Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0621800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:24749451:24754760:-1 gene:Os02g0621800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID WEAKNESS H1 description:Glucose-methanol-choline (GMC) oxidoreductase family protein, Hybrid breakdown (HB) (Os02t0621800-01)
Sequence	ATGGGAGAGGAGAAGAGCCAGCAGCGGCGGCGGCAGGGCCACCCTCTCCTGAGGGGAGGC GGCGCGGGGAAGCAGGCCGGGCGGCGTTACACCCACGGCTTCTCCGCCTCCCAGATGGTC GCGCTCGCCGCCCTGTGCGGCGCGCTGGCGCCCTCGCTCCCGCCGGACACCCGCGACGAC GACGACGACGACGCCGGAGGCGGACGCTATGGCGGCGCCGGTGCGTCCGACGCCAAGGCC GTCAGGGACTTCCTCCTCGCCTCCGCCGCCGACCCGCCCGTCCCCGACGAGGTGGCGGAG CTGATGACGAGGATGTGCCTCCGGGAGGCGCTGGCGCTGGTGCGGGCGGTGCTGTGGCTG CTGGGGACGCGGCTGGGGACGCTGGCGCTGTGCGGGGGGCGGTGCGTGTCGTGGGGGAGG TGGCCGTTCGTGCTCACGTTCGCGGAGATGCCGGTGGAGCGGCGGGAGGAGGCGCTCGGG CGGTGGAGCAGGGTGACCGTGCTCCCGCCGCTGCGCGCCTTCTTCCTCGTCGTCAAGGTC TTCTGCCTCTACGTCTTCTACTCCTGGATTGACGAGAGCTCAGAGAACCCGCACTGGCGA GCGATCGGGTACAGCCCGCCGACCGACGAACCGCCGGCGGAGGAGCACACCGAGGCGACG AAGCGGCCACTCGACGACGGCGTGGTCGAGACCATCAACCTCACGGACGCGTCCCTCCCG TCGTCCCTCGCGGAGAAAGGCCTCGCGGTGACCGATGACGCGGCGCGCAACGTGTGCCGG GTGGAGTGCGACGTCGCCATCGTCGGCTCCGGCTGCGGCGGGGGCGTGGCGGCCGCGGTG CTCGCCGGGGCCGGCCACAAGGTGGTGGTCATCGAGAAGGGCAACTACTTCACGTCGCGG GACTACACGTCCTTCGAGGGCCCGTCGATCAACCAGCTCTACGAGTCCGGTGGGTTCGTC ACCACGATGAACGGCGGCGGGCTGCTCCTGGCCGGCTCCACGGTCGGCGGCGGCTCGGCG GTGAACTGGTCGGCCTGCCTCAAGACGCCCGAGTTCGTGCGCAGGGAGTGGGCGGCCGCG CACGGGCTCCCGCTGTTCGCCACCCCCGACTACGCCGCCGCCATGGACAAGGTGTTCGAG CGGCTCGGCGTGACGTCGGGGTGTACGGAGGAAGGGCTCCAGAACAAGGTCCTCCGCAAG GGGTGCGAGAAGCTGGGCTACAAGGTCGACGCGGTGGCGAGGAACTCGTCGGAGGGACAC TACTGCGGCAGCTGCGGTTTCGGCTGCCGCACCGGGGACAAGCGCGGCACGGACACGACG TGGCTGGTCGACGCGGTGGGCCGCGGCGCGGTGATCCTGACGGGGTGCAAGGCGGAGAAG CTGGTGCTGGAACGCGGCGGGGCGAGGGGCAGGCGGTGCGTCGGCGTGGTGGCCAGGAGC ACCAACCCGGCGATCACGAAGACGCTGGAGGTGCGCGCCAAGGTGACCGTGTCGGCGGCC GGCTCGCTCCTCACGCCCGTGCTGCTGCAGCGGAGCGGGCTCACCAACCCGCACATCGGC AAGAACCTCCACCTCCACCCGACCGCCCTGGCGTGGGGCTACTTCCCGGACACGATGCCG GACCTGAAGGGGAAGGCGTACGAGGGCGGCATCATCACGTCGATGCACAAGGTGGAGACC TCCGGCGCCGGCGCGCCGCACCGTGCCATCCTCGAGACGCCGATGATGGCCGTGGCCGCC ACGGGGACGCAGATGCCCTGGCTGTCCGGGCGAGACTCGAAGGAGCGGATGCTCCGGTTC GCCCGGACGGTGCACATCTTCTCCCTGGTCAGGGACCGCGGGTCGGGGACGGTGCACGGC GAGCGGCGTGTCGCGTACCGCCTCGACGCGGCGGACAGGGAGGACATCCGCGACGGCTTG CGGCGCGCGCTGCGGGTCCTCGTCGCGGCGGGCGCGGCGGAGGTGGGCACGCACCGGAGC GACGGGCAGCGGCTGCGGTGCGAGGGGCTGACCGAGGAGGCGCTGGAGGAGTTCCTCGAC GGCGTCACCGTGGTGCGCGGGCCGCAGTCGAGGAGCGAGACGTGGGGCCTCTTCTGCTCG GCGCACCACATGGGCAGCTGCCGGATGGGCGCCACGGCGGGCGACGGCGCCGTCGACGCC CGCGGCGAGAGCTGGGAGGCGGAGCGGCTGTACGTGTGCGACGGCAGCGTGCTGCCCACC GCGGTGGGCGTCAACCCCATGATCACCATACAGTCCGTAGCGTATTGCCTTGCAAATGGC ATCGCCGACTCCCTGTCCGCTAAAACGACTTAA

Peptide Sequence

PEP ID	Os02t0621800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:24749451:24754760:-1 gene:Os02g0621800 transcript:Os02t0621800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID WEAKNESS H1 description:Glucose-methanol-choline (GMC) oxidoreductase family protein, Hybrid breakdown (HB) (Os02t0621800-01)
Sequence	MGEEKSQQRRRQGHPLLRGGGAGKQAGRRYTHGFSASQMVALAALCGALAPSLPPDTRDD DDDDAGGGRYGGAGASDAKAVRDFLLASAADPPVPDEVAELMTRMCLREALALVRAVLWL LGTRLGTLALCGGRCVSWGRWPFVLTFAEMPVERREEALGRWSRVTVLPPLRAFFLVVKV FCLYVFYSWIDESSENPHWRAIGYSPPTDEPPAEEHTEATKRPLDDGVVETINLTDASLP SSLAEKGLAVTDDAARNVCRVECDVAIVGSGCGGGVAAAVLAGAGHKVVVIEKGNYFTSR DYTSFEGPSINQLYESGGFVTTMNGGGLLLAGSTVGGGSAVNWSACLKTPEFVRREWAAA HGLPLFATPDYAAAMDKVFERLGVTSGCTEEGLQNKVLRKGCEKLGYKVDAVARNSSEGH YCGSCGFGCRTGDKRGTDTTWLVDAVGRGAVILTGCKAEKLVLERGGARGRRCVGVVARS TNPAITKTLEVRAKVTVSAAGSLLTPVLLQRSGLTNPHIGKNLHLHPTALAWGYFPDTMP DLKGKAYEGGIITSMHKVETSGAGAPHRAILETPMMAVAATGTQMPWLSGRDSKERMLRF ARTVHIFSLVRDRGSGTVHGERRVAYRLDAADREDIRDGLRRALRVLVAAGAAEVGTHRS DGQRLRCEGLTEEALEEFLDGVTVVRGPQSRSETWGLFCSAHHMGSCRMGATAGDGAVDA RGESWEAERLYVCDGSVLPTAVGVNPMITIQSVAYCLANGIADSLSAKTT

Transcript Sequence

Transcript ID	Os02t0621800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:24749451:24754760:-1 gene:Os02g0621800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID WEAKNESS H1 description:Glucose-methanol-choline (GMC) oxidoreductase family protein, Hybrid breakdown (HB) (Os02t0621800-01)
Sequence	GAAGGTAGAATCAGCTTTCGTTGACCCGCTCGGCGTTAGCACTCGAGAGTCCCCGTCCAT CCTATTAATCCTCGGGCGTAGCACCACCTCACCTAGTCTCCAAGCTCCATCGAAGACGAC GACTCACTGCTAGCTGGTAGCTGCTGCCGGTGGTGCCGATCGACTGCCGGACGGCGGGCA GAGACGCCATGGGAGAGGAGAAGAGCCAGCAGCGGCGGCGGCAGGGCCACCCTCTCCTGA GGGGAGGCGGCGCGGGGAAGCAGGCCGGGCGGCGTTACACCCACGGCTTCTCCGCCTCCC AGATGGTCGCGCTCGCCGCCCTGTGCGGCGCGCTGGCGCCCTCGCTCCCGCCGGACACCC GCGACGACGACGACGACGACGCCGGAGGCGGACGCTATGGCGGCGCCGGTGCGTCCGACG CCAAGGCCGTCAGGGACTTCCTCCTCGCCTCCGCCGCCGACCCGCCCGTCCCCGACGAGG TGGCGGAGCTGATGACGAGGATGTGCCTCCGGGAGGCGCTGGCGCTGGTGCGGGCGGTGC TGTGGCTGCTGGGGACGCGGCTGGGGACGCTGGCGCTGTGCGGGGGGCGGTGCGTGTCGT GGGGGAGGTGGCCGTTCGTGCTCACGTTCGCGGAGATGCCGGTGGAGCGGCGGGAGGAGG CGCTCGGGCGGTGGAGCAGGGTGACCGTGCTCCCGCCGCTGCGCGCCTTCTTCCTCGTCG TCAAGGTCTTCTGCCTCTACGTCTTCTACTCCTGGATTGACGAGAGCTCAGAGAACCCGC ACTGGCGAGCGATCGGGTACAGCCCGCCGACCGACGAACCGCCGGCGGAGGAGCACACCG AGGCGACGAAGCGGCCACTCGACGACGGCGTGGTCGAGACCATCAACCTCACGGACGCGT CCCTCCCGTCGTCCCTCGCGGAGAAAGGCCTCGCGGTGACCGATGACGCGGCGCGCAACG TGTGCCGGGTGGAGTGCGACGTCGCCATCGTCGGCTCCGGCTGCGGCGGGGGCGTGGCGG CCGCGGTGCTCGCCGGGGCCGGCCACAAGGTGGTGGTCATCGAGAAGGGCAACTACTTCA CGTCGCGGGACTACACGTCCTTCGAGGGCCCGTCGATCAACCAGCTCTACGAGTCCGGTG GGTTCGTCACCACGATGAACGGCGGCGGGCTGCTCCTGGCCGGCTCCACGGTCGGCGGCG GCTCGGCGGTGAACTGGTCGGCCTGCCTCAAGACGCCCGAGTTCGTGCGCAGGGAGTGGG CGGCCGCGCACGGGCTCCCGCTGTTCGCCACCCCCGACTACGCCGCCGCCATGGACAAGG TGTTCGAGCGGCTCGGCGTGACGTCGGGGTGTACGGAGGAAGGGCTCCAGAACAAGGTCC TCCGCAAGGGGTGCGAGAAGCTGGGCTACAAGGTCGACGCGGTGGCGAGGAACTCGTCGG AGGGACACTACTGCGGCAGCTGCGGTTTCGGCTGCCGCACCGGGGACAAGCGCGGCACGG ACACGACGTGGCTGGTCGACGCGGTGGGCCGCGGCGCGGTGATCCTGACGGGGTGCAAGG CGGAGAAGCTGGTGCTGGAACGCGGCGGGGCGAGGGGCAGGCGGTGCGTCGGCGTGGTGG CCAGGAGCACCAACCCGGCGATCACGAAGACGCTGGAGGTGCGCGCCAAGGTGACCGTGT CGGCGGCCGGCTCGCTCCTCACGCCCGTGCTGCTGCAGCGGAGCGGGCTCACCAACCCGC ACATCGGCAAGAACCTCCACCTCCACCCGACCGCCCTGGCGTGGGGCTACTTCCCGGACA CGATGCCGGACCTGAAGGGGAAGGCGTACGAGGGCGGCATCATCACGTCGATGCACAAGG TGGAGACCTCCGGCGCCGGCGCGCCGCACCGTGCCATCCTCGAGACGCCGATGATGGCCG TGGCCGCCACGGGGACGCAGATGCCCTGGCTGTCCGGGCGAGACTCGAAGGAGCGGATGC TCCGGTTCGCCCGGACGGTGCACATCTTCTCCCTGGTCAGGGACCGCGGGTCGGGGACGG TGCACGGCGAGCGGCGTGTCGCGTACCGCCTCGACGCGGCGGACAGGGAGGACATCCGCG ACGGCTTGCGGCGCGCGCTGCGGGTCCTCGTCGCGGCGGGCGCGGCGGAGGTGGGCACGC ACCGGAGCGACGGGCAGCGGCTGCGGTGCGAGGGGCTGACCGAGGAGGCGCTGGAGGAGT TCCTCGACGGCGTCACCGTGGTGCGCGGGCCGCAGTCGAGGAGCGAGACGTGGGGCCTCT TCTGCTCGGCGCACCACATGGGCAGCTGCCGGATGGGCGCCACGGCGGGCGACGGCGCCG TCGACGCCCGCGGCGAGAGCTGGGAGGCGGAGCGGCTGTACGTGTGCGACGGCAGCGTGC TGCCCACCGCGGTGGGCGTCAACCCCATGATCACCATACAGTCCGTAGCGTATTGCCTTG CAAATGGCATCGCCGACTCCCTGTCCGCTAAAACGACTTAATTAGCTCCTATCGTATCTT CTACTACAAAATTCATCCATTCCAGTCCATTCCAGAACATCACAGCTTGCAAATTCGATT AGTACGTTTTAGCGTATATGATTGTTACGAGGACCAGAATAATGTGCATGATTCTTGTCG TGTGAAGTTATGGATTATCTGTAATTATCTCTATAAAAAGGAAAAAATAAACACCGCAAT GAAAATGCTTCCTGCATACTTTATTC