Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0601800-03
CDS Infomation	cds chromosome:IRGSP-1.0:2:23549175:23554380:-1 gene:Os02g0601800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bromodomain containing protein. (Os02t0601800-01);Similar to Kinase-like protein. (Os02t0601800-02);Bromodomain containing protein. (Os02t0601800-03);Similar to Kinase-like protein. (Os02t0601800-04)
Sequence	ATGACACCGACGGTCCTCATGGAGTTTGGGCAGCAGAGGCAGATTAAGCGGGGCTACGAT GAAATGGCGTTCCGGGGCATGGCGTCAGCGGCGCCACGGGGTTACGCGGAGACCGTTGGC GAGTCGGAGGGCGCGGCAGGCAGCCCCGTTCGTGTTGACTCCGAGGACTCTTCGGCCCCC AAGCGCAAGTGCATCAGCCTAAACAGCGACGGCTTCGATGTCAAGCGGGAGATTTTCGTC CCAGCCAAGATGTCCTCCTCCGAGAGGAGGCATCTCCGGAAGAGGTTCCGCACAGAGCTT GATTCGGTCCGGAATCTCCTCAAGAAGCCGGAGTTTGCTGTCCCTGTCCCTGTCAATAGA GCTCCCGCGCTCTCGTCCTCGGCTGCCCCTCGAGGTAAGAAGGGACAGCGTGGTAACCAT GTGGTCCGTGGTGCCAAGGGGCGTTTCTTGCCTACAAAGCCCCGACCTGAGGCTTCCACG GTGTTGACTGAGGATGCGATTTTTAAGCAATGCGATGCTATTCTGAAAAAGCTGATGACT CAGAAATGTAGTAACATATTCGACTCCCCGGTTGATGCTGTTAAGCTGAATATTCCAGAT TATTTTCAAATCATCAAGAAACCGATGGATCTTGGAACTATCAGGAATAAGCTTGACTCT GGTTCCTACACGAGTCCATCTGAATTTGCAGCCGATGTACGGCTGACCTTTTCAAATGCG ATGACTTACAATCCTCGTGGGCATGTAGTGCATGATTATGCCATTCAACTAAACAAGATG TTTGAATCAAGATGGAGGACAATTGAAAAGAAGCTGGCTTCCATTGCCACAGAGGCGCAC GTCGAGGTTGACAGGGCTGACTCAAAGAGGAGGAAGACTCCCCCTGTGGACTGCAGTGAG GTGTCAACAGAGTGTGTGAGGCCAACAGAGTCTGTTAGACCAACAGAGTCTGTAAAGCCA AAAATGACATTCGAGGAGAAAGAATCATTTGGGAACTGTTTGGCATCTTTGTCTGAGGAT CCGGAGGTACCTTCACACATCATTGATTTGTTGCAGCAATGCATTGACAACAACACAGAT CAGCTTGGTGATGGAGAGATAGAGATTGATATCCATGCTGTCAGTGATGACCTACTATTC GAGTTGAAGAAACATGTTGACAAGTATTTGCAAGAGAGAGAGCAGAGCCAGCAGGCAAAA TCTGAGCCTTCTGAGAATGAGGCTGCTAATGTATCTGGCCTTAGCCACTCCTCTACAAAT CCCTGCAAAGGTGGTGATCCAGTTGAGGAGGATGTAGATATTTGCGGGAATGCATCCCCT ATATTGATAGAAAAAGATGCACACAACAATCCTAACAAGTGTGGTAGCCCAAGTAGTTCC AGCAGTGACTCTGGATCTTCTTCCAGCGATTCTGAGTCGGGCAGTGACAGTGAAAGCGAA CAAGAAAAAGGTGGTAGCCCAGGAAAGCCGAAGGGAAGTAAGAGATCTGAACAACTGGTG GAGCAAGAAAAGAGTGATGTTATAAGTCCAGTCGATGCCATCCGTCCTGCTGATGATGTG GAGCTCCGTGAGCAGGATAACGAGTCAAAGCCTGCCCCAGAGGGGGAGAATTCAAAACCC GACAGGCAAGTCTCCCCAGACAAGCTCTTAAGAGCAGCCCTCCTTAGGAGTCGTTATGCT GATGTGATTGTTAAGGCACAGGGGATTCTCAGCCAGGGTGGAGACAAACAGGAGGAGCTG GAAAAGCTCCAGAAGGAAGAGAAAGCAAGGCTGTTGGCTGAAGGAAATGCAGCTATGGAA GCTCGAAGAGCTGAAGCTGAAGCTGAAGCCAAGCGTAAACGGGACCTTGAGAGGGAGAAA GCTCGCCAGGCCCTGCAGGAGATGGAGAGAACGGTGGAAATCAATGACAACCTCCATCTA AAGGATTTGGAAATGCTTGGAACGGCAACCACAGAACATATTGTGAGTTCTGTTGATGAG ACTAGTCCTGAGCATTCCCAGGATGGCATGCCCAGTTTTCTTCCTGGATCAGGCAATCCA TTGGAACAGCTGGGACTCTTCATGAAAGCAGATGAGGAGGAAGAGGAAGAAGATCCTAGC AGTGTCCCCAGCACTAAAGATGCAGAGGAAGGAGAGATCAACTAG

Peptide Sequence

PEP ID	Os02t0601800-03
PEP Infomation	pep chromosome:IRGSP-1.0:2:23549175:23554380:-1 gene:Os02g0601800 transcript:Os02t0601800-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bromodomain containing protein. (Os02t0601800-01);Similar to Kinase-like protein. (Os02t0601800-02);Bromodomain containing protein. (Os02t0601800-03);Similar to Kinase-like protein. (Os02t0601800-04)
Sequence	MTPTVLMEFGQQRQIKRGYDEMAFRGMASAAPRGYAETVGESEGAAGSPVRVDSEDSSAP KRKCISLNSDGFDVKREIFVPAKMSSSERRHLRKRFRTELDSVRNLLKKPEFAVPVPVNR APALSSSAAPRGKKGQRGNHVVRGAKGRFLPTKPRPEASTVLTEDAIFKQCDAILKKLMT QKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNA MTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLASIATEAHVEVDRADSKRRKTPPVDCSE VSTECVRPTESVRPTESVKPKMTFEEKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTD QLGDGEIEIDIHAVSDDLLFELKKHVDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTN PCKGGDPVEEDVDICGNASPILIEKDAHNNPNKCGSPSSSSSDSGSSSSDSESGSDSESE QEKGGSPGKPKGSKRSEQLVEQEKSDVISPVDAIRPADDVELREQDNESKPAPEGENSKP DRQVSPDKLLRAALLRSRYADVIVKAQGILSQGGDKQEELEKLQKEEKARLLAEGNAAME ARRAEAEAEAKRKRDLEREKARQALQEMERTVEINDNLHLKDLEMLGTATTEHIVSSVDE TSPEHSQDGMPSFLPGSGNPLEQLGLFMKADEEEEEEDPSSVPSTKDAEEGEIN

Transcript Sequence

Transcript ID	Os02t0601800-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:23549175:23554380:-1 gene:Os02g0601800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bromodomain containing protein. (Os02t0601800-01);Similar to Kinase-like protein. (Os02t0601800-02);Bromodomain containing protein. (Os02t0601800-03);Similar to Kinase-like protein. (Os02t0601800-04)
Sequence	GCGCGTCACAGTCTCGCATCGCTTCGCTTCCCAGTTTCGGGTCTCTCGCTTCCCCCGCGC GGATCTCCACTTCGGCTCTCCCCGGCTCGGCTCGGCTCCCTCCACCTCGGCTCGGCTCAA GTCGAGTCGCTTCGCGAAGGAAAAGGATAAGCAGGAGACGGCTCGACTCGAGAGGAGGAA AAAGAAAAGAGAAGAAAAAAGAGAAAAAAAAAAGAGGATAAGGCGGGGAGGCGTCTCGAG CCGGCGGCCACCTCGCGACCCTCAGATCCGCCCGTCTCCGGAGCAGATCCGGCTCGCCGG CGGCCGCACGGGAGGAGGAGGCCGCCGTCCGCCGCGGATCCCCGGCCTAGGGTTTCGCCC TCTTCAGATCCGGCTTCTTCAGATCTGGCGCCCGGGCACATGACACCGACGGTCCTCATG GAGTTTGGGCAGCAGAGGCAGATTAAGCGGGGCTACGATGAAATGGCGTTCCGGGGCATG GCGTCAGCGGCGCCACGGGGTTACGCGGAGACCGTTGGCGAGTCGGAGGGCGCGGCAGGC AGCCCCGTTCGTGTTGACTCCGAGGACTCTTCGGCCCCCAAGCGCAAGTGCATCAGCCTA AACAGCGACGGCTTCGATGTCAAGCGGGAGATTTTCGTCCCAGCCAAGATGTCCTCCTCC GAGAGGAGGCATCTCCGGAAGAGGTTCCGCACAGAGCTTGATTCGGTCCGGAATCTCCTC AAGAAGCCGGAGTTTGCTGTCCCTGTCCCTGTCAATAGAGCTCCCGCGCTCTCGTCCTCG GCTGCCCCTCGAGGTAAGAAGGGACAGCGTGGTAACCATGTGGTCCGTGGTGCCAAGGGG CGTTTCTTGCCTACAAAGCCCCGACCTGAGGCTTCCACGGTGTTGACTGAGGATGCGATT TTTAAGCAATGCGATGCTATTCTGAAAAAGCTGATGACTCAGAAATGTAGTAACATATTC GACTCCCCGGTTGATGCTGTTAAGCTGAATATTCCAGATTATTTTCAAATCATCAAGAAA CCGATGGATCTTGGAACTATCAGGAATAAGCTTGACTCTGGTTCCTACACGAGTCCATCT GAATTTGCAGCCGATGTACGGCTGACCTTTTCAAATGCGATGACTTACAATCCTCGTGGG CATGTAGTGCATGATTATGCCATTCAACTAAACAAGATGTTTGAATCAAGATGGAGGACA ATTGAAAAGAAGCTGGCTTCCATTGCCACAGAGGCGCACGTCGAGGTTGACAGGGCTGAC TCAAAGAGGAGGAAGACTCCCCCTGTGGACTGCAGTGAGGTGTCAACAGAGTGTGTGAGG CCAACAGAGTCTGTTAGACCAACAGAGTCTGTAAAGCCAAAAATGACATTCGAGGAGAAA GAATCATTTGGGAACTGTTTGGCATCTTTGTCTGAGGATCCGGAGGTACCTTCACACATC ATTGATTTGTTGCAGCAATGCATTGACAACAACACAGATCAGCTTGGTGATGGAGAGATA GAGATTGATATCCATGCTGTCAGTGATGACCTACTATTCGAGTTGAAGAAACATGTTGAC AAGTATTTGCAAGAGAGAGAGCAGAGCCAGCAGGCAAAATCTGAGCCTTCTGAGAATGAG GCTGCTAATGTATCTGGCCTTAGCCACTCCTCTACAAATCCCTGCAAAGGTGGTGATCCA GTTGAGGAGGATGTAGATATTTGCGGGAATGCATCCCCTATATTGATAGAAAAAGATGCA CACAACAATCCTAACAAGTGTGGTAGCCCAAGTAGTTCCAGCAGTGACTCTGGATCTTCT TCCAGCGATTCTGAGTCGGGCAGTGACAGTGAAAGCGAACAAGAAAAAGGTGGTAGCCCA GGAAAGCCGAAGGGAAGTAAGAGATCTGAACAACTGGTGGAGCAAGAAAAGAGTGATGTT ATAAGTCCAGTCGATGCCATCCGTCCTGCTGATGATGTGGAGCTCCGTGAGCAGGATAAC GAGTCAAAGCCTGCCCCAGAGGGGGAGAATTCAAAACCCGACAGGCAAGTCTCCCCAGAC AAGCTCTTAAGAGCAGCCCTCCTTAGGAGTCGTTATGCTGATGTGATTGTTAAGGCACAG GGGATTCTCAGCCAGGGTGGAGACAAACAGGAGGAGCTGGAAAAGCTCCAGAAGGAAGAG AAAGCAAGGCTGTTGGCTGAAGGAAATGCAGCTATGGAAGCTCGAAGAGCTGAAGCTGAA GCTGAAGCCAAGCGTAAACGGGACCTTGAGAGGGAGAAAGCTCGCCAGGCCCTGCAGGAG ATGGAGAGAACGGTGGAAATCAATGACAACCTCCATCTAAAGGATTTGGAAATGCTTGGA ACGGCAACCACAGAACATATTGTGAGTTCTGTTGATGAGACTAGTCCTGAGCATTCCCAG GATGGCATGCCCAGTTTTCTTCCTGGATCAGGCAATCCATTGGAACAGCTGGGACTCTTC ATGAAAGCAGATGAGGAGGAAGAGGAAGAAGATCCTAGCAGTGTCCCCAGCACTAAAGAT GCAGAGGAAGGAGAGATCAACTAGTCCCAGTGCTTGTGGGCTAGTTGCTGAATTAGCTGT GCATATGGTAGACGCTCCTTCCTTCTGCTTCCAAACTAGCTCGAACAAGGCCCTCAATTT TGATGCTGCTGGATGTCGTAAATTATGCGCCTGGAGTATCGCGGTAACCTGCCCTACAAA TCATCATATGTGCTTGGAGGACGGCACAGCCATAATGGCCGCGACTTGCGGTACTCCGAG CTGTTGTCGGGTGTATGTATGTAGCCATCTTTGAAGTGCCATGGCCAGGCCGCAAGGTGG GTAAGCAATGAGAGGACCAAATGGTTCTTTGCACATAGTGAATTAGTGATCCAGGTGCTA AAGCTCCCAGCGGCAAAAGGTGTTGCCCAGCGGCTTATAGATTTTTCGTTCGTTCGTTCT CTAGTTTTCGGTTTGTCCAATTGCTTCCTGCTGTAAATTCGAATTTTGATGTAGTGGAGG AAGCGATAGTTGTTTGCTGGGCATATGGGCAAATAGGAAAAAGCTTCTGCTTTTCTTGTT TACAGGGAAAAAAAAAGAAAATTCATGCGTCTTTTAGCGCAATTTGTTGTCTCCTGTCAG ATGTTTGTCGACTGTTTGTTGTGGATGTTCAATATTCTCAATACACAAGATATTTCTTGT CTTTCCTC