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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0613900-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:24223305:24228713:1 gene:Os02g0613900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Adenine phosphoribosyltransferase 2 (EC 2.4.2.7) (APRT). (Os02t0613900-01);Similar to adenine phosphoribosyltransferase 2. (Os02t0613900-02)
Sequence

ATGGGCGAGGAGGCCAATTGCAACGTCGCGATGGAGTCCGCTGCGCCCAAGGAGAACGGC
CACACCACCGGTGGCGCCGCGGCGGAGGCCAAGGCCGCCGCCGCCTGGGCTGAGATCGCC
GTCACCGACGCCGCGGCGGTGCCAAAGCCGACGCCGCCGCCTGCGGCCGTGGCCGTCGAC
CCCCGGCTTCAGGGCATCTCCGACGCCATCCGCGTCGTCCCCCACTTCCCCAAGCAAGGC
ATCATGTTCAACGACATCACGCCGCTGCTGCTGCGCCCGGGGGTGTTCAAGGACGCCGTC
GACATCTTCGTCGAGCGCTACCGCGGCATGGCCATCGCCGCCGTCGCCGGGATTGAGGCT
AGGGGGTTCATATTTGGCCCGGCGATCGCGCTGGCAATTGGCGCCAAATTCATACCGTTG
CGTAAGCCCAAGAAACTCCCAGGCGAGGTGATTTCTGAGACGTATGTTCTCGAGTACGGG
ACCGATTGCTTGCAGATGCATGTTGGCGCCATTGAACCTGGTGAGCGTGTGCTGATCGTT
GATGATCTGGTTGCAACTGGTGGGACACTTTGTGCTGCTATAAGGCTTCTTGAACGCGCT
GGAGCTGACGTTGTTGAGTGCGCGTGTCTCATTGGGCTCCCAAAATTTAAGGATTTCTAC
AAGCTCAATGGCAAACCAGTTTATGTGCTGGTGGAGTCCCGCGAATATGAAAAATAA

Peptide Sequence

PEP ID

Os02t0613900-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:24223305:24228713:1 gene:Os02g0613900 transcript:Os02t0613900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Adenine phosphoribosyltransferase 2 (EC 2.4.2.7) (APRT). (Os02t0613900-01);Similar to adenine phosphoribosyltransferase 2. (Os02t0613900-02)
Sequence

MGEEANCNVAMESAAPKENGHTTGGAAAEAKAAAAWAEIAVTDAAAVPKPTPPPAAVAVD
PRLQGISDAIRVVPHFPKQGIMFNDITPLLLRPGVFKDAVDIFVERYRGMAIAAVAGIEA
RGFIFGPAIALAIGAKFIPLRKPKKLPGEVISETYVLEYGTDCLQMHVGAIEPGERVLIV
DDLVATGGTLCAAIRLLERAGADVVECACLIGLPKFKDFYKLNGKPVYVLVESREYEK

Transcript Sequence

Transcript ID

Os02t0613900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:24223305:24228713:1 gene:Os02g0613900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Adenine phosphoribosyltransferase 2 (EC 2.4.2.7) (APRT). (Os02t0613900-01);Similar to adenine phosphoribosyltransferase 2. (Os02t0613900-02)
Sequence

GTCCACCCCCCGTAACATTAACTCCTTTGTTCAGCTTGACACTCCATTGCAGAGGGAGGG
TATAGCTGGTGACAGAGAGAAATGGGCGAGGAGGCCAATTGCAACGTCGCGATGGAGTCC
GCTGCGCCCAAGGAGAACGGCCACACCACCGGTGGCGCCGCGGCGGAGGCCAAGGCCGCC
GCCGCCTGGGCTGAGATCGCCGTCACCGACGCCGCGGCGGTGCCAAAGCCGACGCCGCCG
CCTGCGGCCGTGGCCGTCGACCCCCGGCTTCAGGGCATCTCCGACGCCATCCGCGTCGTC
CCCCACTTCCCCAAGCAAGGCATCATGTTCAACGACATCACGCCGCTGCTGCTGCGCCCG
GGGGTGTTCAAGGACGCCGTCGACATCTTCGTCGAGCGCTACCGCGGCATGGCCATCGCC
GCCGTCGCCGGGATTGAGGCTAGGGGGTTCATATTTGGCCCGGCGATCGCGCTGGCAATT
GGCGCCAAATTCATACCGTTGCGTAAGCCCAAGAAACTCCCAGGCGAGGTGATTTCTGAG
ACGTATGTTCTCGAGTACGGGACCGATTGCTTGCAGATGCATGTTGGCGCCATTGAACCT
GGTGAGCGTGTGCTGATCGTTGATGATCTGGTTGCAACTGGTGGGACACTTTGTGCTGCT
ATAAGGCTTCTTGAACGCGCTGGAGCTGACGTTGTTGAGTGCGCGTGTCTCATTGGGCTC
CCAAAATTTAAGGATTTCTACAAGCTCAATGGCAAACCAGTTTATGTGCTGGTGGAGTCC
CGCGAATATGAAAAATAAAGAGATTGATGATCAGGAATGCACATGGCTTCATTCCTTACA
AATTGCAAGTGAGCGCTGGACGGATATCGACAAGTCTGCGGTACATTATTAAGGCTAAGC
TAGCTGCTAAGTATTAGAGGGGAGGTGAGAGAGAGCGAGAGAGAGAGAGATTGGTGAGTG
GGGAGTAGTTCTTGTAGGCTGAGTAGTACTAGTTTTTTCAGGGGCACTGAAAAAAGAGCT
TGTAGTTTCTGTCGGGAACACCGATTACTAGCTGAAACATCATC