Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0622500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:24783201:24786542:-1 gene:Os02g0622500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0622500-01)
Sequence

ATGTCGACGCAGTCCATCTCGCCCGCCGCGGCGGCCGCGTCCGCGCAGTACTCGTACCCG
GCTGCCGCGGCGGCGGCGGTCCCGTCCTACTTCCCCGTCCCGTTCCACCTCCAGAACGTG
CAGCAGCCCGCCACCTGGCCAGCGGCGCCCGCGGCGTACAACGCCGTCTACCCCATGCCC
CAAGTCCAGCAGGTTCAGCAACTGTTCCAGAAAGATTCACAGATAATCACTCCTGAAGCT
CTAGCTACTGTGAAAGCTGCTATTGCAAATAGTGAGAAAGACAAGAAGATTGAAGCAAAC
AAAAAGGCAGTACCTCGAAAGGCAGCTGGGCAATCTTGGGAGGATCCAACTTTGGCTGAC
TGGCCCGAAATGTGA

Peptide Sequence

PEP ID

Os02t0622500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:24783201:24786542:-1 gene:Os02g0622500 transcript:Os02t0622500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0622500-01)
Sequence

MSTQSISPAAAAASAQYSYPAAAAAAVPSYFPVPFHLQNVQQPATWPAAPAAYNAVYPMP
QVQQVQQLFQKDSQIITPEALATVKAAIANSEKDKKIEANKKAVPRKAAGQSWEDPTLAD
WPEM

Transcript Sequence

Transcript ID

Os02t0622500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:24783201:24786542:-1 gene:Os02g0622500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0622500-01)
Sequence

GTGATCGCCAGTAACGCCCAGGAGCTTCGAGAGAATTCCACACCATTCCCCCCTACCACC
ACGCGGCGCATCATCACAATACACAGCCTCTGCTTCCCCCGGCAACCCAACCGATTCGCG
CTCACGCCACCTGCAATCCGCGACCAGACGCGCGGGCCGTTGAGATCAACAAACACATCG
CACGCGACGCCGCGTGAGCCCGTACGATCGCCCCCTCCCGCGCCGCGCCTCCGCACTCTG
GTTGGTTGCCTCGCCGGCGATGTCGACGCAGTCCATCTCGCCCGCCGCGGCGGCCGCGTC
CGCGCAGTACTCGTACCCGGCTGCCGCGGCGGCGGCGGTCCCGTCCTACTTCCCCGTCCC
GTTCCACCTCCAGAACGTGCAGCAGCCCGCCACCTGGCCAGCGGCGCCCGCGGCGTACAA
CGCCGTCTACCCCATGCCCCAAGTCCAGCAGGTTCAGCAACTGTTCCAGAAAGATTCACA
GATAATCACTCCTGAAGCTCTAGCTACTGTGAAAGCTGCTATTGCAAATAGTGAGAAAGA
CAAGAAGATTGAAGCAAACAAAAAGGCAGTACCTCGAAAGGCAGCTGGGCAATCTTGGGA
GGATCCAACTTTGGCTGACTGGCCCGAAATGTGACTTTCCCCTCGTCTGAACTTGTCTGA
ATGTCTGTTATCCTCACGTCAACAAACCATCAAACACCTTCAATTCCCCAGGCAAGATCT
AATGTTCGATCTATGTATTCTAATAAGACAAACTTTCCCCTGTTTCCTTCTGTTAAAGGT
GGCCGAGGATGTGATATGTAGCCCAACAGGTTTCAGAGTTGATGCCTGTCTCGTGGAATT
AGGTGGGCTTTGCAGATGATATAGTAAACATTTCCTGTGCCTTTGCCATTAGTTTACATG
CATTGTCATCTCGTTTTTGCATGCCTAATTTGATTATATGAATATGATATTTGAAAATTT
TTCATAGAGTTATACAGAGAAATATGTTCTACTGCGCATTTTGGTGCAAACTATTCCACT
TATATTTTTTATTCTAATGTTCCTGGTGTAATTTTGATGATACACTTACCATCCTAGGAT
TAATATGGTGATAGATTCTTGTTGGGGACTGTCCAAATAAAGATCTTCCCTTATATATAT
TGTTATCAACAAAGCATGAACATTATTAAAAAGTTTTGTTCCATATATTAGTGATTGCAT
AAAGGATGAGGCTTTTAGCCAATCAACTTACTTTCCACAATAATCTGATTTTATCAATTC
GTCATGTTGCGTTCCTGTTAGTCAATATAACATGTACTGTAGCTCAGCTCTTGCAGATTG
TTTGTCATCCTTATTTTTAGATTTTTGTACAATTAAATATATTAACTGTATTTAGCATTT
TTAGCTACAGTTTTCTAGTTTTACATGCTTAGCTGACGTATCAGATACCACTATTTAGTT
GTAATACTTCATGATGTGTCATCCATCATGTAACATGTCTAAGATGTAGCAGCCTTGCTG
AGTTGATGTATAATAATTTAGCAGCAGCATGCAATGTTGGCAGCGTTAAATACTTATGAT
GCTATATTGTCTTTGGAATTTACTAGCACCTGACATGAGTATGTATTTGTGCTGTCATGT
TTCGTCATAATTTGATAGAAGCAAATATATTATTCTACTTTAGTCTGTAGCAATGACCAA
AAATGGTGCTATAACAGTTGTTTTTCTCAAATGTGCCCTCTTTTTATTTCAAAGCATTCA
CACTTACATCTGACAAATTTTCCCCATCCACAGATGATTTTCGGTTGTTTTGTGGCGATC
TTGGAAACGAAGTGAACGATGATGTTCTTACAAAGGCATTTTCAAAATATCCATCCTTCA
ACATGGCTAGGGTTATTAGGGACAAATGGACTGGTAAAACTAGGGGCTATGCCTTTGTTA
GTTTTGCTAATGCGTCGGATCTTGCTGCAGCATTGAAAGAGATGAATGGTAAATATGTTG
GAAACAGGCCAATCAAACTACGCAAGAGCACATGGAAGAACAGAATCGACTACGAGGCAT
TACAGAAGCCGAAGACTCAACCACAGAAGAAGTTCAAAGCGCAGAAAAAAAGCATTCTAC
ACAAGTGAAGTAAATTCACTCTCTAGAGAGTGATCCCTAGTGTCATGTTGCACATGAGTC
CTTTGTTGCTCCTGCAATAAACGACGTTAAAGCCTTCAGCGCCCGGCGGTGCGCTTGTCA
CGTTTGGCCTAGTGATTGTTCTAGGGTAGTATGGCTCGTCCCAATTTGTAATGGAAATTT
AGGTGTAAATATTCTAATGACTGGTACCGTTGTGAACGGTACGAAGTTCTCTTATGATGA
ACTCCTGTAGCGTGGAGCAATTCGATTATAAATATTTTCTTC