Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0600400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:23480321:23486812:1 gene:Os02g0600400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:d-glucose 6-phosphate dehydrogenase 1 description:Similar to Glucose-6-phosphate dehydrogenase. (Os02t0600400-01)
Sequence

ATGTCAGGAGGATCTGGTGATTCTTCCCCTTCATCAGGGCGGGCTAGCTTCAGTTCTTTG
TCAGGTTTGAAGGACCTAGAACTGTCTTCAGAGTCTGGTTGCTTGTCCATTGTGGTCCTA
GGTGCTTCTGGAGACCTTGCTAAGAAGAAAACATTCCCAGCGCTGTTTCACCTCTTTCAG
CAGGGATTTCTACAATCTGGAGAAGTCCATATATTTGGGTATGCAAGATCAAATATTTCG
GATGATGGATTAAGAGAACGCATTCGTGGATACCTCAAAGGAGCTTCAGATGAACATATT
TCACAATTTTTGCAATTAATTAAATATGTTAGTGGTTCCTACAATAGCGGGGAAGGATTT
GCATCATTAAATAACGCCATTTCAGAGAATGAAACTTCGAAGAACAACAAACCAGGAAGC
TCACGTAGACTATTTTATTTGGCATTGCCTCCATCAGTCTACCCCTCAGTATGCAAAATG
ATAAGATCATACTGCATGAATCCATCTTCTCATTCTGGCTGGACAAGGGTTATTGTTGAA
AAGCCCTTTGGGAAGGACTTGGAGTCTGCAGAGGAACTCAGTGCCCAGCTTGGAGAGCTG
TTTAATGAACAACAGCTGTACAGAATTGACCACTATTTAGGAAAAGAATTGGTCCAAAAT
CTGCTTGTGCTTCGCTTTGCAAACCGTTTGTTCCTACCTCTTTGGAATCGTGATAACATT
GCTAATGTACAGATTGTATTCAGAGAGGACTTTGGGACTGAAGGACGTGGAGGGTACTTT
GATCAATATGGCATCATTCGTGATATCATTCAGAACCATTTGTTGCAGGTCTTCTGTTTG
GTGGCTATGGAAAAGCCTGTCTCTCTTAAGCCTGAGCACATAAGAGATGAAAAAGTCAAG
GTTCTTCAGTCAGTGACACCTATAAAGCATGATGAGGTGGTCCTTGGGCAATATGATGGC
TACAAGGATGACTCTACGGTACCAGATGACTCCAACACACCTACTTTTGCATCTCTTGTA
TTGAGGGTAAACAATGAAAGATGGGAAGGAGTTCCTTTCATTCTCAAGGCTGGCAAAGCA
CTGAACAATAGGAAAGCAGAGATACGTGTGCAGTTCAAGGATGCTCCTGGTGACATTTTT
AAATGCAAGAAGCAAGGAAGGAATGAATTCGTTATACGGTTGCAGCCATCGGAAGCCATG
TATATGAAATTAACTGTCAAGAAACCCGGACTAGAAATGGCAACCGAACAAAGCGAGCTG
GATCTGTCATATGGGCTACGCTACCAAGACGTGAAGATCCCAGAAGCGTATGAACGCCTC
ATCCTGGATACGATAAGAGGGGATCAGCAGCACTTTGTTCGCCGAGACGAACTGAAGGCT
GCGTGGGAGATCTTCACTCCGCTGCTGCACGACATCGACGACGGCAAGGTGAAGGCCCTG
CCGTACAAGCCGGGAACCCGGGGACCCCCAGAGGCCGACGAGCTGAGCAAGAGGATGGGC
TACGTGCAGACCCATGGCTACGTTTGGATACCTCCAACCCTTTCAAAATTCTAG

Peptide Sequence

PEP ID

Os02t0600400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:23480321:23486812:1 gene:Os02g0600400 transcript:Os02t0600400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:d-glucose 6-phosphate dehydrogenase 1 description:Similar to Glucose-6-phosphate dehydrogenase. (Os02t0600400-01)
Sequence

MSGGSGDSSPSSGRASFSSLSGLKDLELSSESGCLSIVVLGASGDLAKKKTFPALFHLFQ
QGFLQSGEVHIFGYARSNISDDGLRERIRGYLKGASDEHISQFLQLIKYVSGSYNSGEGF
ASLNNAISENETSKNNKPGSSRRLFYLALPPSVYPSVCKMIRSYCMNPSSHSGWTRVIVE
KPFGKDLESAEELSAQLGELFNEQQLYRIDHYLGKELVQNLLVLRFANRLFLPLWNRDNI
ANVQIVFREDFGTEGRGGYFDQYGIIRDIIQNHLLQVFCLVAMEKPVSLKPEHIRDEKVK
VLQSVTPIKHDEVVLGQYDGYKDDSTVPDDSNTPTFASLVLRVNNERWEGVPFILKAGKA
LNNRKAEIRVQFKDAPGDIFKCKKQGRNEFVIRLQPSEAMYMKLTVKKPGLEMATEQSEL
DLSYGLRYQDVKIPEAYERLILDTIRGDQQHFVRRDELKAAWEIFTPLLHDIDDGKVKAL
PYKPGTRGPPEADELSKRMGYVQTHGYVWIPPTLSKF

Transcript Sequence

Transcript ID

Os02t0600400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:23480321:23486812:1 gene:Os02g0600400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:d-glucose 6-phosphate dehydrogenase 1 description:Similar to Glucose-6-phosphate dehydrogenase. (Os02t0600400-01)
Sequence

GGTGGATGGAAAGCGGGTGTGAGTGAGGAAGATCCCCCTATAAATCGCACCCGGAAAAGA
TCACCATCCATTGCCCAATTCGCCGTCGTCGTCTTCTTCTTCCACCTCGGGAAGTCAAAT
CTCGTCGCCACTGCTGGTTTTGTCTCCAAAGGAAGAGACCATACAGTTCATCATGTCAGG
AGGATCTGGTGATTCTTCCCCTTCATCAGGGCGGGCTAGCTTCAGTTCTTTGTCAGGTTT
GAAGGACCTAGAACTGTCTTCAGAGTCTGGTTGCTTGTCCATTGTGGTCCTAGGTGCTTC
TGGAGACCTTGCTAAGAAGAAAACATTCCCAGCGCTGTTTCACCTCTTTCAGCAGGGATT
TCTACAATCTGGAGAAGTCCATATATTTGGGTATGCAAGATCAAATATTTCGGATGATGG
ATTAAGAGAACGCATTCGTGGATACCTCAAAGGAGCTTCAGATGAACATATTTCACAATT
TTTGCAATTAATTAAATATGTTAGTGGTTCCTACAATAGCGGGGAAGGATTTGCATCATT
AAATAACGCCATTTCAGAGAATGAAACTTCGAAGAACAACAAACCAGGAAGCTCACGTAG
ACTATTTTATTTGGCATTGCCTCCATCAGTCTACCCCTCAGTATGCAAAATGATAAGATC
ATACTGCATGAATCCATCTTCTCATTCTGGCTGGACAAGGGTTATTGTTGAAAAGCCCTT
TGGGAAGGACTTGGAGTCTGCAGAGGAACTCAGTGCCCAGCTTGGAGAGCTGTTTAATGA
ACAACAGCTGTACAGAATTGACCACTATTTAGGAAAAGAATTGGTCCAAAATCTGCTTGT
GCTTCGCTTTGCAAACCGTTTGTTCCTACCTCTTTGGAATCGTGATAACATTGCTAATGT
ACAGATTGTATTCAGAGAGGACTTTGGGACTGAAGGACGTGGAGGGTACTTTGATCAATA
TGGCATCATTCGTGATATCATTCAGAACCATTTGTTGCAGGTCTTCTGTTTGGTGGCTAT
GGAAAAGCCTGTCTCTCTTAAGCCTGAGCACATAAGAGATGAAAAAGTCAAGGTTCTTCA
GTCAGTGACACCTATAAAGCATGATGAGGTGGTCCTTGGGCAATATGATGGCTACAAGGA
TGACTCTACGGTACCAGATGACTCCAACACACCTACTTTTGCATCTCTTGTATTGAGGGT
AAACAATGAAAGATGGGAAGGAGTTCCTTTCATTCTCAAGGCTGGCAAAGCACTGAACAA
TAGGAAAGCAGAGATACGTGTGCAGTTCAAGGATGCTCCTGGTGACATTTTTAAATGCAA
GAAGCAAGGAAGGAATGAATTCGTTATACGGTTGCAGCCATCGGAAGCCATGTATATGAA
ATTAACTGTCAAGAAACCCGGACTAGAAATGGCAACCGAACAAAGCGAGCTGGATCTGTC
ATATGGGCTACGCTACCAAGACGTGAAGATCCCAGAAGCGTATGAACGCCTCATCCTGGA
TACGATAAGAGGGGATCAGCAGCACTTTGTTCGCCGAGACGAACTGAAGGCTGCGTGGGA
GATCTTCACTCCGCTGCTGCACGACATCGACGACGGCAAGGTGAAGGCCCTGCCGTACAA
GCCGGGAACCCGGGGACCCCCAGAGGCCGACGAGCTGAGCAAGAGGATGGGCTACGTGCA
GACCCATGGCTACGTTTGGATACCTCCAACCCTTTCAAAATTCTAGCCGCTATGTACCAA
TGCAGGCTCTGTCTAGATGCCGGTTTATCAGGAGCTTTGTAATATTTTTTTTAAAAGAAC
TCCTACTACTTCGCCTGTCTAGAACACTGTAATGTTGGTGATCTTGGAATAAAAAGAAGA
CTATATATGCTGCAAGTAAGCAAGTTACACATGTTGTGGTTAGAGTTGGACCTGTTATGA
GTTTGCCACAAGCAACTATATTATAGGGGCTACTATACCATGGATCTTGTTCAGACAGGA
TGATATCTATAAAGTATCAGACTCTGGT