Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0596500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:23159865:23163343:-1 gene:Os02g0596500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Charged multivesicular body protein 6. (Os02t0596500-01)
Sequence

CAGCAGCACGCGGCCATGGGGAACATCTTCGTGAAGAAGCCCAAGGTGACGGACGTGGAC
AGGGCCATCCTCACCCTCAAGACGCAGCGCCGGAAGCTCGCGCAGTTCCAGCAGCAGCTT
GAGAAGGTGATTGAAGCAGAAAAGGAAGCTGCACGGCAGCTAGTTCAACAAAAGAAGAAA
GACAGAGCTTTGATTGCACTGAAGAAGAAGAAAGCACAGGAAGAGCTGCTGAAACAAGTT
GACACATGGCAAATGAATGTCGAACAACAGCTGTCAGACATTGAACTAGCAAGTAAACAG
AAGGCTGTATTTGACAGCCTAAAAGCTGGAAATGCTGCTCTTAAGTCTATCCAGAATGAG
ATAAATATTGATGATGTCCAAAAGTTGATGGACGACACAGCTGAGGCCAAGGCTTACCAA
GATGAGATAAATGCTGCTCTGGGTGAGCAGCTATCTGCTGAGGATGAGGAGGCTGTTATG
GCTGAATTTGAGAACTTGGAAGCACAGCTTGCCGTTGAGTCTCTACCAGATGCTCCAGTT
ACTGAAGTACGGCCTGAGGAGAAATCAGAAACACCTGCTGTCACTGAGGCTGCAGAAGAC
ATTGACGAGGTTATTGAGCTTCCTGATGTACCCACTAAGGCACCAGAGAGACCAGAAGCT
GCAGAAAAAACAAAAGTTTTGGAAGAACCCCTACCTGCATAG

Peptide Sequence

PEP ID

Os02t0596500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:23159865:23163343:-1 gene:Os02g0596500 transcript:Os02t0596500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Charged multivesicular body protein 6. (Os02t0596500-01)
Sequence

QQHAAMGNIFVKKPKVTDVDRAILTLKTQRRKLAQFQQQLEKVIEAEKEAARQLVQQKKK
DRALIALKKKKAQEELLKQVDTWQMNVEQQLSDIELASKQKAVFDSLKAGNAALKSIQNE
INIDDVQKLMDDTAEAKAYQDEINAALGEQLSAEDEEAVMAEFENLEAQLAVESLPDAPV
TEVRPEEKSETPAVTEAAEDIDEVIELPDVPTKAPERPEAAEKTKVLEEPLPA

Transcript Sequence

Transcript ID

Os02t0596500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:23159865:23163343:-1 gene:Os02g0596500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Charged multivesicular body protein 6. (Os02t0596500-01)
Sequence

AGCTTACGGTTACCGTGCCCGTCTCCTCCTCGACCTCGAGAGTCCACCTTTCCCCCTCCC
CTTCCACCTCCCCTCTCCGGCCATCTCCGCCGCCGCCGCGTCGGAAGGAAGAAGAGGGCG
CCGGGTAGGTAGCAGCAGCACGCGGCCATGGGGAACATCTTCGTGAAGAAGCCCAAGGTG
ACGGACGTGGACAGGGCCATCCTCACCCTCAAGACGCAGCGCCGGAAGCTCGCGCAGTTC
CAGCAGCAGCTTGAGAAGGTGATTGAAGCAGAAAAGGAAGCTGCACGGCAGCTAGTTCAA
CAAAAGAAGAAAGACAGAGCTTTGATTGCACTGAAGAAGAAGAAAGCACAGGAAGAGCTG
CTGAAACAAGTTGACACATGGCAAATGAATGTCGAACAACAGCTGTCAGACATTGAACTA
GCAAGTAAACAGAAGGCTGTATTTGACAGCCTAAAAGCTGGAAATGCTGCTCTTAAGTCT
ATCCAGAATGAGATAAATATTGATGATGTCCAAAAGTTGATGGACGACACAGCTGAGGCC
AAGGCTTACCAAGATGAGATAAATGCTGCTCTGGGTGAGCAGCTATCTGCTGAGGATGAG
GAGGCTGTTATGGCTGAATTTGAGAACTTGGAAGCACAGCTTGCCGTTGAGTCTCTACCA
GATGCTCCAGTTACTGAAGTACGGCCTGAGGAGAAATCAGAAACACCTGCTGTCACTGAG
GCTGCAGAAGACATTGACGAGGTTATTGAGCTTCCTGATGTACCCACTAAGGCACCAGAG
AGACCAGAAGCTGCAGAAAAAACAAAAGTTTTGGAAGAACCCCTACCTGCATAGGGGGAT
GGAACTGAGTTGGATAGGGACCTCCAGGTTGCCAAATCTGCAGGAGTTGTAAATTATCTG
CCATTTCATTGTAATACCACACCCGCAAGTTGTCTCAGAATTTTAATGTGTACAGCATCT
AAATATGTTTGCTTCAAATTTTCAGTTATCAATTCTTGG