Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0608400-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:23868295:23874848:-1 gene:Os02g0608400 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os02t0608400-01);Similar to Ca2+ binding protein cbp1. (Os02t0608400-02)
Sequence	ATGGCTTCAAGGGCGGTCATCAGAAGAAGGAAGTATCTTTTGGATCATGTTAACGCACCT ACCCTCTCATTGTCCCCCTTCTCTACCTTCCAACATGGAAGATCTGGTTCTGAGGATGAA TCAAGAATCGGACAGCGATTTCTTGAGCAAAGCTCTGGGGATTCCAAATGGGAGCAAGGG CAGTATGGTGTGAAATTGATAAAGGGAGATCTACTAGCCCTTGGTAATGGGCTTCTGCGG CGCCCAGCCCATGGGATTTCTCTACCTGCTTATGGAATTGGAAGGAAGGAATTTGGGTTG CCTATGGGTGCTAGACATTTGCTGCAGTCAGTCCGCACAGCCTCAACTGCAACAGCTGGG CAACCTAAGTTGGATATTGAAGATGAACAGAGTGAGGATCAGAAACAGAACAAAAGGAAA AAGGAGGCATCCCCAGAAGAATGTGATCAGGCTGTGGAAGGCCTAAGCAGTGCAAAAGCT AAAGCCAAAGCTAAGCAGGTACAAGAATCTGTAAAGGCTGGCCAATCAATTGTACGAAAA TTCTGGGCGAGGCTTCTGGGTATTGGTCCTGCTCTCCGAGCTGTTGCTTCGATGAGCAGA GCTGATTGGGCTGCAAAGCTGAAGCACTGGAAGGATGAATTTGTGTCAACGCTGCAGCAT TACTGGTTAGGGACAAAGCTACTCTGGGCAGATGTGAGGATTTCGTCAAGATTACTGGTG AAACTTGCTGGTGGAAAGAACCTTTCAAGAAGAGAGAGACAACAACTGACCCGTACAACA GCAGATATCTTCAGGCTGGTACCTTTTGCTGTGTTCATCATTGTTCCATTCATGGAGTTC TTACTTCCAGTGTTCCTCAAGTTATTTCCAAATATGCTTCCCTCAACTTTCCAAGACAAG ATGAAAGAAGAGGAAGCGTTGAAAAGGAAACTGAAAGCAAGAATGGAGTATGCCAAGTTT TTGCAAGATACTGCAAAAGAAATGGCAAAGGAAGTTCAAACATCACGTAGTGGAGAAATA AAACAAACAGCCGAAGATCTTGATGAATTTTTGAACAAGGTTAGGAGAGGTGAACATGTC TCAAATGATGAAATCTTGAACTTCGCGAAGCTGTTTAATGATGAGCTGACTTTGGATAAC ATGAGCAGACCACGCTTGGTAAACATGTGCAAATATATGGGTATTCGACCTTTCGGTACT GACCACTACTTGAGGTTCATGCTTCGCAAAAAACTGCAAGACATTAAGAATGACGATAAG ATGATTCAAGCTGAGGGTGTTGAGTCTCTCTCTGAAGAGGAACTTCGGCAAGCCTGTCGT GAACGTGGTCACCTAGGTTTGCTGTCAACAGAAGAAATGCGCCAACAGCTCCGAGATTGG TTGGATCTCTCACTTAATCATGCTGTGCCATCCTCTCTTCTCATACTTTCAAGAGCTTTT ACCGTATCTGGGAAAATGAAGCCTGAGGAGGCTGTTGTAGCAACCTTATCTTCTCTACCA GATGAAGTTGTGGATACAGTTGGGACCGTATTGCCATCTGAAGATTCGGTTTCTGAGAGG AGGAGAAAACTGGAATTCCTTGAGATGCAGGAAGAACTTATCAAGGAGGAAGAGAAGAAG AAAGAGAAAGAAGAAAAAGCGAAACAAGAGAAAGAAGAAAAGGCCAAACTCAAAGAACCA AAGGCTGCTGAAGAAGATTTGGCTTTGAAGGAAATGACTGGTCCTACTGCTAGGGAAGAA GAAGAACTGAGAGAAGCAAAACAGCACGATAAGGAAAAGCTCTGTAATTTTAGTCGAGCA CTGGCTGTACTGGCATCCGCATCGTCTGTTAGCAAGGAGCGTCAAGAGTTCCTCAGCCTT GTCAACAAAGAGATTGAACTGTATAACTCTATGCTTGAAAAGGAGGGTACAGAAGGTGAA GAGGAAGCTAAGAAAGCTTACATGGCTGCTAGAGAAGAGTCGGACAAGGCTGCTGAGGTT GATGAAGAAGAAAAGGTCTCATCGGCGCTGATTG

Peptide Sequence

PEP ID	Os02t0608400-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:23868295:23874848:-1 gene:Os02g0608400 transcript:Os02t0608400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os02t0608400-01);Similar to Ca2+ binding protein cbp1. (Os02t0608400-02)
Sequence	MASRAVIRRRKYLLDHVNAPTLSLSPFSTFQHGRSGSEDESRIGQRFLEQSSGDSKWEQG QYGVKLIKGDLLALGNGLLRRPAHGISLPAYGIGRKEFGLPMGARHLLQSVRTASTATAG QPKLDIEDEQSEDQKQNKRKKEASPEECDQAVEGLSSAKAKAKAKQVQESVKAGQSIVRK FWARLLGIGPALRAVASMSRADWAAKLKHWKDEFVSTLQHYWLGTKLLWADVRISSRLLV KLAGGKNLSRRERQQLTRTTADIFRLVPFAVFIIVPFMEFLLPVFLKLFPNMLPSTFQDK MKEEEALKRKLKARMEYAKFLQDTAKEMAKEVQTSRSGEIKQTAEDLDEFLNKVRRGEHV SNDEILNFAKLFNDELTLDNMSRPRLVNMCKYMGIRPFGTDHYLRFMLRKKLQDIKNDDK MIQAEGVESLSEEELRQACRERGHLGLLSTEEMRQQLRDWLDLSLNHAVPSSLLILSRAF TVSGKMKPEEAVVATLSSLPDEVVDTVGTVLPSEDSVSERRRKLEFLEMQEELIKEEEKK KEKEEKAKQEKEEKAKLKEPKAAEEDLALKEMTGPTAREEEELREAKQHDKEKLCNFSRA LAVLASASSVSKERQEFLSLVNKEIELYNSMLEKEGTEGEEEAKKAYMAAREESDKAAEV DEEEKVSSALI

Transcript Sequence

Transcript ID	Os02t0608400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:23868295:23874848:-1 gene:Os02g0608400 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os02t0608400-01);Similar to Ca2+ binding protein cbp1. (Os02t0608400-02)
Sequence	CCCTCCTCTTCTCTCTCTCCTCCTCCTCTCTCCAAAACCCTAACCCCTCCTCGATCCAAG CAGCTCGACGGGCTCGGCGGCGCGCCTCTCGCCCGGCGGTGAGCCGATTCACTCTCCACC CCCGCTTTACCTCGAGACGATCCCTGGGCGTGTTTTTCTTTGATTTCTTTCCCCTGGGTT TCTCTGCTGGGGGATTCGCGTTTGAGCCGCGAGTAGGTCGTTGGGTGGAGTGGATCGGGA GCCGGGGTCTTTGTCCGAAAAAGGCATGACCTTGGCCTTCTAATTGGAAAGGTGTGAAGC AATTAAGTATGGCTTCAAGGGCGGTCATCAGAAGAAGGAAGTATCTTTTGGATCATGTTA ACGCACCTACCCTCTCATTGTCCCCCTTCTCTACCTTCCAACATGGAAGATCTGGTTCTG AGGATGAATCAAGAATCGGACAGCGATTTCTTGAGCAAAGCTCTGGGGATTCCAAATGGG AGCAAGGGCAGTATGGTGTGAAATTGATAAAGGGAGATCTACTAGCCCTTGGTAATGGGC TTCTGCGGCGCCCAGCCCATGGGATTTCTCTACCTGCTTATGGAATTGGAAGGAAGGAAT TTGGGTTGCCTATGGGTGCTAGACATTTGCTGCAGTCAGTCCGCACAGCCTCAACTGCAA CAGCTGGGCAACCTAAGTTGGATATTGAAGATGAACAGAGTGAGGATCAGAAACAGAACA AAAGGAAAAAGGAGGCATCCCCAGAAGAATGTGATCAGGCTGTGGAAGGCCTAAGCAGTG CAAAAGCTAAAGCCAAAGCTAAGCAGGTACAAGAATCTGTAAAGGCTGGCCAATCAATTG TACGAAAATTCTGGGCGAGGCTTCTGGGTATTGGTCCTGCTCTCCGAGCTGTTGCTTCGA TGAGCAGAGCTGATTGGGCTGCAAAGCTGAAGCACTGGAAGGATGAATTTGTGTCAACGC TGCAGCATTACTGGTTAGGGACAAAGCTACTCTGGGCAGATGTGAGGATTTCGTCAAGAT TACTGGTGAAACTTGCTGGTGGAAAGAACCTTTCAAGAAGAGAGAGACAACAACTGACCC GTACAACAGCAGATATCTTCAGGCTGGTACCTTTTGCTGTGTTCATCATTGTTCCATTCA TGGAGTTCTTACTTCCAGTGTTCCTCAAGTTATTTCCAAATATGCTTCCCTCAACTTTCC AAGACAAGATGAAAGAAGAGGAAGCGTTGAAAAGGAAACTGAAAGCAAGAATGGAGTATG CCAAGTTTTTGCAAGATACTGCAAAAGAAATGGCAAAGGAAGTTCAAACATCACGTAGTG GAGAAATAAAACAAACAGCCGAAGATCTTGATGAATTTTTGAACAAGGTTAGGAGAGGTG AACATGTCTCAAATGATGAAATCTTGAACTTCGCGAAGCTGTTTAATGATGAGCTGACTT TGGATAACATGAGCAGACCACGCTTGGTAAACATGTGCAAATATATGGGTATTCGACCTT TCGGTACTGACCACTACTTGAGGTTCATGCTTCGCAAAAAACTGCAAGACATTAAGAATG ACGATAAGATGATTCAAGCTGAGGGTGTTGAGTCTCTCTCTGAAGAGGAACTTCGGCAAG CCTGTCGTGAACGTGGTCACCTAGGTTTGCTGTCAACAGAAGAAATGCGCCAACAGCTCC GAGATTGGTTGGATCTCTCACTTAATCATGCTGTGCCATCCTCTCTTCTCATACTTTCAA GAGCTTTTACCGTATCTGGGAAAATGAAGCCTGAGGAGGCTGTTGTAGCAACCTTATCTT CTCTACCAGATGAAGTTGTGGATACAGTTGGGACCGTATTGCCATCTGAAGATTCGGTTT CTGAGAGGAGGAGAAAACTGGAATTCCTTGAGATGCAGGAAGAACTTATCAAGGAGGAAG AGAAGAAGAAAGAGAAAGAAGAAAAAGCGAAACAAGAGAAAGAAGAAAAGGCCAAACTCA AAGAACCAAAGGCTGCTGAAGAAGATTTGGCTTTGAAGGAAATGACTGGTCCTACTGCTA GGGAAGAAGAAGAACTGAGAGAAGCAAAACAGCACGATAAGGAAAAGCTCTGTAATTTTA GTCGAGCACTGGCTGTACTGGCATCCGCATCGTCTGTTAGCAAGGAGCGTCAAGAGTTCC TCAGCCTTGTCAACAAAGAGATTGAACTGTATAACTCTATGCTTGAAAAGGAGGGTACAG AAGGTGAAGAGGAAGCTAAGAAAGCTTACATGGCTGCTAGAGAAGAGTCGGACAAGGCTG CTGAGGTTGATGAAGAAGAAAAGGTCTCATCGGCGCTGATTG