Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0607700-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:23829191:23834725:-1 gene:Os02g0607700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os02t0607700-01)
Sequence

ATGGACTTGTCGAGCTCCAAGGAGGCGACGCCTCCTCCCGAGGCGTGGTGGACGGGGGAG
ACGGTGGCGGTGGTGACGGGGGCGAACCGCGGGATCGGGCACGCGCTGGCGGCGCGGCTG
GCGGAGCAAGGGCTGGCCGTGGTGCTGACGGCGCGGGACGGGGCGCGCGGGGAGGCGGCC
GCGGCGGCGCTCCGCGCGAGGGGCCTCCGCTCCGTCCGGTTCCGCCGCCTCGACGTCTCC
GATCCGGCCTCCGTCGCCGCCTTCGCCTCCTGGCTCCGCGACGAACTCGGCGGCCTCGAC
ATCCTGGTGAACAACGCTGCCGTTTCGTTCAACGAGATCGACACCAATTCGGTGGAGCAC
GCTGAGACGGTGCTCAGGACCAACTTCTACGGGGCCAAGATGCTCATCGAGGCGCTCCTG
CCGCTTTTCCGGCGATCGGCTGCCAACAGCAGGATCCTGAACATCAGCTCCCAGCTTGGC
CTCCTAAATAAGGTGAGGGACCCGTCGCTGCGGAGCATGCTGCTGGACGAGGCGTCGCTG
ACGGAGGGGAAGATCGAGCGGATGGCGTCGCGGTTCCTGGCCGAGGTGAAGGACGGGACG
TGGTCGGCGCCGGGGCGCGGGTGGCCGGCGGTGTGGACGGACTACGCGGTGTCCAAGCTC
GCGCTCAACGCCTACTCGCGCGTCCTCGCCGCCCGCCTCGCCCGAGGCGGCGACCGCGTC
GCCGTCAACTGCTTCTGCCCCGGGTTCACGCGCACCGACATGACCCGCGGCTGGGGCACC
CGCACCGCCGAGGAGGCCGGCCGCGTCGCCGCCGGCCTCGCGCTGCTCCCGCCCGGCGAC
CTCCCCACCGGCAAGTTCTTCAAGTGGTGCACGCCCCAGCTCTACTCCAAGCTGTGA

Peptide Sequence

PEP ID

Os02t0607700-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:23829191:23834725:-1 gene:Os02g0607700 transcript:Os02t0607700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os02t0607700-01)
Sequence

MDLSSSKEATPPPEAWWTGETVAVVTGANRGIGHALAARLAEQGLAVVLTARDGARGEAA
AAALRARGLRSVRFRRLDVSDPASVAAFASWLRDELGGLDILVNNAAVSFNEIDTNSVEH
AETVLRTNFYGAKMLIEALLPLFRRSAANSRILNISSQLGLLNKVRDPSLRSMLLDEASL
TEGKIERMASRFLAEVKDGTWSAPGRGWPAVWTDYAVSKLALNAYSRVLAARLARGGDRV
AVNCFCPGFTRTDMTRGWGTRTAEEAGRVAAGLALLPPGDLPTGKFFKWCTPQLYSKL

Transcript Sequence

Transcript ID

Os02t0607700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:23829191:23834725:-1 gene:Os02g0607700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os02t0607700-01)
Sequence

GTCCCCCTCGCTCTCACCCCCACTCCCACTCCCAAGCGCCAAGCACCTCTCCGCCATTGA
TGGACTTGTCGAGCTCCAAGGAGGCGACGCCTCCTCCCGAGGCGTGGTGGACGGGGGAGA
CGGTGGCGGTGGTGACGGGGGCGAACCGCGGGATCGGGCACGCGCTGGCGGCGCGGCTGG
CGGAGCAAGGGCTGGCCGTGGTGCTGACGGCGCGGGACGGGGCGCGCGGGGAGGCGGCCG
CGGCGGCGCTCCGCGCGAGGGGCCTCCGCTCCGTCCGGTTCCGCCGCCTCGACGTCTCCG
ATCCGGCCTCCGTCGCCGCCTTCGCCTCCTGGCTCCGCGACGAACTCGGCGGCCTCGACA
TCCTGGTGAACAACGCTGCCGTTTCGTTCAACGAGATCGACACCAATTCGGTGGAGCACG
CTGAGACGGTGCTCAGGACCAACTTCTACGGGGCCAAGATGCTCATCGAGGCGCTCCTGC
CGCTTTTCCGGCGATCGGCTGCCAACAGCAGGATCCTGAACATCAGCTCCCAGCTTGGCC
TCCTAAATAAGGTGAGGGACCCGTCGCTGCGGAGCATGCTGCTGGACGAGGCGTCGCTGA
CGGAGGGGAAGATCGAGCGGATGGCGTCGCGGTTCCTGGCCGAGGTGAAGGACGGGACGT
GGTCGGCGCCGGGGCGCGGGTGGCCGGCGGTGTGGACGGACTACGCGGTGTCCAAGCTCG
CGCTCAACGCCTACTCGCGCGTCCTCGCCGCCCGCCTCGCCCGAGGCGGCGACCGCGTCG
CCGTCAACTGCTTCTGCCCCGGGTTCACGCGCACCGACATGACCCGCGGCTGGGGCACCC
GCACCGCCGAGGAGGCCGGCCGCGTCGCCGCCGGCCTCGCGCTGCTCCCGCCCGGCGACC
TCCCCACCGGCAAGTTCTTCAAGTGGTGCACGCCCCAGCTCTACTCCAAGCTGTGAAACT
GTCAGCGACATGCTAGGCTCCTGAGCTCCTCATGGTAATATGAGAGAAAACTACTGCAAA
TTTAGAGAGGAAAATTAAGCATGAGTTGCTTAAGCATCAACCCTGTCAGTTGACAGTGAA
AATATATAGTACCACTATATGGCAGTATGCGTCTTTGGTGTTT