Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0600100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:23461505:23465753:1 gene:Os02g0600100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 26S proteasome subunit RPN7. (Os02t0600100-01)
Sequence	ATGGACGCCGGCGGCGAGGAGGCGAAGCAGGAGCGCCACCTGGTGCTGGCCCACAAGCTC TTCCTCCTCTCCCACCCCGACCTCGACGACCTCGCCAAGGTCGCCCTCCGCTCCGACGCC CTCGACGCCGTCAAGTCCGATGGCATGGCGCCGCTGTTCGAGTCGCTGGCCGCCGCGGGC GTCCTGGAGCCGGACGACGCGCTGCTCGCCGAGATGCGCGCGCGGATCGACGAGGAGGTC CGCAAGCTCGACGAGAAAATTGCTGATGCTGAAGAGAATTTGGGTGAGAGCGAAGTGCGT GAGGCCCATCTGGCGAAATCCTTGTACTTCATGAGGGTTGGAGAGAAGGAAAAAGCACTG GAGCAGCTTAAAGTTACTGAAGGGAAAACTGTAGCTGTTGGCCAGAAAATGGATCTTGTG TTCTACACTTTGCAAATAGGCCTTTTCCACATGGACTTTGATCTCATCTCAAAATCCATT GACAAGGCAAAGAACCTGTTTGAGGAAGGAGGCGACTGGGAGAGAAAGAACCGATTGAAA GTATATGAAGGCCTATACTTCATGGCAACGAGAAACTTCAAGAAAGCTGCCAGCTTATTT TTAGATTCCATCTCAACTTTCACAACTTACGAGTTGTTTCCATATGATACTTTTGTCTTC TATACAGTCATCACAAGCATAATCACATTGGATCGTGTATCTCTAAAACAAAAGGTGGTA GATGCACCAGAAATTTTGGCAGTGATTGGCAAAGTACCTCATCTATCTGAGTTTCTGAAC TCCCTTTACAATTGCCAGTACAAGTCATTTTTTGTTGCATTCTCTGGCATGACGGAGCAG ATTAAGTTGGATCGCTATCTTCAGCCTCATTTCCGCTACTATATGAGGGAAGTGCGGACC GTTGTCTATTCACAGTTTTTGGAGTCATACAAGAGTGTGACAATGGAAGCGATGGCCGCA GCATTTGGTGTGACTGTTGATTTCATAGACCAGGAATTGTCGCGGTTCATTGCAGCTGGG AAGCTTCACTGCAAGATCGATAAGGTTGCTGGTGTTCTGGAGACAAACCGACCTGACGCT AGGAATGCCTTCTACCAAGCGACCATCAAGCAAGGGGACTTCTTGCTGAACCGCATCCAG AAACTGTCACGAGTCATTGACTTGTAA

Peptide Sequence

PEP ID	Os02t0600100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:23461505:23465753:1 gene:Os02g0600100 transcript:Os02t0600100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 26S proteasome subunit RPN7. (Os02t0600100-01)
Sequence	MDAGGEEAKQERHLVLAHKLFLLSHPDLDDLAKVALRSDALDAVKSDGMAPLFESLAAAG VLEPDDALLAEMRARIDEEVRKLDEKIADAEENLGESEVREAHLAKSLYFMRVGEKEKAL EQLKVTEGKTVAVGQKMDLVFYTLQIGLFHMDFDLISKSIDKAKNLFEEGGDWERKNRLK VYEGLYFMATRNFKKAASLFLDSISTFTTYELFPYDTFVFYTVITSIITLDRVSLKQKVV DAPEILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGMTEQIKLDRYLQPHFRYYMREVRT VVYSQFLESYKSVTMEAMAAAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDA RNAFYQATIKQGDFLLNRIQKLSRVIDL

Transcript Sequence

Transcript ID	Os02t0600100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:23461505:23465753:1 gene:Os02g0600100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 26S proteasome subunit RPN7. (Os02t0600100-01)
Sequence	AACCGCGAACCCCCAACTCCGACGAGAACGACATGGACGCCGGCGGCGAGGAGGCGAAGC AGGAGCGCCACCTGGTGCTGGCCCACAAGCTCTTCCTCCTCTCCCACCCCGACCTCGACG ACCTCGCCAAGGTCGCCCTCCGCTCCGACGCCCTCGACGCCGTCAAGTCCGATGGCATGG CGCCGCTGTTCGAGTCGCTGGCCGCCGCGGGCGTCCTGGAGCCGGACGACGCGCTGCTCG CCGAGATGCGCGCGCGGATCGACGAGGAGGTCCGCAAGCTCGACGAGAAAATTGCTGATG CTGAAGAGAATTTGGGTGAGAGCGAAGTGCGTGAGGCCCATCTGGCGAAATCCTTGTACT TCATGAGGGTTGGAGAGAAGGAAAAAGCACTGGAGCAGCTTAAAGTTACTGAAGGGAAAA CTGTAGCTGTTGGCCAGAAAATGGATCTTGTGTTCTACACTTTGCAAATAGGCCTTTTCC ACATGGACTTTGATCTCATCTCAAAATCCATTGACAAGGCAAAGAACCTGTTTGAGGAAG GAGGCGACTGGGAGAGAAAGAACCGATTGAAAGTATATGAAGGCCTATACTTCATGGCAA CGAGAAACTTCAAGAAAGCTGCCAGCTTATTTTTAGATTCCATCTCAACTTTCACAACTT ACGAGTTGTTTCCATATGATACTTTTGTCTTCTATACAGTCATCACAAGCATAATCACAT TGGATCGTGTATCTCTAAAACAAAAGGTGGTAGATGCACCAGAAATTTTGGCAGTGATTG GCAAAGTACCTCATCTATCTGAGTTTCTGAACTCCCTTTACAATTGCCAGTACAAGTCAT TTTTTGTTGCATTCTCTGGCATGACGGAGCAGATTAAGTTGGATCGCTATCTTCAGCCTC ATTTCCGCTACTATATGAGGGAAGTGCGGACCGTTGTCTATTCACAGTTTTTGGAGTCAT ACAAGAGTGTGACAATGGAAGCGATGGCCGCAGCATTTGGTGTGACTGTTGATTTCATAG ACCAGGAATTGTCGCGGTTCATTGCAGCTGGGAAGCTTCACTGCAAGATCGATAAGGTTG CTGGTGTTCTGGAGACAAACCGACCTGACGCTAGGAATGCCTTCTACCAAGCGACCATCA AGCAAGGGGACTTCTTGCTGAACCGCATCCAGAAACTGTCACGAGTCATTGACTTGTAAA TTCAATGGTCTACGTTGGACGTTGGAGGTGTGATCCTTCTAGATCCCTGCAAAGCTCCCC ATGGACATAAACCGTACTGAAATTGCTGTTCTACTTGTACTCCTAGGCTCATGAGAACAT GATCTTTATCTCGGTTTGATTTTATTGCGGACAGCAAAAAGGTTTTAAAG