Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0594100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:23000073:23005321:1 gene:Os02g0594100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase ATN1. (Os02t0594100-01)
Sequence

ATGGAATCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTC
ATCGACCCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTC
TACGAGGGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACC
CCTGAGGAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGG
GTGCAGCACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTG
GTAACTGAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGG
AGCCTGGAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGT
TTGCATGCGCACGCGATCATTCATCGTGATCTTAAACCTGAGAACTTGCTGTTGACCGCA
GACCAGAGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAG
ATGATGACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGTTGTACAGCACAGTG
ACATTGAGGCATGGAGAAAAGAAGCATTACAATCATAAAGTAGACGTTTATAGCTTTGCA
ATTGTGTTATGGGAACTCCTTCACAATAGACTGCCCTTTGAGGGCATGTCTAACCTGCAA
GCTGCTTATGCTGCTGCTTTCAAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAG
CTATCAGAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACG
CAGATCGTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCT
CCGCCTCGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGC
TCCCTAATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAG
CCAAGGGGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAG

Peptide Sequence

PEP ID

Os02t0594100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:23000073:23005321:1 gene:Os02g0594100 transcript:Os02t0594100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase ATN1. (Os02t0594100-01)
Sequence

MESGSEFYAGEGLQIDPKWLIDPKLLFVGPRIGEGAHAKVYEGKYKNQNVAIKIVHKGDT
PEEMVKREGRFLREVTMLSRVQHKNLVKFIGACLEPVMVVVTELLVGGSLRKYLVGLRPR
SLEPRVAVGFALDIARAMECLHAHAIIHRDLKPENLLLTADQRTVKLVDLGLAREETLTE
MMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDVYSFAIVLWELLHNRLPFEGMSNLQ
AAYAAAFKNIRPSADNLPEELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPPEPLA
PPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY

Transcript Sequence

Transcript ID

Os02t0594100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:23000073:23005321:1 gene:Os02g0594100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase ATN1. (Os02t0594100-01)
Sequence

GCTCCCTCCGACCGACCGCCACACCACCACCCCCCACCCCTCTTCTCTCTCTCTCTCTCT
CTCTCTCTCCACATCCCCATCGTCTCTCACCGCGTTGCTGCTGCTGCTGCCGCCTCGGCC
ACCGCGCGCCCGCCCGCGCGTCGCACGCAGCTTCTTCCTCTTCTTCTTCTTCCCCACCCT
CTCCACCCGATGCGGCGGTCGGCGCCGCGCTGCTGCTGCTGATGCGGGCGGTGGTGAAGA
GGCGACGAGGGGGAGAGCGCGGGCGCTGCTGCGGCTATTGGAGATCCGGGGCTTCGTGCG
ATTAGTGGGGTCGTGTGACCCCACGGGACCCAAAGTGGATCCATTTCGACGGGGATGGAA
TCTGGGAGTGAGTTCTATGCGGGCGAAGGTCTCCAGATCGACCCCAAGTGGCTCATCGAC
CCAAAGCTTCTCTTTGTTGGGCCACGGATTGGCGAAGGTGCACATGCAAAGGTCTACGAG
GGGAAGTACAAGAACCAAAATGTTGCCATCAAGATTGTGCACAAGGGGGACACCCCTGAG
GAGATGGTCAAGAGGGAGGGGAGGTTCTTGAGAGAGGTGACTATGCTGTCAAGGGTGCAG
CACAAGAACCTTGTCAAGTTTATCGGGGCTTGCCTTGAGCCTGTCATGGTGGTGGTAACT
GAGCTACTAGTGGGGGGCTCTTTGCGCAAGTACTTGGTTGGCCTTCGGCCTAGGAGCCTG
GAGCCTCGTGTAGCTGTTGGATTTGCGTTGGATATTGCTCGAGCCATGGAATGTTTGCAT
GCGCACGCGATCATTCATCGTGATCTTAAACCTGAGAACTTGCTGTTGACCGCAGACCAG
AGAACAGTCAAGCTTGTTGACCTTGGTTTAGCAAGAGAAGAGACATTAACAGAGATGATG
ACTGCAGAGACAGGAACATACCGTTGGATGGCTCCAGAGTTGTACAGCACAGTGACATTG
AGGCATGGAGAAAAGAAGCATTACAATCATAAAGTAGACGTTTATAGCTTTGCAATTGTG
TTATGGGAACTCCTTCACAATAGACTGCCCTTTGAGGGCATGTCTAACCTGCAAGCTGCT
TATGCTGCTGCTTTCAAGAACATTAGACCTAGTGCAGATAATTTGCCTGAGGAGCTATCA
GAAATCCTAACAACCTGCTGGAAGGAAGAACCCAATGAGAGACCGAACTTCACGCAGATC
GTACAAATGCTTCTGCATTACCTTTCCACCCTTTCGCCACCAGAACCTCTGGCTCCGCCT
CGGACGTTCAGTTCAGAGAATGCAATCTTGCCTCCTGAATCTCCTGGGACAAGCTCCCTA
ATGGCTTCTCGAGGCGACCTCGGCGACACACCGAAGGGCAAGATGGAAGACAAGCCAAGG
GGGTTCTTTTTCTGCTTCAGCCAGTGCTATTAGCACAGAACAAAGGAAACTCCCCTGGAG
GATGCAAATATGAAGAGAACATTACCTCCTGATGCACAGCGGCTCGGATCACGGCCCGGC
GGCGAGTCCCGGTGCCCATAGCCCATACCCAAAGAATGGCAGAAGTTCTTGTAGAACTGT
TGTTTCTGCTAGTCAGTCCACCCCTCTCTTCTTCTGACATGTTTAACATACCGGCAGGAT
AAATCGAGTAAGCTTTTGACTCCTGCTATCAGTGATGAAAATAGTTCTGTCGTATATTTT
CGGTGGACAAGTTATTCAATGTCTAAACTGCGCCCGCTCATCGTATAGTAATAATCCGCA
TTCATCAGTTTTCTCCTGTGCTGG