Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0612900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:24152119:24153073:-1 gene:Os02g0612900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Temperature stress-induced lipocalin. (Os02t0612900-01)
Sequence

ATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTG
GACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAG
CCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTG
GACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCC
TACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCC
TTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTAC
CAGTACGCGCTCGTCGGCGAGCCGCGGCGCAAGGACCTGTGGATCCTGTGCCGGCAGACG
AGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGAC
GTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGCGCCC
ACCGACACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGA

Peptide Sequence

PEP ID

Os02t0612900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:24152119:24153073:-1 gene:Os02g0612900 transcript:Os02t0612900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Temperature stress-induced lipocalin. (Os02t0612900-01)
Sequence

MAAAAVEKKSGSEMTVVRGLDVARYMGRWYEIASLPNFFQPRDGRDTRATYALRPDGATV
DVLNETWTSSGKRDYIKGTAYKADPASDEAKLKVKFYLPPFLPVIPVVGDYWVLYVDDDY
QYALVGEPRRKDLWILCRQTSMDDEVYGRLLEKAKEEGYDVEKLRKTPQDDPPPESDAAP
TDTKGTWWFKSLFGK

Transcript Sequence

Transcript ID

Os02t0612900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:24152119:24153073:-1 gene:Os02g0612900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Temperature stress-induced lipocalin. (Os02t0612900-01)
Sequence

AGCTTCTTCAGTTCTTCTCCAAACCCAACCCCCCCAAGAGGCCAAAACCCTCTCCTATAT
AGCCACACTCATCCTTGCAATTAGCTCAACTCAGCTCAAGTTGGCAATTCATATCAAACA
GATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGAC
GATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCT
GGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCA
GCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGT
GGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGC
CTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCC
CTTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTA
CCAGTACGCGCTCGTCGGCGAGCCGCGGCGCAAGGACCTGTGGATCCTGTGCCGGCAGAC
GAGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGA
CGTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGCGCC
CACCGACACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTC
TCAGCGGCCGATGGATGGATCAGAGGACGACGATGTATAGCTATAGTATGAATTTGCCTT
CAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGT
GTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACTCTTACACGTGCTT