Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0621100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:24708074:24717284:1 gene:Os02g0621100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 10 description:Similar to Su(VAR)3-9-related protein 4. (Os02t0621100-01)
Sequence	ATGGCCAAACCCAATGGCAAAGAGAAAACGGGTGACACGGGATTGTCGATGGCTCCTCCA AAGATTTCCAAGGATAGATTTGATGCTGCTATCAGAGCCATGGCTGATATTGGTATCCTA AAGGAAACTGCTGCGCCCGTGTTGAATAATCTACTAAACTTATTCGATTACAACTGGGTG CATATAGAAGCTGATAATTATCTGGCTCTTGCTGATGCTATATTTTGTGATTCAGATCCC AAAGAAGGACAGAAAAGGCAAGCTAATGAGACAAATCTTGATGCAGACCAATCTAACAAG AAGCTTAAGACAAAAAAGCGTTCTCAAAATCCTACATCCAAGATGCATGGCAATGACAAT AGAGAGTTTGTTGAAGCTCCACCACAGCAGGGACGAGGCACACTGTCTGCCCGAACTGTT AATGGGAAGAAAGTCACCAGGGCCCACTTGGAGTTGCCTTCTTCACAATTACTGATCAAG GAACCACATACATGCCCTAGCATTGCAAAGAATACAACAATTGTTGAAAATAATTCTGCT GTATTATGCCATGGTCAAGACCTTCAAACTTTTGAGGTCCCAGTAGCAACTACTTGTCCG CAAGTTGTAGCCCCCAGTACTCGCAAAGATGCACGTAGGACTTCTGGTGCTCGCCATGAT CAGAAGCATGAAGGTGTATCTGGTGCGCATGAAAGGAACAGGGCTGTTGCGTGTAGCAAC CAGGAAATTGTAAGCAGCAAGGATTCTCCATCCAACATTGAGGTAGTTTTGTCAAATTAT GGAGCTGGGAAACTATCATTCACATACAACTCTTCCCTGGCAAACCGTTCTGATTTTCAT CTGCCTGACATTAAATTAATTTGCAAGAAAATGGAGGCTAGATGCCTTAGGAAATACAAG AGCCTAGAACCCAATTTCTCTTTTAAGAATCTTATTAAAGATACTTGCCAGTGTATTGTT GAATCTAGTGGACCTAGACATGAAGGCATCATACAAACTGTTCCTGCCCTGGACATTCTG TCCAAACCTTCAGTGCCGCAAATATTGCAGTCAAATCAAGCTAATTCCGCTTTTATGCCA CCTAATAATGTCATGAGCCTTGGTGGTACTTCTTCCTCTTGCACTGTTGCTGGAGTTAGC CAGAATTCTAGTAATATGCCGGTTGTTCCGCATCAACTACATATTGGTGCCAACAGACCA CCTCATGATGTCAATGATATCACAAAAGGTGAAGAACGTTTAAGGATTCCAATTATTAAT GAATATGGCAATGGGATTCTTCCTCCTCCATTTCACTACATACCACACAATATCACACTC CAAGAAGCCTATGTAAACATCTCCCTTGCTAGAATCGGAGATGACAATTGCTGTTCTGAT TGTTTCAGAGATTGTCTGGCACAATCACTTCCTTGTGCGTGTGCTGCAGAAACAGGAGGA GAGTTTGCTTATACAACAGATGGCCTTCTTAAGGGAGCATTTCTAGATAGCTGTATCTCA ATGATTCGAGAACCACTTAAACATCCCCATTTCTACTGCAAGATTTGCCCAAACGAACGA ATGAAGATAGAAGTAAATTCTGATTCATCAAACACAGAAATGAATCCTGGTCCTTGTAAA GGACACCTTACAAGGAAATTCATCAAGGAGTGCTGGAGAAAATGCGGCTGCACTAGAAAT TGTGGAAACCGTGTGGTGCAGCGAGGCATCACACGCCATTTACAGGTGTTCTTAACCCCT GAAAAAAAAGGATGGGGATTGCGCAGTACTGAGAAACTTCCTCGAGGTGCTTTTGTTTGT GAGTATGTTGGTGAAATATTAACGAACATTGAGTTGTATGACCGTACAATTCAAAAGACT GGTAAAGCAAAGCACACATACCCATTGTTACTTGATGCCGACTGGGGTACTGAAGGTGTT CTTAAGGATGAGGAAGCCCTTTGTCTAGATGCCACGTTTTATGGTAACGTCGCAAGATTT ATAAACCACAGGTGCTTTGATGCTAATATTATAGGAATACCTGTTGAGATCGAGACGCCC GACCACCATTATTACCATCTGGCGTTCTTCACAACAAGGATAATAGAGCCTTTTGAGGAA CTCACATGGGACTATGGGATTGATTTTGATGATGTCGACCATCCTGTGAAGGCATTCAAA TGTCATTGCGGAAGTGAGTTTTGCCGAGACAAAACGCGCAGATCTAAATCGAGGGCGCGG GTTTAA

Peptide Sequence

PEP ID	Os02t0621100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:24708074:24717284:1 gene:Os02g0621100 transcript:Os02t0621100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 10 description:Similar to Su(VAR)3-9-related protein 4. (Os02t0621100-01)
Sequence	MAKPNGKEKTGDTGLSMAPPKISKDRFDAAIRAMADIGILKETAAPVLNNLLNLFDYNWV HIEADNYLALADAIFCDSDPKEGQKRQANETNLDADQSNKKLKTKKRSQNPTSKMHGNDN REFVEAPPQQGRGTLSARTVNGKKVTRAHLELPSSQLLIKEPHTCPSIAKNTTIVENNSA VLCHGQDLQTFEVPVATTCPQVVAPSTRKDARRTSGARHDQKHEGVSGAHERNRAVACSN QEIVSSKDSPSNIEVVLSNYGAGKLSFTYNSSLANRSDFHLPDIKLICKKMEARCLRKYK SLEPNFSFKNLIKDTCQCIVESSGPRHEGIIQTVPALDILSKPSVPQILQSNQANSAFMP PNNVMSLGGTSSSCTVAGVSQNSSNMPVVPHQLHIGANRPPHDVNDITKGEERLRIPIIN EYGNGILPPPFHYIPHNITLQEAYVNISLARIGDDNCCSDCFRDCLAQSLPCACAAETGG EFAYTTDGLLKGAFLDSCISMIREPLKHPHFYCKICPNERMKIEVNSDSSNTEMNPGPCK GHLTRKFIKECWRKCGCTRNCGNRVVQRGITRHLQVFLTPEKKGWGLRSTEKLPRGAFVC EYVGEILTNIELYDRTIQKTGKAKHTYPLLLDADWGTEGVLKDEEALCLDATFYGNVARF INHRCFDANIIGIPVEIETPDHHYYHLAFFTTRIIEPFEELTWDYGIDFDDVDHPVKAFK CHCGSEFCRDKTRRSKSRARV

Transcript Sequence

Transcript ID	Os02t0621100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:24708074:24717284:1 gene:Os02g0621100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 10 description:Similar to Su(VAR)3-9-related protein 4. (Os02t0621100-01)
Sequence	GCAGGTGGCGCCTCTAATTCCTCCTCCTCGCGCCCTAGTCCCCTCGCCTTCCCCTCCCGT CTCCTCGCCCGCCGGCCGCCGCCTGCGACGATCCCCATCCCGCGAGCGGCAGCGGTGCCG GCGGTCCTCTGCCGCACCCTCGCCGCGGTGAGCTCCCGGTCAGCAGTTTCCACATCTCAG CTAAGGACTGGAATGGCCAAACCCAATGGCAAAGAGAAAACGGGTGACACGGGATTGTCG ATGGCTCCTCCAAAGATTTCCAAGGATAGATTTGATGCTGCTATCAGAGCCATGGCTGAT ATTGGTATCCTAAAGGAAACTGCTGCGCCCGTGTTGAATAATCTACTAAACTTATTCGAT TACAACTGGGTGCATATAGAAGCTGATAATTATCTGGCTCTTGCTGATGCTATATTTTGT GATTCAGATCCCAAAGAAGGACAGAAAAGGCAAGCTAATGAGACAAATCTTGATGCAGAC CAATCTAACAAGAAGCTTAAGACAAAAAAGCGTTCTCAAAATCCTACATCCAAGATGCAT GGCAATGACAATAGAGAGTTTGTTGAAGCTCCACCACAGCAGGGACGAGGCACACTGTCT GCCCGAACTGTTAATGGGAAGAAAGTCACCAGGGCCCACTTGGAGTTGCCTTCTTCACAA TTACTGATCAAGGAACCACATACATGCCCTAGCATTGCAAAGAATACAACAATTGTTGAA AATAATTCTGCTGTATTATGCCATGGTCAAGACCTTCAAACTTTTGAGGTCCCAGTAGCA ACTACTTGTCCGCAAGTTGTAGCCCCCAGTACTCGCAAAGATGCACGTAGGACTTCTGGT GCTCGCCATGATCAGAAGCATGAAGGTGTATCTGGTGCGCATGAAAGGAACAGGGCTGTT GCGTGTAGCAACCAGGAAATTGTAAGCAGCAAGGATTCTCCATCCAACATTGAGGTAGTT TTGTCAAATTATGGAGCTGGGAAACTATCATTCACATACAACTCTTCCCTGGCAAACCGT TCTGATTTTCATCTGCCTGACATTAAATTAATTTGCAAGAAAATGGAGGCTAGATGCCTT AGGAAATACAAGAGCCTAGAACCCAATTTCTCTTTTAAGAATCTTATTAAAGATACTTGC CAGTGTATTGTTGAATCTAGTGGACCTAGACATGAAGGCATCATACAAACTGTTCCTGCC CTGGACATTCTGTCCAAACCTTCAGTGCCGCAAATATTGCAGTCAAATCAAGCTAATTCC GCTTTTATGCCACCTAATAATGTCATGAGCCTTGGTGGTACTTCTTCCTCTTGCACTGTT GCTGGAGTTAGCCAGAATTCTAGTAATATGCCGGTTGTTCCGCATCAACTACATATTGGT GCCAACAGACCACCTCATGATGTCAATGATATCACAAAAGGTGAAGAACGTTTAAGGATT CCAATTATTAATGAATATGGCAATGGGATTCTTCCTCCTCCATTTCACTACATACCACAC AATATCACACTCCAAGAAGCCTATGTAAACATCTCCCTTGCTAGAATCGGAGATGACAAT TGCTGTTCTGATTGTTTCAGAGATTGTCTGGCACAATCACTTCCTTGTGCGTGTGCTGCA GAAACAGGAGGAGAGTTTGCTTATACAACAGATGGCCTTCTTAAGGGAGCATTTCTAGAT AGCTGTATCTCAATGATTCGAGAACCACTTAAACATCCCCATTTCTACTGCAAGATTTGC CCAAACGAACGAATGAAGATAGAAGTAAATTCTGATTCATCAAACACAGAAATGAATCCT GGTCCTTGTAAAGGACACCTTACAAGGAAATTCATCAAGGAGTGCTGGAGAAAATGCGGC TGCACTAGAAATTGTGGAAACCGTGTGGTGCAGCGAGGCATCACACGCCATTTACAGGTG TTCTTAACCCCTGAAAAAAAAGGATGGGGATTGCGCAGTACTGAGAAACTTCCTCGAGGT GCTTTTGTTTGTGAGTATGTTGGTGAAATATTAACGAACATTGAGTTGTATGACCGTACA ATTCAAAAGACTGGTAAAGCAAAGCACACATACCCATTGTTACTTGATGCCGACTGGGGT ACTGAAGGTGTTCTTAAGGATGAGGAAGCCCTTTGTCTAGATGCCACGTTTTATGGTAAC GTCGCAAGATTTATAAACCACAGGTGCTTTGATGCTAATATTATAGGAATACCTGTTGAG ATCGAGACGCCCGACCACCATTATTACCATCTGGCGTTCTTCACAACAAGGATAATAGAG CCTTTTGAGGAACTCACATGGGACTATGGGATTGATTTTGATGATGTCGACCATCCTGTG AAGGCATTCAAATGTCATTGCGGAAGTGAGTTTTGCCGAGACAAAACGCGCAGATCTAAA TCGAGGGCGCGGGTTTAACCTATGAATTCTCTACTCTGCTATTCAAGTGATTCAAGGAAG TCAATGCAGAGCCATTGATGGTATCGTCCAGAAAGATGATATAGTAATTTTTCTCTGGAA TAGGATAAACAATCCAGATTCCAGAGTTACAGACTGCTGGTTCAGCACTTAAATATTCCA ACAGCTCATACGAACTGCTGTCCTTTTTTTCCAAGCTTGGTTGCCCGCAAAGCAGTATGC TTGGTTGCCCGTTCTTTGTTCCTTTTACCAATACCAAGTGATGTAAAGAATTCTGGAATG TGAACTCTCTGCCATGATATAGCTCTAGCTCAATGCATTATATTGGGGAA