Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0606800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:23773136:23775628:1 gene:Os02g0606800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NICOTINAMIDASE description:Isochorismatase hydrolase family protein. (Os02t0606800-01)
Sequence

ATGGGTTCCGACGCCAGCAGCGCCGCCGACGCGATGGGAGTGCTCCGGGCGGCGGTGCCC
CTGCAGGCGGACGCCGACCTCGTCCTGGCTACCGGCGGCGGCGGCGAGCGGGGGCAGGTG
GTGGGGCTCGTCCTCGTCGACGTCTCCAACGGGTTCTGCACCGTCGGCGCCGGGAACCTC
GCCCCCGTCACGCCAAACAAACAGATAGAGAAGATGGTGGATGAGGCCGCTAGGCTCGCC
AAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACACCCACTACCCTGAT
AAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCGAGGAAAATTTTGTC
CCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGAGGAAGGATTGTATT
GATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTTCAGATTGGGTTGCG
AAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACTTTTGTGTTTTGGAT
TTTGCAAGTTCAGCTTTGGCTGCCAGGAACATTGGCCGAGTGCCTCCGCTGGAAGATGTT
GTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAGTAGCCAGGAGTATG
CAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGACTTTACATGGCAAAA
AGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAA

Peptide Sequence

PEP ID

Os02t0606800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:23773136:23775628:1 gene:Os02g0606800 transcript:Os02t0606800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NICOTINAMIDASE description:Isochorismatase hydrolase family protein. (Os02t0606800-01)
Sequence

MGSDASSAADAMGVLRAAVPLQADADLVLATGGGGERGQVVGLVLVDVSNGFCTVGAGNL
APVTPNKQIEKMVDEAARLAKVFCERNWPVFAFLDTHYPDKPEPPFPPHCIIGSGEENFV
PALEWLEKDPNVTIRRKDCIDGYLGAFEKDGSNVFSDWVAKFQIKTVLVLGICTDFCVLD
FASSALAARNIGRVPPLEDVVIYSEGCATYNLPVEVARSMQGTLAHPQDLMHHMGLYMAK
SRGAKVVDRIII

Transcript Sequence

Transcript ID

Os02t0606800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:23773136:23775628:1 gene:Os02g0606800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NICOTINAMIDASE description:Isochorismatase hydrolase family protein. (Os02t0606800-01)
Sequence

GCGACGGGGCGAGACACCGGCGGCCATAGCTCGAGAGCTCGAGGTCAACCCGAAAGCCAC
GCACGCGCCGCGCAATGGGTTCCGACGCCAGCAGCGCCGCCGACGCGATGGGAGTGCTCC
GGGCGGCGGTGCCCCTGCAGGCGGACGCCGACCTCGTCCTGGCTACCGGCGGCGGCGGCG
AGCGGGGGCAGGTGGTGGGGCTCGTCCTCGTCGACGTCTCCAACGGGTTCTGCACCGTCG
GCGCCGGGAACCTCGCCCCCGTCACGCCAAACAAACAGATAGAGAAGATGGTGGATGAGG
CCGCTAGGCTCGCCAAGGTGTTCTGCGAGAGGAACTGGCCAGTCTTTGCGTTTCTTGACA
CCCACTACCCTGATAAGCCCGAGCCGCCTTTCCCGCCACACTGTATAATTGGTTCTGGCG
AGGAAAATTTTGTCCCAGCTCTGGAGTGGCTGGAAAAGGATCCAAATGTAACGATCAGGA
GGAAGGATTGTATTGATGGTTATCTTGGTGCATTTGAGAAAGATGGCTCAAATGTTTTTT
CAGATTGGGTTGCGAAGTTTCAGATCAAAACCGTATTGGTTTTAGGAATATGCACAGACT
TTTGTGTTTTGGATTTTGCAAGTTCAGCTTTGGCTGCCAGGAACATTGGCCGAGTGCCTC
CGCTGGAAGATGTTGTCATTTATTCAGAGGGTTGTGCTACGTATAACCTCCCAGTTGAAG
TAGCCAGGAGTATGCAAGGAACCTTGGCTCATCCTCAGGATCTAATGCACCACATGGGAC
TTTACATGGCAAAAAGCAGGGGTGCAAAGGTTGTTGACAGAATCATTATTTAAGATTAGA
GGTGTAAAACTAACACAAGACTGTAATAGTGACCTGGATCGATTATCTAGTTTGGTTTTT
ATTGCTGGGACGATGATCCTAGTGTTCTCTTTACTTCTTCCTTTTATCTCTTCAATGTAC
AACAATCTGACATATATTTCTTTACTTCTTCCTTTTATCTCTTCAATGTACAACAATCTG
ATATATATTTGCGGTTGGACAGAATACTGATATTTTGCTAATGTTTCGTGC