Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0605900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:23743045:23744109:-1 gene:Os02g0605900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHITINASE 6 description:Similar to Chitinase (EC 3.2.1.14) A. (Os02t0605900-01)
Sequence

ATGGCGCGAAGGCTCTCGCTGCTGGCCGTCGTGCTGGCGATGGTGGCGGCCGTGTCGGCG
AGCACGGCGGCGGCGCAGAGCTGCGGGTGCGCGTCGGACCAGTGCTGCAGCAAGTGGGGG
TTCTGCGGCACCGGCAGCGACTACTGCGGCACGGGGTGCCAGGCGGGCCCCTGCGACGTG
CCGGCCACCAACGACGTGTCCGTGGCGAGCATCGTCACGCCGGAGTTCTTCGCGGCGCTC
GTCGCCCAGGCCGACGACGGCTGCGCCGCCAAGGGCTTCTACACCCGCGACGCCTTCCTC
ACCGCCGCCGGTGGCTACCCTTCCTTCGGCCGCACCGGCTCCGTCGACGACTCCAAGCGC
GAGATCGCCGCCTTCTTCGCCCACGCCAACCACGAGACCATAAAGTTCTGCTACATCGAG
GAGATCGACGGACCGAGCAAGAACTACTGCGACGAGACGAGCACGCAGTGGCCGTGCATG
GCGGGGAAGGGGTACTACGGGCGCGGGCCGCTGCAGATCTCGTGGAACTTCAACTACGGG
CCGGCGGGGCAGAGCATCGGGTTCGACGGGCTGGGCGACCCGGACGCGGTGGCGAGGAGC
CCCGTGCTGGCGTTCCAGACGGCGCTCTGGTACTGGACCAACAACGTGCACGACGCCTTC
GTCTCCGGCCAGGGGTTCGGCGCCACCATCCGCGCCATCAACGGCGCGCTCGAGTGCGAC
GGCAAGAACCCCACCGCCGTCAGCAACCGCGTCGCCTACTACCAGCAGTTCTGCCAGCAG
TTCGGCGTCGACCCCGGCAGCAACCTCACCTGCTAA

Peptide Sequence

PEP ID

Os02t0605900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:23743045:23744109:-1 gene:Os02g0605900 transcript:Os02t0605900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHITINASE 6 description:Similar to Chitinase (EC 3.2.1.14) A. (Os02t0605900-01)
Sequence

MARRLSLLAVVLAMVAAVSASTAAAQSCGCASDQCCSKWGFCGTGSDYCGTGCQAGPCDV
PATNDVSVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKR
EIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYG
PAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECD
GKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC

Transcript Sequence

Transcript ID

Os02t0605900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:23743045:23744109:-1 gene:Os02g0605900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHITINASE 6 description:Similar to Chitinase (EC 3.2.1.14) A. (Os02t0605900-01)
Sequence

ATCACAATTAAAGTCACAGCATAGTAACCAACCGAACCAATCATCAGCCATGGCGCGAAG
GCTCTCGCTGCTGGCCGTCGTGCTGGCGATGGTGGCGGCCGTGTCGGCGAGCACGGCGGC
GGCGCAGAGCTGCGGGTGCGCGTCGGACCAGTGCTGCAGCAAGTGGGGGTTCTGCGGCAC
CGGCAGCGACTACTGCGGCACGGGGTGCCAGGCGGGCCCCTGCGACGTGCCGGCCACCAA
CGACGTGTCCGTGGCGAGCATCGTCACGCCGGAGTTCTTCGCGGCGCTCGTCGCCCAGGC
CGACGACGGCTGCGCCGCCAAGGGCTTCTACACCCGCGACGCCTTCCTCACCGCCGCCGG
TGGCTACCCTTCCTTCGGCCGCACCGGCTCCGTCGACGACTCCAAGCGCGAGATCGCCGC
CTTCTTCGCCCACGCCAACCACGAGACCATAAAGTTCTGCTACATCGAGGAGATCGACGG
ACCGAGCAAGAACTACTGCGACGAGACGAGCACGCAGTGGCCGTGCATGGCGGGGAAGGG
GTACTACGGGCGCGGGCCGCTGCAGATCTCGTGGAACTTCAACTACGGGCCGGCGGGGCA
GAGCATCGGGTTCGACGGGCTGGGCGACCCGGACGCGGTGGCGAGGAGCCCCGTGCTGGC
GTTCCAGACGGCGCTCTGGTACTGGACCAACAACGTGCACGACGCCTTCGTCTCCGGCCA
GGGGTTCGGCGCCACCATCCGCGCCATCAACGGCGCGCTCGAGTGCGACGGCAAGAACCC
CACCGCCGTCAGCAACCGCGTCGCCTACTACCAGCAGTTCTGCCAGCAGTTCGGCGTCGA
CCCCGGCAGCAACCTCACCTGCTAATTACAGGGATTGACATATGCTATGTATGTGATTTT
GTACGAATAATAATTGTCATAAGTAATCAAATAAAATCGTATTGCATTACGTCAACGTTG
TTTGCGGCATAGGAGT