Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0601600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:23538347:23540226:1 gene:Os02g0601600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0601600-01)
Sequence

ATGCGTCTTATGAGTGTCGGATGCCGCCATGGCGCTGCGAGGGCGCTGCAACCACTTCCA
CTCTGCAGATTGTCTATCTCATCATGTACGCAATCTAGCCGAGATGTCAGCAATGTTAAC
CTCACGGTGGAGGAAGAAGAGGCGGCGAGGCTGATCAAGAATTCGCTCTCAAAGGCACGC
AAGTGGAGTGTACAGGACTTGATTCAGTGCCTTGGAGCCGATTGTTCGGGAATCCGGCTT
ACCGGAAACATTGTGGACACCTTGCTGTTCAAGTTTGGGGATGACTGGAAATCGGCATTG
GGCTTCTTTCAGTGGGCGCAGTCGAGGGATGATTACAGGCACACGGCTTATGCCTGCAAT
CGGATGGTTGACCTGCTTGGGAAGATGAGGCAGATTGACCAAATGTGGGAGCTGTTGTCT
GACATGCACGGCAGAGGGTTGGTCACGGTTGAGACGGTTGCAAAGAGCATCAGGAGGCTG
GCGGGTGCGAGAAGATGGAAGGATGTTGTTTTGCTGTTTGATAAACTGGAGGATATGGGG
TTGGAAAGGAACACAGAGACGATGAATGTTCTTCTTGATGTGCTCTGCAAAGAGAGAAAG
ATTGAAGTGGCACGTGAGGTTTTTGCGGTGCTTAGTCCGCACATTCCGCCTGATGCATAC
ACGTTTAACATTTTTGTCCATGGGTGGTGCAGTATCCGTAGGATCGATGAGGCAATGTGG
ACAATTGAAGAGATGAAAAGACGCGGATTTCCACCTTCAGTCATCACATACACCACTGTT
CTTGAAGCTTATTGTAAGCAGCGCAACTTTAGGAGGGTCTATGAAGTTCTTGATTCAATG
GGTTCTCAGGGCTGTCATCCAAATGTTATCACTTACACCATGATCATGACATCGTTAGCA
AAGTGCGAAAGGTTTGAAGAAGCCTTGAGTGTGTCTCATAGAATGAAGTCATCTGGTTGT
AAGCCTGATACACTATTCTACAACTCCTTGATCAACCTTCTTGGTAAATCAGGCCATTTG
TTCGAGGCTTCCCAAGTATTTCGAGTGGAAATGCCAATGAATGGTGTGTCCCATAATCTG
GCTACCTATAACACCATGATTTCAATCTTTTGCTACTACGGTCGAGATGATGATGCTCTC
AATGTGCTGAAAGAAATGGAAGCACAATCTTGTAAGCCTGACATTCAGTCATATCGGCCG
CTTCTTAGACTTTTTTTAAGCAGAAGAGGCCAAGCTGATACCGTCCGGCACTTGTTGAGT
GAACTTACCAGCAAACATAATCTAGGTTTAGATCTTGATACATACACCCTTCTGATACAT
GGTCTTTGTAGAGTCGGTGATACCGTGTGGGCGTATCAACTGTTTGATGAGATGGTTAGT
AGTGAAATAGCACCTAGGAGTAAAACATGTGTGATGCTTTTGGATGAAGCACAAAGGACA
AACATGGAGACTTATGTTGAAAGAATCGGGAATTACATGAGTTCCTTTGGAATTTCTGTT
TAA

Peptide Sequence

PEP ID

Os02t0601600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:23538347:23540226:1 gene:Os02g0601600 transcript:Os02t0601600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0601600-01)
Sequence

MRLMSVGCRHGAARALQPLPLCRLSISSCTQSSRDVSNVNLTVEEEEAARLIKNSLSKAR
KWSVQDLIQCLGADCSGIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACN
RMVDLLGKMRQIDQMWELLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMG
LERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMW
TIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLA
KCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNL
ATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLS
ELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLDEAQRT
NMETYVERIGNYMSSFGISV

Transcript Sequence

Transcript ID

Os02t0601600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:23538347:23540226:1 gene:Os02g0601600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0601600-01)
Sequence

GCGTCGGCGACGGCGGCGGCTGGCTGGCTGGCTGCCTCACTCCTCTCATCGAAGATCGAT
TTCTCTCCTCCTCAACCCGCTACCTCGCCTCGCTTGGATCGAAGAAGTCCATCCAGTTTG
CTCCGGATTTGATTGCTGCGTGCGTGGAGTACTGTACTGACAGCGGTTTCTTCCCAAGAA
TTTTTGGGGATTTTTGGGGATTCAGCTTGAGCCTTCATGCTCCAACTTAGGTGCTGCTCC
TGATGCGTCTTATGAGTGTCGGATGCCGCCATGGCGCTGCGAGGGCGCTGCAACCACTTC
CACTCTGCAGATTGTCTATCTCATCATGTACGCAATCTAGCCGAGATGTCAGCAATGTTA
ACCTCACGGTGGAGGAAGAAGAGGCGGCGAGGCTGATCAAGAATTCGCTCTCAAAGGCAC
GCAAGTGGAGTGTACAGGACTTGATTCAGTGCCTTGGAGCCGATTGTTCGGGAATCCGGC
TTACCGGAAACATTGTGGACACCTTGCTGTTCAAGTTTGGGGATGACTGGAAATCGGCAT
TGGGCTTCTTTCAGTGGGCGCAGTCGAGGGATGATTACAGGCACACGGCTTATGCCTGCA
ATCGGATGGTTGACCTGCTTGGGAAGATGAGGCAGATTGACCAAATGTGGGAGCTGTTGT
CTGACATGCACGGCAGAGGGTTGGTCACGGTTGAGACGGTTGCAAAGAGCATCAGGAGGC
TGGCGGGTGCGAGAAGATGGAAGGATGTTGTTTTGCTGTTTGATAAACTGGAGGATATGG
GGTTGGAAAGGAACACAGAGACGATGAATGTTCTTCTTGATGTGCTCTGCAAAGAGAGAA
AGATTGAAGTGGCACGTGAGGTTTTTGCGGTGCTTAGTCCGCACATTCCGCCTGATGCAT
ACACGTTTAACATTTTTGTCCATGGGTGGTGCAGTATCCGTAGGATCGATGAGGCAATGT
GGACAATTGAAGAGATGAAAAGACGCGGATTTCCACCTTCAGTCATCACATACACCACTG
TTCTTGAAGCTTATTGTAAGCAGCGCAACTTTAGGAGGGTCTATGAAGTTCTTGATTCAA
TGGGTTCTCAGGGCTGTCATCCAAATGTTATCACTTACACCATGATCATGACATCGTTAG
CAAAGTGCGAAAGGTTTGAAGAAGCCTTGAGTGTGTCTCATAGAATGAAGTCATCTGGTT
GTAAGCCTGATACACTATTCTACAACTCCTTGATCAACCTTCTTGGTAAATCAGGCCATT
TGTTCGAGGCTTCCCAAGTATTTCGAGTGGAAATGCCAATGAATGGTGTGTCCCATAATC
TGGCTACCTATAACACCATGATTTCAATCTTTTGCTACTACGGTCGAGATGATGATGCTC
TCAATGTGCTGAAAGAAATGGAAGCACAATCTTGTAAGCCTGACATTCAGTCATATCGGC
CGCTTCTTAGACTTTTTTTAAGCAGAAGAGGCCAAGCTGATACCGTCCGGCACTTGTTGA
GTGAACTTACCAGCAAACATAATCTAGGTTTAGATCTTGATACATACACCCTTCTGATAC
ATGGTCTTTGTAGAGTCGGTGATACCGTGTGGGCGTATCAACTGTTTGATGAGATGGTTA
GTAGTGAAATAGCACCTAGGAGTAAAACATGTGTGATGCTTTTGGATGAAGCACAAAGGA
CAAACATGGAGACTTATGTTGAAAGAATCGGGAATTACATGAGTTCCTTTGGAATTTCTG
TTTAAGTTTTT