAGAAAAAAAAAATGC AACATCTTTCCTTCGTTGCAATAAGAGAAACTTCTCATCC