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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0612100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:24095882:24097710:1 gene:Os02g0612100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid methyltransferase family protein. (Os02t0612100-01)
Sequence

ATGGAAATGGCGGCGGCGGCCGTCGGCGTGCTGCTGCCGTTCCCGTTCTACTGGGCGCTC
TGGAACCACCCGCAGCGGTGGGTCGACCTGTGCGGCGGAGGCGGCGGCGGCGTGGACCCG
TGCCGCCGGATGGCGCAGGTGTCCCACGTCCTCAAGGCGCTGCAGCTCCTCGCCCTCGCC
TCCGTCGCCTCCTTCTCCTGGCCGCCGCCGCTCTACTCCGTCGCCCTCCTCGCCGTCGGC
CAGTACCTCAATTTCAAGGTGTACCAGCTGCTCGGTGAGCCAGGCACCTACTACGGTGTT
CGATTTGGAAAGAAAATCCCATGGGTGACAGAATTTCCATTTGGTTATATCAAAGACCCT
CAATATGTTGGCAGCATGCTCAGCCTTGTGGCACTGCTTTGTTGGGTTCCATTCCAATAT
GTTCTTCTCTGGTGCCTCGGCTACGTTTTCATGATGTGGGTGGAAAGCAAGGAAGATCCT
GCCACTCGTGCCAAGCTGCTCTCCTGA

Peptide Sequence

PEP ID

Os02t0612100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:24095882:24097710:1 gene:Os02g0612100 transcript:Os02t0612100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid methyltransferase family protein. (Os02t0612100-01)
Sequence

MEMAAAAVGVLLPFPFYWALWNHPQRWVDLCGGGGGGVDPCRRMAQVSHVLKALQLLALA
SVASFSWPPPLYSVALLAVGQYLNFKVYQLLGEPGTYYGVRFGKKIPWVTEFPFGYIKDP
QYVGSMLSLVALLCWVPFQYVLLWCLGYVFMMWVESKEDPATRAKLLS

Transcript Sequence

Transcript ID

Os02t0612100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:24095882:24097710:1 gene:Os02g0612100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid methyltransferase family protein. (Os02t0612100-01)
Sequence

CCACGAGCCCCTCGTGACCGCTCTGCCTTCGACAACGAGATGGAAATGGCGGCGGCGGCC
GTCGGCGTGCTGCTGCCGTTCCCGTTCTACTGGGCGCTCTGGAACCACCCGCAGCGGTGG
GTCGACCTGTGCGGCGGAGGCGGCGGCGGCGTGGACCCGTGCCGCCGGATGGCGCAGGTG
TCCCACGTCCTCAAGGCGCTGCAGCTCCTCGCCCTCGCCTCCGTCGCCTCCTTCTCCTGG
CCGCCGCCGCTCTACTCCGTCGCCCTCCTCGCCGTCGGCCAGTACCTCAATTTCAAGGTG
TACCAGCTGCTCGGTGAGCCAGGCACCTACTACGGTGTTCGATTTGGAAAGAAAATCCCA
TGGGTGACAGAATTTCCATTTGGTTATATCAAAGACCCTCAATATGTTGGCAGCATGCTC
AGCCTTGTGGCACTGCTTTGTTGGGTTCCATTCCAATATGTTCTTCTCTGGTGCCTCGGC
TACGTTTTCATGATGTGGGTGGAAAGCAAGGAAGATCCTGCCACTCGTGCCAAGCTGCTC
TCCTGATCACTTAGCTGCTGTTGAATCTGTAGCAGGCTGTCCCTTAGCTGTTCTTCTTGG
ATGCCTCTCTGACAATGAGTGAAAGTCTGAACTTGATCGGTTGGTTCAATAAAAAGTGTG
TGCCATATTTTTGCTGCC