Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0611400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:24059319:24062693:1 gene:Os02g0611400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0611400-01)
Sequence	ATGAGAGCCCTCATCTCCCTCTCCAAGCTCACCCGCCGCCTCCTCCCCTCCCTCGCCGTC GCCCGCGCCCCACTCCCGCCCCTCCGCCGCTGCCTCCACGCGGAACCCCCACCGCCTCCT CATCACGCGCCGCCCCCCGTCGCCTCCCGGATCCTCCAGTCCGAGCTGACCCCGGGCGCG GGCGCGGACGCGGACGCGGAGCAAGAACAGCAGCCGGCCCCCGACCCCTTGCTCGACGAG TTCCTCGCGCGCTTCGTCGCCGCGCTGCGGCCGACCCTCGCCGCGGCGTTCCCCACCCAT GCCCGCCACGTGCTCGACGAGATGCTCCGCCTCGTGGCGGAGGCCGTCCTGTGCCGCCTC ACCGGGGTCGAGCCGGAGGAGGGCGGCGCCGTCGAGCTCAGCGACGACCTCTGGGCGGCG GTGTGGGAGGTCAGCGCCGCCGTGCGCGACGGGATGCAGCGGGACCGGGTCCGCGCCGAG CTCCGGGGCTACCTCCACTGCGAGGAGGTGAAGGAGATGACGCGGTTCGCGTCGGACGTC GGCATCCGCGGCGAGATGCTCCGCGAGCTCCGCTTCAAGTGGGCACGGGAGAAGCTCGAG GAGGTCGAGTTCTACCGGGGCCTCGACGACATGCGCGCCCAGGCCGAGGCGGCCGCTAAC CCTGTCGCGCTCCCGCCGCCCAGGCTCGCAGCCTTGCCGCAGAGGAAGGGGGAGATCAAG TTCAAGATACATGGGTTGGACTTGTCGGACCCAACGTGGGGTGAGGTTGTGGAGCGCGCG GCCGAGGCTGAAGCGCATTTTGTGCCACAGGAGGCCAAGCCAATAGAAGGGAAGGCGAAG AAGGCTGAGGAGAAGCTGATGGCGGTTGATCCGAGGAAAGGAGACCCGGCGCCTGCCATG GAAGAGTGGAAGGAGGAGCTGCTGCCGAAACGTGCCGACTGGATGGCGCTGCTCGAGCGT CTTAAAGCCCGCAATGTTGAGTTGTATCTCAAGGTTGCTGAAATTCTGCTGGCTGATGAA TCCTTTGGTGCAACCATTCGTGATTACTCTAAGTTAATCGATCTTCACTCTAAAGCAAAT CATGTGGAAGACGCAGAAAGGATTCTAGGTAAAATGAAAGAGAATGGTATTGCACCTGAT GTCGTCACATCCATCACTTTAGTCCACATGTATTGCAAGGTGGGGAATCTTGAACAAGCC AATCAGGCATTTCAATTCCTTAAGGGGGAAGGCTTCCCACCAGATATGAAGCTTTTCACG TCAATGATCAGAGCTCATCTTAAGTCTGGAGAACCAAAACAAGCAGAAAATTTGTTACGT GAAATGGAGAGATCGATCAAACCCACAAAGGAACTATTCATGGATGTAATCCTGGCATTT GCTCAGCGTGGCATGATAGATGGAGCCGAAAGGGTGAAAACATCGATGTTACTTGCTGGA TTCCAGCTCACGCCAGAGTTATACACATCACTTATAGAAGCATATGGACGGGGTGGTCAC GTTGGCCAAGCATATACCCTGTTTGAGCAGATGAGGAGTTCTGGACATGAACCAGATGAT CGTTGCGTTGCTGGTATGATGGTTGCCTACATGATGAAGAACCAACTGGACCACGCTCTG AGCTTCCTGTTGAAGTTAGAGAAGGATGGACTTAAACCTGGAGTTAAAACAAACCTTGTC TTGCTGGATTGGTTGTCTAGGTTGCAGCTAGTGCAGGAGGCTGAACAAGTTGTGCAGAAG ATTAGAAAGGCTGGAGAGGAACCCCTGGAAATGCATGTTTTCCTTGCTGATATGTACGCA AAGTCACAACAGGAAGAGAGAACCCGCAAATCCCTCAAGATTTTAGAGGAGAAGAAGAAA TTATTGAAGGCTTATCATTTTGAGAGGATTATAGCAGGCCTTCTCGAAGGGGGTTTCACG GAAGAAGCCAATAAATATTTCAAAATGATGAAATCCCATGGCTTTGTTCCATCACCAACA ATTGAGATTGGGGTCAAGGCTAGTTTTGGGGTTAGGGGGGGTGTTCATCCAACTGGTAGG CATCGTGGTTAA

Peptide Sequence

PEP ID	Os02t0611400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:24059319:24062693:1 gene:Os02g0611400 transcript:Os02t0611400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0611400-01)
Sequence	MRALISLSKLTRRLLPSLAVARAPLPPLRRCLHAEPPPPPHHAPPPVASRILQSELTPGA GADADAEQEQQPAPDPLLDEFLARFVAALRPTLAAAFPTHARHVLDEMLRLVAEAVLCRL TGVEPEEGGAVELSDDLWAAVWEVSAAVRDGMQRDRVRAELRGYLHCEEVKEMTRFASDV GIRGEMLRELRFKWAREKLEEVEFYRGLDDMRAQAEAAANPVALPPPRLAALPQRKGEIK FKIHGLDLSDPTWGEVVERAAEAEAHFVPQEAKPIEGKAKKAEEKLMAVDPRKGDPAPAM EEWKEELLPKRADWMALLERLKARNVELYLKVAEILLADESFGATIRDYSKLIDLHSKAN HVEDAERILGKMKENGIAPDVVTSITLVHMYCKVGNLEQANQAFQFLKGEGFPPDMKLFT SMIRAHLKSGEPKQAENLLREMERSIKPTKELFMDVILAFAQRGMIDGAERVKTSMLLAG FQLTPELYTSLIEAYGRGGHVGQAYTLFEQMRSSGHEPDDRCVAGMMVAYMMKNQLDHAL SFLLKLEKDGLKPGVKTNLVLLDWLSRLQLVQEAEQVVQKIRKAGEEPLEMHVFLADMYA KSQQEERTRKSLKILEEKKKLLKAYHFERIIAGLLEGGFTEEANKYFKMMKSHGFVPSPT IEIGVKASFGVRGGVHPTGRHRG

Transcript Sequence

Transcript ID	Os02t0611400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:24059319:24062693:1 gene:Os02g0611400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0611400-01)
Sequence	ACGCCTCACTGCCCACCGCCGCCGCCGTCACCACCGGGCGCGGCCGCCGCCACCATGAGA GCCCTCATCTCCCTCTCCAAGCTCACCCGCCGCCTCCTCCCCTCCCTCGCCGTCGCCCGC GCCCCACTCCCGCCCCTCCGCCGCTGCCTCCACGCGGAACCCCCACCGCCTCCTCATCAC GCGCCGCCCCCCGTCGCCTCCCGGATCCTCCAGTCCGAGCTGACCCCGGGCGCGGGCGCG GACGCGGACGCGGAGCAAGAACAGCAGCCGGCCCCCGACCCCTTGCTCGACGAGTTCCTC GCGCGCTTCGTCGCCGCGCTGCGGCCGACCCTCGCCGCGGCGTTCCCCACCCATGCCCGC CACGTGCTCGACGAGATGCTCCGCCTCGTGGCGGAGGCCGTCCTGTGCCGCCTCACCGGG GTCGAGCCGGAGGAGGGCGGCGCCGTCGAGCTCAGCGACGACCTCTGGGCGGCGGTGTGG GAGGTCAGCGCCGCCGTGCGCGACGGGATGCAGCGGGACCGGGTCCGCGCCGAGCTCCGG GGCTACCTCCACTGCGAGGAGGTGAAGGAGATGACGCGGTTCGCGTCGGACGTCGGCATC CGCGGCGAGATGCTCCGCGAGCTCCGCTTCAAGTGGGCACGGGAGAAGCTCGAGGAGGTC GAGTTCTACCGGGGCCTCGACGACATGCGCGCCCAGGCCGAGGCGGCCGCTAACCCTGTC GCGCTCCCGCCGCCCAGGCTCGCAGCCTTGCCGCAGAGGAAGGGGGAGATCAAGTTCAAG ATACATGGGTTGGACTTGTCGGACCCAACGTGGGGTGAGGTTGTGGAGCGCGCGGCCGAG GCTGAAGCGCATTTTGTGCCACAGGAGGCCAAGCCAATAGAAGGGAAGGCGAAGAAGGCT GAGGAGAAGCTGATGGCGGTTGATCCGAGGAAAGGAGACCCGGCGCCTGCCATGGAAGAG TGGAAGGAGGAGCTGCTGCCGAAACGTGCCGACTGGATGGCGCTGCTCGAGCGTCTTAAA GCCCGCAATGTTGAGTTGTATCTCAAGGTTGCTGAAATTCTGCTGGCTGATGAATCCTTT GGTGCAACCATTCGTGATTACTCTAAGTTAATCGATCTTCACTCTAAAGCAAATCATGTG GAAGACGCAGAAAGGATTCTAGGTAAAATGAAAGAGAATGGTATTGCACCTGATGTCGTC ACATCCATCACTTTAGTCCACATGTATTGCAAGGTGGGGAATCTTGAACAAGCCAATCAG GCATTTCAATTCCTTAAGGGGGAAGGCTTCCCACCAGATATGAAGCTTTTCACGTCAATG ATCAGAGCTCATCTTAAGTCTGGAGAACCAAAACAAGCAGAAAATTTGTTACGTGAAATG GAGAGATCGATCAAACCCACAAAGGAACTATTCATGGATGTAATCCTGGCATTTGCTCAG CGTGGCATGATAGATGGAGCCGAAAGGGTGAAAACATCGATGTTACTTGCTGGATTCCAG CTCACGCCAGAGTTATACACATCACTTATAGAAGCATATGGACGGGGTGGTCACGTTGGC CAAGCATATACCCTGTTTGAGCAGATGAGGAGTTCTGGACATGAACCAGATGATCGTTGC GTTGCTGGTATGATGGTTGCCTACATGATGAAGAACCAACTGGACCACGCTCTGAGCTTC CTGTTGAAGTTAGAGAAGGATGGACTTAAACCTGGAGTTAAAACAAACCTTGTCTTGCTG GATTGGTTGTCTAGGTTGCAGCTAGTGCAGGAGGCTGAACAAGTTGTGCAGAAGATTAGA AAGGCTGGAGAGGAACCCCTGGAAATGCATGTTTTCCTTGCTGATATGTACGCAAAGTCA CAACAGGAAGAGAGAACCCGCAAATCCCTCAAGATTTTAGAGGAGAAGAAGAAATTATTG AAGGCTTATCATTTTGAGAGGATTATAGCAGGCCTTCTCGAAGGGGGTTTCACGGAAGAA GCCAATAAATATTTCAAAATGATGAAATCCCATGGCTTTGTTCCATCACCAACAATTGAG ATTGGGGTCAAGGCTAGTTTTGGGGTTAGGGGGGGTGTTCATCCAACTGGTAGGCATCGT GGTTAAGGCTTTGTCCGTTGGCAGTGATCAGCTGCCATTCAGGCACTGATTCTGGTTTGA AAATCTTGAAGTAGCACTGACGACGCCATAGCCAATTCTGTCAACTGAAGCGGCAAAAAA AATTTCCGGCTTCAATTGGTTTTGTTTGATCTGATATCAGATGTCTTCATTTTGAAGATG CCTCCATGAACTATGGATTCATACAAGTAGATGGCCGCTTGTCCTGTTATTGCCGGGATT TTTTTTCCTCATCAATTGTACTTGCATGCTCACACTTAATAAGTCTTTTAGTCACTGTAA CGCCTGGATATCTAGGTTGTGCTTGTGCCAACAATCGGATTTATCTTAGCAAATATCAGT TATGACTTACCTGTCATAGGCATTTGTCACCAAATAAATGTTTACATTTTAATGAACAAT GAAATTATATCACACTGTCAAATTGGTGC