Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0616100-04
CDS Infomation	cds chromosome:IRGSP-1.0:2:24372812:24374397:1 gene:Os02g0616100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein binding protein. (Os02t0616100-01);Similar to protein binding protein. (Os02t0616100-04);Similar to protein binding protein. (Os02t0616100-06);Similar to protein binding protein. (Os02t0616100-07)
Sequence	ATGGCTTGCCACTTGAGATTATTTCCCTTTACTCAACTACTAGTATTGGTTCTGTACAAA ATCGCCGCCGTAGGGGCAGATCCTGCAAACGCAGAACTATCCACAAAGATCACCCAACAC TCTCCATTGTACAACCCACAGCCTCAAGACTTTCCAAACGAGGAGCTCTACCGCAACTAT CTAGTCATCCAGCGGTTCAAGAAGACAATCACTTCCGACCCCAAGAACATCACCGCCACC TGGACCGGCCATGACATCTGCGGCAACACGACCTACCTCGGTTTCTACTGTGCAGCATTG CCTGGGCGTACTAAGAAGCCCACGGTCACTGTGGTGATCTTTAACGGTTATGGCCTGCGT GCACCGAAGCTGGAAGGATTTATTGACCATCTCCCCGATCTTGCACTTTTCCATGCTGCC TCCAACGACTTCGGTGGTGACATCCCCTACCTCACAGGCCTCGCCTACAACTACAAGATC AATGTCGACAGCAATCTCCAAATACAGGATGATTTTAGTCGTGACATGGTCGGGTCGCAT GTAACAACTAAAGTTCATGGTTATTGCGTTAATTTAGATCTAGATATCACATTTCACCTC CGGCCCGGAAAAGACGACAAGAAAGGACGAAGCATCCCCGGTGCCACAGATTCTAAGGCG CTCCTCCTCAACTACAATCACCTGTCCGGGCCATTACCGGTGAACATCGGTTTCTCCAAG TTAAGCTACCTGGCCCTCGCCAACAACAGGCTCACCGGCGCAATCCCGCCATCAATCTTG CATTTGCAAGACTCCCTCCTCGAGGTGCTCCTCCTGAACAACCAGCTCTCCGGCTGCCTC CCCCACGAGCTCGGCATGCTCACCAAGGCCGCAGTGTTCGACGCCGGCATGAACCAGCTC ACCGGGCCGATCCCCTCCTCTTTCTCATGCCTCACCAGCGTCGAGCAGCTCAACCTGGGC GGCAACCGCCTCTACGGAGAGATCCCCGAGCGCCACCCACGTGGCGTGCCCCGCCGGAGC TGCCAACGCTGCGGCGGCGCCGGCGGACAGGGTGGTCAAGGACTACTCCAGCTACGTGAC GTACGCCACCCTGCACGAGTGAGCCCGGCGCCACGGCACGGGCGCACGACGTGCGTGCAT GCATGCAGTAGGGGACAGCTAGAAGCTAGCGTCTCGGGGTGGTATTTGCTCTTGTATTCT TGTGTTCGTTTGTTGTGCTCGTGA

Peptide Sequence

PEP ID	Os02t0616100-04
PEP Infomation	pep chromosome:IRGSP-1.0:2:24372812:24374397:1 gene:Os02g0616100 transcript:Os02t0616100-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein binding protein. (Os02t0616100-01);Similar to protein binding protein. (Os02t0616100-04);Similar to protein binding protein. (Os02t0616100-06);Similar to protein binding protein. (Os02t0616100-07)
Sequence	MACHLRLFPFTQLLVLVLYKIAAVGADPANAELSTKITQHSPLYNPQPQDFPNEELYRNY LVIQRFKKTITSDPKNITATWTGHDICGNTTYLGFYCAALPGRTKKPTVTVVIFNGYGLR APKLEGFIDHLPDLALFHAASNDFGGDIPYLTGLAYNYKINVDSNLQIQDDFSRDMVGSH VTTKVHGYCVNLDLDITFHLRPGKDDKKGRSIPGATDSKALLLNYNHLSGPLPVNIGFSK LSYLALANNRLTGAIPPSILHLQDSLLEVLLLNNQLSGCLPHELGMLTKAAVFDAGMNQL TGPIPSSFSCLTSVEQLNLGGNRLYGEIPERHPRGVPRRSCQRCGGAGGQGGQGLLQLRD VRHPARVSPAPRHGRTTCVHACSRGQLEASVSGWYLLLYSCVRLLCS

Transcript Sequence

Transcript ID	Os02t0616100-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:24372812:24374397:1 gene:Os02g0616100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein binding protein. (Os02t0616100-01);Similar to protein binding protein. (Os02t0616100-04);Similar to protein binding protein. (Os02t0616100-06);Similar to protein binding protein. (Os02t0616100-07)
Sequence	ATAGACGATTTTATCGATGAACCTGAAATAGACATGGCTTGCCACTTGAGATTATTTCCC TTTACTCAACTACTAGTATTGGTTCTGTACAAAATCGCCGCCGTAGGGGCAGATCCTGCA AACGCAGAACTATCCACAAAGATCACCCAACACTCTCCATTGTACAACCCACAGCCTCAA GACTTTCCAAACGAGGAGCTCTACCGCAACTATCTAGTCATCCAGCGGTTCAAGAAGACA ATCACTTCCGACCCCAAGAACATCACCGCCACCTGGACCGGCCATGACATCTGCGGCAAC ACGACCTACCTCGGTTTCTACTGTGCAGCATTGCCTGGGCGTACTAAGAAGCCCACGGTC ACTGTGGTGATCTTTAACGGTTATGGCCTGCGTGCACCGAAGCTGGAAGGATTTATTGAC CATCTCCCCGATCTTGCACTTTTCCATGCTGCCTCCAACGACTTCGGTGGTGACATCCCC TACCTCACAGGCCTCGCCTACAACTACAAGATCAATGTCGACAGCAATCTCCAAATACAG GATGATTTTAGTCGTGACATGGTCGGGTCGCATGTAACAACTAAAGTTCATGGTTATTGC GTTAATTTAGATCTAGATATCACATTTCACCTCCGGCCCGGAAAAGACGACAAGAAAGGA CGAAGCATCCCCGGTGCCACAGATTCTAAGGCGCTCCTCCTCAACTACAATCACCTGTCC GGGCCATTACCGGTGAACATCGGTTTCTCCAAGTTAAGCTACCTGGCCCTCGCCAACAAC AGGCTCACCGGCGCAATCCCGCCATCAATCTTGCATTTGCAAGACTCCCTCCTCGAGGTG CTCCTCCTGAACAACCAGCTCTCCGGCTGCCTCCCCCACGAGCTCGGCATGCTCACCAAG GCCGCAGTGTTCGACGCCGGCATGAACCAGCTCACCGGGCCGATCCCCTCCTCTTTCTCA TGCCTCACCAGCGTCGAGCAGCTCAACCTGGGCGGCAACCGCCTCTACGGAGAGATCCCC GAGCGCCACCCACGTGGCGTGCCCCGCCGGAGCTGCCAACGCTGCGGCGGCGCCGGCGGA CAGGGTGGTCAAGGACTACTCCAGCTACGTGACGTACGCCACCCTGCACGAGTGAGCCCG GCGCCACGGCACGGGCGCACGACGTGCGTGCATGCATGCAGTAGGGGACAGCTAGAAGCT AGCGTCTCGGGGTGGTATTTGCTCTTGTATTCTTGTGTTCGTTTGTTGTGCTCGTGAGTC GTCATTGTGGTTTGTTTTCTCTGCACGTGTGGCTAGCTATGGCTGTCACGTCTAGATCTC ACCTCCTGTACTCTTGTGTACTGTACTATGTGAAAATCATTGGTGATTACT