Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0617300-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:24488773:24501969:-1 gene:Os02g0617300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157A06.7 protein. (Os02t0617300-01);Armadillo-like helical domain containing protein. (Os02t0617300-02)
Sequence	ATGGAGGCGGCGCTGGAGGCGGCGCGCGCCAAGGACACGAAGCAGCGGCTGGCCGGGGTG GAGCGGCTCCACGAGGCGCTGGAGGCCGCGGCGAGGCGAGGGCTGACGTCGGCCGAGGTG ACGTCGCTGGTCGACGCCTGCATGGATCTGACCAAGGACGGCAACTTCCGCGTCGCCCAG GGCGGCCTGCAGGCGCTCTCCGCCGCCGCGGTGCTCGCCGGCGACCACTTCAAGATCCAC CTCAACGCCCTCGTGCCCGCCGCCGTCGAGCGGCTGGGCGACGGCAAGCAGCCCGTCCGA GACGCCGCCAGGCAGCTGCTTGTCACCCTCATGGAGGTTTCATCACCGACAATCATTGTT GAAAGAGCTGGAAGTTATGCATGGACTCACAAGAGCTGGAGGGTGCGGGAAGAATTTGTA CGCACTGTTGCAACAGCTGTTGGCCTCTTTGCTTCTACAGAGCTCCCTCTACAGCGAGTG TTGCTTTCACCTGTCCTGCAATTGCTGAACGATTTGAATCAAAGTGTTAGAGACGCTGCA ATCTCATGTATTGAGGAGATGTATAGAAACATGGGATCTCAATTCCATGAAGAGTTGCAG CGCCATAATCTGCCTTCTTACATGCTGAAGGACATAAATTCAAGATTGGATAAAATAGAA CCAAAGGCTCGCTCATCTGATGGTGCTAGAATGCAATATAAGGTTATTGAAAGATCTGTA AGTGCTAATGCAAAAAGAGGCAGTCCAAGGAAAAAAAGTTCAACAAGGGAAAGCACATTA TTTGGAGGTGACTCAGATATTACCGAAAAACCAGTGGAACCCATAAGAGTACATTCAGAG AAAGAATTACTTAGGGAGATGGAGAAGATTGCATCTGCCCTTGATCCAGAAAAGGACTGG TCTATACGTATTGCCGCAATGCAAAGGATTGAAGCCTTGGTATATGGAGGTGCAATTGAT TATCCATCATTTCTTACGCTCCTGAAGCAGCTAGTTCCTCCCTTATCTGCTCAGCTGTCT GACCGACGGTCTAGCATAGTAAAACAGGCATGCCATCTACTTAATATGCTATCAAAAGAA CTCCTTGGTGATTTTGAAGCATGTGCTGAAATATTTATTCCGGTACTTTTCAAGCTTGTT GTGATAACTGTGCTTGTTATTGCTGAATCCGCCGACAACTGCATAAAAACTATCCTGCGG AACTGCAAGGTTTCACGTATTCTTCCACTTATAGCTGACACGGCAAAGAATGATCGCAGC GCTATCCTTCGTGCTAGATGTAGTGAGTATGCCATCCTAATATTGGAATATTGGGCAGAT GCTCCTGAAATACAGCGTGCATCTGATATATACGAAGATCTAATAAAATGCTGTGTGGCT GATGCAATGAGTGAGGTCCGTGCAACTGCAAGATCTTGCTATAGGATGTTCACCAAGACA TGGCCTGAGCGCTCACGTCGGCTTTTTATGTCATTTGATCCTGCAGTACAAAGGATAATA AATGATGAAGACGGGGGCCTGCAGAAACGGTATCCTTCTCCATCATTGCGTGAGAAGGGT GTCCAACTTTCTCATGCTTCATCTCATGCAAGTGGTACACATTTAGCCGGATACAGCACT TCAGCTATTGTTGCGATGGACAAGAGTGCAGCTATTTCTTCTGAATCATCTCTTTCGTCA AGAAGTCTTCTGTCGCAGTCAAAGAAAATAGGTAGAACTGCTGAAAGAAGCATAGAGAGC GTTCTCAGTTCAAGTAAACAAAAGGTTTCTGCCATTGAAAGTTTATTGAAGGGTGTAAGC GGCCGGCAAAATTTCTCAGCTATGCGCTCAACAAGCTTGGATCTTGGAGTTGATCCTCCA TCCTCTCGTGATCCTCCTATCCCACTTGCTGCAACTGCTTCGGACCATCTGTCTTTGCAG AATTCCATATTGCTGGATTCATCCCTGCCAAGCATTAATAACACAAGAAATGGTGGTTCA CGCTTGGTAGATACAGTGAACCCTCATGTGGCCAATAAAGAGAGGTCAAGGTCACCATAT TTGAGTAGTCTGTCGTCTGAATCAATATCAGGATCGTCACTGCCTTATGCGAGAAGCTCT TCTGGGAGGTCTCCATATGGTAGCACTATGGAAGAGAGTAATGATACATGGTCAACCAGG CGGATGCCACAAATGCAGATGGACAGACACTATCTTGATATGACCTATAGGGATGCCAGC CACAGAAAGGCATTCAAGAAGTTATGCAGAATTTTGAAAAGGTCATGA

Peptide Sequence

PEP ID	Os02t0617300-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:24488773:24501969:-1 gene:Os02g0617300 transcript:Os02t0617300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157A06.7 protein. (Os02t0617300-01);Armadillo-like helical domain containing protein. (Os02t0617300-02)
Sequence	MEAALEAARAKDTKQRLAGVERLHEALEAAARRGLTSAEVTSLVDACMDLTKDGNFRVAQ GGLQALSAAAVLAGDHFKIHLNALVPAAVERLGDGKQPVRDAARQLLVTLMEVSSPTIIV ERAGSYAWTHKSWRVREEFVRTVATAVGLFASTELPLQRVLLSPVLQLLNDLNQSVRDAA ISCIEEMYRNMGSQFHEELQRHNLPSYMLKDINSRLDKIEPKARSSDGARMQYKVIERSV SANAKRGSPRKKSSTRESTLFGGDSDITEKPVEPIRVHSEKELLREMEKIASALDPEKDW SIRIAAMQRIEALVYGGAIDYPSFLTLLKQLVPPLSAQLSDRRSSIVKQACHLLNMLSKE LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTILRNCKVSRILPLIADTAKNDRS AILRARCSEYAILILEYWADAPEIQRASDIYEDLIKCCVADAMSEVRATARSCYRMFTKT WPERSRRLFMSFDPAVQRIINDEDGGLQKRYPSPSLREKGVQLSHASSHASGTHLAGYST SAIVAMDKSAAISSESSLSSRSLLSQSKKIGRTAERSIESVLSSSKQKVSAIESLLKGVS GRQNFSAMRSTSLDLGVDPPSSRDPPIPLAATASDHLSLQNSILLDSSLPSINNTRNGGS RLVDTVNPHVANKERSRSPYLSSLSSESISGSSLPYARSSSGRSPYGSTMEESNDTWSTR RMPQMQMDRHYLDMTYRDASHRKAFKKLCRILKRS

Transcript Sequence

Transcript ID	Os02t0617300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:24488773:24501969:-1 gene:Os02g0617300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157A06.7 protein. (Os02t0617300-01);Armadillo-like helical domain containing protein. (Os02t0617300-02)
Sequence	TTTCCCCCAAAAATCATCGCGAGCGCGCGACCCAACCACCGCCTACTGGTCGCCGCCGCC GCCGCCGCCGGTGAGGAGTAGGAGGAGGAGGAAGCTTCGGTCGGTTGGTTGTCGGGTGGG GGTGGGGCGGAGATGGAGGCGGCGCTGGAGGCGGCGCGCGCCAAGGACACGAAGCAGCGG CTGGCCGGGGTGGAGCGGCTCCACGAGGCGCTGGAGGCCGCGGCGAGGCGAGGGCTGACG TCGGCCGAGGTGACGTCGCTGGTCGACGCCTGCATGGATCTGACCAAGGACGGCAACTTC CGCGTCGCCCAGGGCGGCCTGCAGGCGCTCTCCGCCGCCGCGGTGCTCGCCGGCGACCAC TTCAAGATCCACCTCAACGCCCTCGTGCCCGCCGCCGTCGAGCGGCTGGGCGACGGCAAG CAGCCCGTCCGAGACGCCGCCAGGCAGCTGCTTGTCACCCTCATGGAGGTTTCATCACCG ACAATCATTGTTGAAAGAGCTGGAAGTTATGCATGGACTCACAAGAGCTGGAGGGTGCGG GAAGAATTTGTACGCACTGTTGCAACAGCTGTTGGCCTCTTTGCTTCTACAGAGCTCCCT CTACAGCGAGTGTTGCTTTCACCTGTCCTGCAATTGCTGAACGATTTGAATCAAAGTGTT AGAGACGCTGCAATCTCATGTATTGAGGAGATGTATAGAAACATGGGATCTCAATTCCAT GAAGAGTTGCAGCGCCATAATCTGCCTTCTTACATGCTGAAGGACATAAATTCAAGATTG GATAAAATAGAACCAAAGGCTCGCTCATCTGATGGTGCTAGAATGCAATATAAGGTTATT GAAAGATCTGTAAGTGCTAATGCAAAAAGAGGCAGTCCAAGGAAAAAAAGTTCAACAAGG GAAAGCACATTATTTGGAGGTGACTCAGATATTACCGAAAAACCAGTGGAACCCATAAGA GTACATTCAGAGAAAGAATTACTTAGGGAGATGGAGAAGATTGCATCTGCCCTTGATCCA GAAAAGGACTGGTCTATACGTATTGCCGCAATGCAAAGGATTGAAGCCTTGGTATATGGA GGTGCAATTGATTATCCATCATTTCTTACGCTCCTGAAGCAGCTAGTTCCTCCCTTATCT GCTCAGCTGTCTGACCGACGGTCTAGCATAGTAAAACAGGCATGCCATCTACTTAATATG CTATCAAAAGAACTCCTTGGTGATTTTGAAGCATGTGCTGAAATATTTATTCCGGTACTT TTCAAGCTTGTTGTGATAACTGTGCTTGTTATTGCTGAATCCGCCGACAACTGCATAAAA ACTATCCTGCGGAACTGCAAGGTTTCACGTATTCTTCCACTTATAGCTGACACGGCAAAG AATGATCGCAGCGCTATCCTTCGTGCTAGATGTAGTGAGTATGCCATCCTAATATTGGAA TATTGGGCAGATGCTCCTGAAATACAGCGTGCATCTGATATATACGAAGATCTAATAAAA TGCTGTGTGGCTGATGCAATGAGTGAGGTCCGTGCAACTGCAAGATCTTGCTATAGGATG TTCACCAAGACATGGCCTGAGCGCTCACGTCGGCTTTTTATGTCATTTGATCCTGCAGTA CAAAGGATAATAAATGATGAAGACGGGGGCCTGCAGAAACGGTATCCTTCTCCATCATTG CGTGAGAAGGGTGTCCAACTTTCTCATGCTTCATCTCATGCAAGTGGTACACATTTAGCC GGATACAGCACTTCAGCTATTGTTGCGATGGACAAGAGTGCAGCTATTTCTTCTGAATCA TCTCTTTCGTCAAGAAGTCTTCTGTCGCAGTCAAAGAAAATAGGTAGAACTGCTGAAAGA AGCATAGAGAGCGTTCTCAGTTCAAGTAAACAAAAGGTTTCTGCCATTGAAAGTTTATTG AAGGGTGTAAGCGGCCGGCAAAATTTCTCAGCTATGCGCTCAACAAGCTTGGATCTTGGA GTTGATCCTCCATCCTCTCGTGATCCTCCTATCCCACTTGCTGCAACTGCTTCGGACCAT CTGTCTTTGCAGAATTCCATATTGCTGGATTCATCCCTGCCAAGCATTAATAACACAAGA AATGGTGGTTCACGCTTGGTAGATACAGTGAACCCTCATGTGGCCAATAAAGAGAGGTCA AGGTCACCATATTTGAGTAGTCTGTCGTCTGAATCAATATCAGGATCGTCACTGCCTTAT GCGAGAAGCTCTTCTGGGAGGTCTCCATATGGTAGCACTATGGAAGAGAGTAATGATACA TGGTCAACCAGGCGGATGCCACAAATGCAGATGGACAGACACTATCTTGATATGACCTAT AGGGATGCCAGCCACAGAAAGGCATTCAAGAAGTTATGCAGAATTTTGAAAAGGTCATGA AGTTATTTTTCCGTTATTTGGATGATCCTCATCACAAAGTTGCACAGGCAGCTTTCTCTA CACTTGCAGATATTATTCCAGCTTGCAAGAAGCAATTTGAGAGCTATGTTGAAAGAATTT TACCGTATGTATTTTCAAGACTTATTGATCCAAAGGAATTAGTTAGGCAACCATGTTCAT CAACCTTGGAAGTTGTTGGCCGCACATATCCCATTGACACATTGCTACCTGCTCTAGTAC GTTCACTGGATGAACAAAGGTCTCCAAAAGCAAAACTGGCTGTTCTTGAGTTTGCTAATA AGTCATTCAGCAGGTACAAAGTAGACTCAGAAGGTTATAGTAACAGTGGCTTTCTTAAGC TATGGCTTTCAAAGCTAGCACCTTTAATACATGAAAAGAATGCAAAGTTGAAGGAAACTT CCATTTCTGGAATCATAGCAGTTTATTCTCATTTTGACTCAACAGCGGTTCTAAATTTTA TTTTAAATTTGTCTATTGAAGAACAAAACCTTGTGAGGCGAGCACTGAAGCAATATACTC CTCGTATCGAGGTCGATCTGGTAAATTACTTGCAGAGCAAAAAAGAACGTTCACGTCCCA AATCTTATGACCAAGTTGATTTTGGAAATTCTTCTGAAGATGGTTATGCACTGACACCAA AGAGTAGTTATGCATTTGGGCGGTTTTCTGCTAGTTCCCTTGATAATGCATCAGGGAAGA AGATGAATATGGTTCATGGATCAATATTCCTTGATATTTCTACTGGCCGAACATCCTCTG ATGTCAGCATTGATAATGTTAAGCAATGTTTCAAACCTGAAGCTGAAGTTCTTGCAACAA GTAGGGAATCAAAGAACATTGCTCGCACAGTTGTAGAAGCTGCACGTTCATGGACAGACT ATCCTGGAAAATCAGATGCTACCATTGATGATGAAAATTCTACTGGTACTCCTCGTCTGG AGTTTGGTCGTCTTGCTGTTTCTGATGGACGTGGTGCTGTTATTTCAACTTCTGTGGAAG ACGCTCAAGAGGGAAATCCACTTGTGGAGCTTAGTTCTGTGAAGATTACCCCACACACCA GTAATGGCCCTAGCATCCCACAACTTATTCATCAGATAAGCAATGTCAGTGAAGTTACTA GTCTAGACAAGCGGGAGGCATTACAACAGTTGGTTACAGCTTCCACCAATAATGACAACT CTATATGGACTAAGTATTTCAATCAAATTTTAACAACCATCCTTGAGGTGTTGGATGACT CGGATTCTTCTATCAGGGAGCTTTCTCTATCGTTAGTTGCTGAGATGCTCCACAACCAGA AAGATCCTATGGAAGAATCCATTGAGATTGTCCTTGAAAAGCTCCTACATGTGACCAAGG ATGTCGTGGCGAAGGTTTCAAATGAAGCAAACCAGTGCTTAAATGTCGTGTTGGCAAAAT ATGATCCTTTTAGATGCCTTGCTGTTATTGTACCTTTGTTGGTTAGTGATGATGAAAAGA TGCTTGTCGTGTGTACCAACTGTTTGACAAAGCTTGTTGGACGCCTATCAGAGGAGGAAT TAATGACTCAACTGCCTTCATTTTTACCAGCACTTTTTGATGCTTTCAATAACCAGAGTC CAGATGTTCGCAAGACTGTTGTATTCTGCTTGGTGGATATCTACATTATGCTTGGGAAAG CATTTGTACCATATCTAGAGGGGCTTAATAGCACGCAGCTGCGCCTAGTAACAATCTATG CAAACAGGATATCACAGGCAAGGTCTGGTGCACCGATTGATGCTAACCACTAGATCATAT TGTTTTGTGTATCATATGGGTATCTCTTTGGATGAGCTGGTTTCATTCATTCGATCTGTA TATAACAGACAGATGCCGTTCATGTATTGAGCAGTTGGCTTTTCGTGTGTGTATGTATTC CTTTTATTTTTGTTTCCTTTTCCCCTTGTGTGCAGAGGCATTGAGTTATGCGTTAACTTG TACTACCATCACACTGTACAAAGATAACAGGATGTAGCTGACTGTTTTCCCTTGTTTACC TGAGGGGTTTGTTGGTGGGCATATCCTTGTGCTGTAAACATTGGGTGTGCCGGAAACAGA GAATTTGCTCAACAGATCCTTGAATGGTTTTGCTT