Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0620500-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:24683709:24685205:1 gene:Os02g0620500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AMMONIUM TRANSPORTER-1; 3 description:Similar to Ammonium transporter Amt1;2 (Fragment). (Os02t0620500-00)
Sequence	ATGGCGACGTGCTTGGACAGCCTCGGGCCGCTGCTCGGCGGCGCGGCGAACTCCACCGAC GCGGCCAACTACATCTGCAACAGGTTCACGGACACCTCCTCCGCGGTGGACGCGACGTAC CTGCTCTTCTCGGCCTACCTCGTGTTCGCCATGCAGCTCGGGTTCGCCATGCTCTGCGCG GGCTCCGTCCGCGCCAAGAACTCCATGAACATCATGCTCACCAACGTGCTCGACGCCGCC GCCGGCGCGCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCGTTCGGGACGCCGTCCAAG GGCTTCATCGGGAAGCAGTTCTTCGGGCTGAAGCACATGCCGCAGACAGGGTACGACTAC GACTTCTTCCTCTTCCAGTGGGCCTTCGCCATCGCCGCCGCCGGCATCACGTCCGGTTCC ATCGCCGAGCGGACGCGCTTCAGCGCGTATCTCATCTACTCCGCCTTCCTCACCGGGTTC GTGTACCCGGTGGTGTCGCACTGGTTCTGGTCCACCGACGGGTGGGCTTCGGCCGGCCGG TTGACGGGTCCGTTGCTGTTCAAGTCGGGCGTCATCGACTTCGCCGGCTCCGGCGTCGTC CATCTGGTCGGTGGCATTGCTGGCCTGTGGGGTGCCTTCATCGAGGGCCCTCGCATCGGG CGGTTCGACGCCGCCGGCCGCACGGTGGCGATGAAAGGGCACAGCGCCTCACTGGTCGTG CTCGGCACCTTCCTGCTGTGGTTCGGGTGGTTCGGCTTCAACCCGGGGTCCTTCACCACC ATCTCCAAGATCTACGGCGAGTCGGGCACGATCGACGGGCAGTGGTCGGCGGTGGGCCGC ACCGCCGTGACGACGTCGCTGGCGGGGAGCGTCGCCGCGCTGACGACGCTCTACGGCAAG AGATGGCTGACGGGGCACTGGAACGTGACCGACGTCTGCAACGGTCTCCTCGGCGGCTTC GCCGCGATCACCGCGGGCTGCTCCGTGGTCGACCCGTGGGCGTCGGTGATCTGCGGGTTC GTGTCGGCGTGGGTCCTCATCGGCTGCAACAAGCTGTCGCTGATTCTCAAGTTCGACGAC CCGCTGGAGGCGACGCAGCTGCACGCCGGGTGCGGCGCGTGGGGGATCATCTTCACCGCG CTGTTCGCGCGCAGGGAGTACGTCGAGCTGATCTACGGGGTGCCGGGGAGGCCGTACGGG CTGTTCATGGGCGGCGGCGGGAGGCTTCTCGCGGCGCACATCGTGCAGATCCTGGTGATC GTCGGGTGGGTCAGCGCCACCATGGGGACGCTCTTCTACGTGCTGCACAGGTTCGGGCTG CTCCGCGTCTCGCCCGCGACAGAGATGGAAGGCATGGACCCGACGTGCCACGGCGGGTTC GGGTACGTGGACGAGGACGAAGGCGAGCGCCGCGTCAGGGCCAAGTCGGCGGCGGAGACG GCTCGCGTGGAGCCCAGAAAGTCGCCGGAGCAAGCCGCGGCGGGCCAGTTTGTGTAG

Peptide Sequence

PEP ID	Os02t0620500-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:24683709:24685205:1 gene:Os02g0620500 transcript:Os02t0620500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AMMONIUM TRANSPORTER-1; 3 description:Similar to Ammonium transporter Amt1;2 (Fragment). (Os02t0620500-00)
Sequence	MATCLDSLGPLLGGAANSTDAANYICNRFTDTSSAVDATYLLFSAYLVFAMQLGFAMLCA GSVRAKNSMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSKGFIGKQFFGLKHMPQTGYDY DFFLFQWAFAIAAAGITSGSIAERTRFSAYLIYSAFLTGFVYPVVSHWFWSTDGWASAGR LTGPLLFKSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDAAGRTVAMKGHSASLVV LGTFLLWFGWFGFNPGSFTTISKIYGESGTIDGQWSAVGRTAVTTSLAGSVAALTTLYGK RWLTGHWNVTDVCNGLLGGFAAITAGCSVVDPWASVICGFVSAWVLIGCNKLSLILKFDD PLEATQLHAGCGAWGIIFTALFARREYVELIYGVPGRPYGLFMGGGGRLLAAHIVQILVI VGWVSATMGTLFYVLHRFGLLRVSPATEMEGMDPTCHGGFGYVDEDEGERRVRAKSAAET ARVEPRKSPEQAAAGQFV

Transcript Sequence

Transcript ID	Os02t0620500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:24683709:24685205:1 gene:Os02g0620500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AMMONIUM TRANSPORTER-1; 3 description:Similar to Ammonium transporter Amt1;2 (Fragment). (Os02t0620500-00)
Sequence	ATGGCGACGTGCTTGGACAGCCTCGGGCCGCTGCTCGGCGGCGCGGCGAACTCCACCGAC GCGGCCAACTACATCTGCAACAGGTTCACGGACACCTCCTCCGCGGTGGACGCGACGTAC CTGCTCTTCTCGGCCTACCTCGTGTTCGCCATGCAGCTCGGGTTCGCCATGCTCTGCGCG GGCTCCGTCCGCGCCAAGAACTCCATGAACATCATGCTCACCAACGTGCTCGACGCCGCC GCCGGCGCGCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCGTTCGGGACGCCGTCCAAG GGCTTCATCGGGAAGCAGTTCTTCGGGCTGAAGCACATGCCGCAGACAGGGTACGACTAC GACTTCTTCCTCTTCCAGTGGGCCTTCGCCATCGCCGCCGCCGGCATCACGTCCGGTTCC ATCGCCGAGCGGACGCGCTTCAGCGCGTATCTCATCTACTCCGCCTTCCTCACCGGGTTC GTGTACCCGGTGGTGTCGCACTGGTTCTGGTCCACCGACGGGTGGGCTTCGGCCGGCCGG TTGACGGGTCCGTTGCTGTTCAAGTCGGGCGTCATCGACTTCGCCGGCTCCGGCGTCGTC CATCTGGTCGGTGGCATTGCTGGCCTGTGGGGTGCCTTCATCGAGGGCCCTCGCATCGGG CGGTTCGACGCCGCCGGCCGCACGGTGGCGATGAAAGGGCACAGCGCCTCACTGGTCGTG CTCGGCACCTTCCTGCTGTGGTTCGGGTGGTTCGGCTTCAACCCGGGGTCCTTCACCACC ATCTCCAAGATCTACGGCGAGTCGGGCACGATCGACGGGCAGTGGTCGGCGGTGGGCCGC ACCGCCGTGACGACGTCGCTGGCGGGGAGCGTCGCCGCGCTGACGACGCTCTACGGCAAG AGATGGCTGACGGGGCACTGGAACGTGACCGACGTCTGCAACGGTCTCCTCGGCGGCTTC GCCGCGATCACCGCGGGCTGCTCCGTGGTCGACCCGTGGGCGTCGGTGATCTGCGGGTTC GTGTCGGCGTGGGTCCTCATCGGCTGCAACAAGCTGTCGCTGATTCTCAAGTTCGACGAC CCGCTGGAGGCGACGCAGCTGCACGCCGGGTGCGGCGCGTGGGGGATCATCTTCACCGCG CTGTTCGCGCGCAGGGAGTACGTCGAGCTGATCTACGGGGTGCCGGGGAGGCCGTACGGG CTGTTCATGGGCGGCGGCGGGAGGCTTCTCGCGGCGCACATCGTGCAGATCCTGGTGATC GTCGGGTGGGTCAGCGCCACCATGGGGACGCTCTTCTACGTGCTGCACAGGTTCGGGCTG CTCCGCGTCTCGCCCGCGACAGAGATGGAAGGCATGGACCCGACGTGCCACGGCGGGTTC GGGTACGTGGACGAGGACGAAGGCGAGCGCCGCGTCAGGGCCAAGTCGGCGGCGGAGACG GCTCGCGTGGAGCCCAGAAAGTCGCCGGAGCAAGCCGCGGCGGGCCAGTTTGTGTAG