Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0597700-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:23228826:23230766:1 gene:Os02g0597700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os02t0597700-00)
Sequence

ATGATCAAGCTGAGGTACTCCAAGAGGCTGTTCAAGAGGAGCTGCTCCTCGTCGAAGGCG
ACTGCTTGTGTCGGTGGCGGCGGCGGCGGCCATGGCAATGCGGTGGCCGCCGGCGGCGGC
GGCGGCGGCGCGGGGGAGATAGGGTGGGAGGTGAGGCCGGGAGGGATGCTGGTGCAGAAG
AGGGAGGGGAGAGGCGGCGAGGAGGTGATCTTGGTGAGGGTGTCCACTGGCTTCGCCTGG
CACGACGTGTCCATTGCTGCGACCTCCACATTCGGTGAGCTGAAGGTGAGGTTGTCCATG
GTGACAGGGCTAGAGCCCAGGGAGCAGAGGCTGCTGTTTAGGGGCAAGGAAAGGGAGGAT
ACCGATCACCTCCACATGGTTGGGGTGAGGGACAAGGACAAGGTCCTCCTCCTCGAGGAC
CCTGCCCTTAAGGACATGAAGGTCCGGGCTGCCCTCGCAGCAGCCCGGGTCATGCAGAGC
CCGTGCCAGCCTTTTATCCAAGTCTAA

Peptide Sequence

PEP ID

Os02t0597700-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:23228826:23230766:1 gene:Os02g0597700 transcript:Os02t0597700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os02t0597700-00)
Sequence

MIKLRYSKRLFKRSCSSSKATACVGGGGGGHGNAVAAGGGGGGAGEIGWEVRPGGMLVQK
REGRGGEEVILVRVSTGFAWHDVSIAATSTFGELKVRLSMVTGLEPREQRLLFRGKERED
TDHLHMVGVRDKDKVLLLEDPALKDMKVRAALAAARVMQSPCQPFIQV

Transcript Sequence

Transcript ID

Os02t0597700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:23228826:23230766:1 gene:Os02g0597700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os02t0597700-00)
Sequence

GCCATGATCAAGCTGAGGTACTCCAAGAGGCTGTTCAAGAGGAGCTGCTCCTCGTCGAAG
GCGACTGCTTGTGTCGGTGGCGGCGGCGGCGGCCATGGCAATGCGGTGGCCGCCGGCGGC
GGCGGCGGCGGCGCGGGGGAGATAGGGTGGGAGGTGAGGCCGGGAGGGATGCTGGTGCAG
AAGAGGGAGGGGAGAGGCGGCGAGGAGGTGATCTTGGTGAGGGTGTCCACTGGCTTCGCC
TGGCACGACGTGTCCATTGCTGCGACCTCCACATTCGGTGAGCTGAAGGTGAGGTTGTCC
ATGGTGACAGGGCTAGAGCCCAGGGAGCAGAGGCTGCTGTTTAGGGGCAAGGAAAGGGAG
GATACCGATCACCTCCACATGGTTGGGGTGAGGGACAAGGACAAGGTCCTCCTCCTCGAG
GACCCTGCCCTTAAGGACATGAAGGTCCGGGCTGCCCTCGCAGCAGCCCGGGTCATGCAG
AGCCCGTGCCAGCCTTTTATCCAAGTCTAAGGGTTAGTTGGCCGTGACCCCTGTTCTGTT
ACCACGCTAACTATTAGAGTACTATTAATAAGTTGTACTACAATTTTAGTCGATCGACAT
CTCAATTTCTGGAAGGTTTTATTATATCCGGAATAGGTGGGGGGTTGGTGCTGTTCACCC
CCTCCTCTCTTTAGTTTACTGTCAGTGGTGCCACTCCATGTTGCAAGTGTCCAGCCATGG
TGGTTGTGATGTGATGTGATGCTAAGCTTTGGTGCTGGGCTCCTATGGTCCCTGGTACTG
TGCTCTGGTCTTTTTCCCATTCCTACATA