Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0622100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:24766809:24772750:1 gene:Os02g0622100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID BREAKDOWN 2 description:Casein kinase I, Low temperature tolerance, Root development, Hormone sensitivity (Os02t0622100-01)
Sequence	ATGGAGCATGTGATCGGGGGGAAGTTTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTT GGGGAGCTATACCTTGGTGTGAATATACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAA TCTGTAAAATCAAGGCATCCTCAGCTTCATTATGAGTCAAAACTATACATGCTTCTGCAG GGGGGAACTGGAATTCCTCATCTGAAGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATG GTTATCGATCTTCTTGGTCCAAGTTTAGAGGACTTATTCAACTACTGCAACAGAAAGTTT TCTCTTAAAACAGTACTTATGCTTGCTGATCAGATGATCAACAGGGTAGAGTACATGCAC ACTAGGGGGTTTCTACATCGTGATATCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGC AAAGCAAGCCAGGTTTATGTCATCGACTATGGTCTTGCAAAGAAATACCGGGACCTCCAA ACTCATAAGCATATACCTTACAGGGAGAACAAAAATCTCACAGGAACAGCACGCTATGCT AGTGTAAACACCCATCTTGGAGTAGAACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGC TATGTGCTTATGTATTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACA AAAAAACAGAAATATGACAAAATTAGTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTC TGTAAATCTTATCCCACAGAGTTCATTTCATACTTCCATTACTGTCGATCTTTGCGATTT GAAGATAAACCAGACTACAGCTATTTGAAGAGACTTTTCCGAGATCTATTCATCCGTGAA GGGTACCAGCTTGATTATATATTTGATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTG CGATCAAGTGGAAGGACAAGTGGGTTGGTGGGACCATCTGCAGAACGGACTGAACGAGCT GCAGCAAGACAGGATGTTCCTGACAGATTCTCTGGTACAGTCGATCCATTTGCTAGAAGA ACTGGCTCTGGTTCTGGCCATTACGGAGAGCACACAAAGCACAGAAATATATTGGATTCA TTACTTGCACCCAAGACGGCTGTTGATTTAGATAAAAGAAGGCCCACATCATCATCTCGT AATGGGAGCACATCAAGGAAGGCTCTCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCC ATTGATCCGAACCGCAGTAACCTAATTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACT ATGCAGAGGCTTCACCAGTCAACAGGACTTGAGACCAGGTCCTCGCTTACCAAAACTGCA AGAAATGTCCATGATGATCCCACTTTGAGGACCTTTGAACGCCTTTCAATCAGTGCTGAC AGAAGGAAATAA

Peptide Sequence

PEP ID	Os02t0622100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:24766809:24772750:1 gene:Os02g0622100 transcript:Os02t0622100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID BREAKDOWN 2 description:Casein kinase I, Low temperature tolerance, Root development, Hormone sensitivity (Os02t0622100-01)
Sequence	MEHVIGGKFKLGRKIGSGSFGELYLGVNIQSSEEVAIKLESVKSRHPQLHYESKLYMLLQ GGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQMINRVEYMH TRGFLHRDIKPDNFLMGLGRKASQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYA SVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPVEVL CKSYPTEFISYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQLDYIFDWTKQGSESNRL RSSGRTSGLVGPSAERTERAAARQDVPDRFSGTVDPFARRTGSGSGHYGEHTKHRNILDS LLAPKTAVDLDKRRPTSSSRNGSTSRKALLSSSRPSSGDPIDPNRSNLIPTSSGSSRPST MQRLHQSTGLETRSSLTKTARNVHDDPTLRTFERLSISADRRK

Transcript Sequence

Transcript ID	Os02t0622100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:24766809:24772750:1 gene:Os02g0622100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID BREAKDOWN 2 description:Casein kinase I, Low temperature tolerance, Root development, Hormone sensitivity (Os02t0622100-01)
Sequence	GGGGTACCCATAATCTCCACATCCTCCTCCTCCCACCTCTACTCCGGCCACCGGCCGCCT CCTCCCACGCTCCCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCATCGCCACCCGCCTCC TCCTTCTAGCAGTAGTAATAAAGGAAGGAAGAAAATCCACCGCCCTACCCCTATCTATCC GTTGCCTCACGTCCGTTTCCCACATTTTCCGCTTCCTTCGTCCATCGCCATCTATTAACC CGCCCCCCCACGATTCCTGCCGAGAAATTTCTCCCCCCCACAGAGAGGGAGGCGATCCCT AGCCTCGTCCTGAATCTCGCGGCGCCGCCAATTCGATCTGCCCGCGCCGTCTCAGGGCGG CGAATCTTGGGCTGGAGTCGGGGGGAGAGATCCGGGATCTTCCTTTTCTTGGGTGTTCCC GGGACGCAAATCTTGCGGCCGCCGGGCAATGTGACTGGGGTTCTTGTGGGGGGTGAGGCG ATTCGCGCGCGCATTCGGTGCTGAATCTTGCGGGGATGGAGCATGTGATCGGGGGGAAGT TTAAGCTGGGGAGGAAGATTGGGAGCGGATCTTTTGGGGAGCTATACCTTGGTGTGAATA TACAGAGCAGCGAGGAGGTAGCCATCAAGTTGGAATCTGTAAAATCAAGGCATCCTCAGC TTCATTATGAGTCAAAACTATACATGCTTCTGCAGGGGGGAACTGGAATTCCTCATCTGA AGTGGTTTGGAGTGGAGGGGGAGTACAATGTCATGGTTATCGATCTTCTTGGTCCAAGTT TAGAGGACTTATTCAACTACTGCAACAGAAAGTTTTCTCTTAAAACAGTACTTATGCTTG CTGATCAGATGATCAACAGGGTAGAGTACATGCACACTAGGGGGTTTCTACATCGTGATA TCAAGCCAGACAACTTCCTTATGGGTTTAGGCCGCAAAGCAAGCCAGGTTTATGTCATCG ACTATGGTCTTGCAAAGAAATACCGGGACCTCCAAACTCATAAGCATATACCTTACAGGG AGAACAAAAATCTCACAGGAACAGCACGCTATGCTAGTGTAAACACCCATCTTGGAGTAG AACAAAGCAGGAGAGATGATTTAGAGTCTCTGGGCTATGTGCTTATGTATTTCTTAAGAG GAAGCCTTCCTTGGCAAGGTCTAAAAGCTGGCACAAAAAAACAGAAATATGACAAAATTA GTGAAAAGAAAATGCTTACTCCAGTTGAGGTTCTCTGTAAATCTTATCCCACAGAGTTCA TTTCATACTTCCATTACTGTCGATCTTTGCGATTTGAAGATAAACCAGACTACAGCTATT TGAAGAGACTTTTCCGAGATCTATTCATCCGTGAAGGGTACCAGCTTGATTATATATTTG ATTGGACGAAGCAAGGTTCAGAAAGTAACAGATTGCGATCAAGTGGAAGGACAAGTGGGT TGGTGGGACCATCTGCAGAACGGACTGAACGAGCTGCAGCAAGACAGGATGTTCCTGACA GATTCTCTGGTACAGTCGATCCATTTGCTAGAAGAACTGGCTCTGGTTCTGGCCATTACG GAGAGCACACAAAGCACAGAAATATATTGGATTCATTACTTGCACCCAAGACGGCTGTTG ATTTAGATAAAAGAAGGCCCACATCATCATCTCGTAATGGGAGCACATCAAGGAAGGCTC TCTTGTCAAGCAGCAGACCAAGTTCTGGAGATCCCATTGATCCGAACCGCAGTAACCTAA TTCCAACCAGCAGTGGCAGCAGTCGCCCATCAACTATGCAGAGGCTTCACCAGTCAACAG GACTTGAGACCAGGTCCTCGCTTACCAAAACTGCAAGAAATGTCCATGATGATCCCACTT TGAGGACCTTTGAACGCCTTTCAATCAGTGCTGACAGAAGGAAATAATGCTTCGAAGAGC AAAAGATGTGAGTTGCTGCTCCAGTGAGGACACTGGGGATTCCTTCACACGATGATTACT GATCAACAAGTAAAAACCATTCTGTGCTACAGATGATGCTGAGATATGCTTAAGAGTGAA GTTTGCTTACTGAATCTTGGCGCAAAAGAAATGGTTAAAGAAATCATTTTACACGCCATT CAGAAGAACCCGGACCAGCAACTGTGCTGGTCCAATTAATGCTGATGTTGATCAAATATT TGTAGAAATGTTATTGAAATAAAGCAGTTCATTACTAGCAAAATATGTACTATCACGTAG TATTTCCTTTGTGCACTGCAACTAGAACTTCTGCCACTCTGCCACTATACTCTTAAGATA ATCAATATCCTTTTTTGCCTTAGTGCCCTTTAGATACTCCGTCACATTATTTCCTTAAAA ACTTGGAGATCATGTAATCGTTATTAATATATCATACGATCAGATATCGTTATTCAACTA GC