Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0593700-04
CDS Infomation	cds chromosome:IRGSP-1.0:2:22981864:22987550:-1 gene:Os02g0593700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to TA4 protein (Fragment). (Os02t0593700-01);Similar to Ubiquitin-associated protein. (Os02t0593700-02);Similar to Ubiquitin-associated protein. (Os02t0593700-03);Similar to TA4 protein (Fragment). (Os02t0593700-04)
Sequence	ATGTCCGGCCGGAGCTCGCCGATGTACGAGGGGCTCGCGTCGCGTCCCGACGAGTGGGAC GTCGTCCTCAAGGTGAAGTATGGTGAAACTCTTAAGAGGTTCGGTGGGTATGTGCAAGGA CCACAATTCAGCCTGAACTTATCCGCTCTCCGGTCCAAGATTGCATCTGCTTTTAAGTTT GGTTCGGATGTCGACTTCATTCTGACTTACACTGATGAGGATGGGGATATTGTCATGCTG GATGATGATGATGATCTGCATGATGCTGCTATTCATCAGAAACTGAACCCCCTCAGGATT AATGTTCAGTTAAACAACAGCCACACTGCAGCACCTCAGGCCAAACAGCAGGATTCAGAT AATATACCTCTCAGGTCCACCACCACTGAAGACCCACTAGCTCATATTAAATCAGTTATC GATGAGGTTTTGAAGCCGATATCTATGAAGTCCATCCAGGAGCCAGTTCCTGAGACACTT GCGAAGCTGTCCCATGAAGTACTTGAAGCCGCATCACCACAATTAGCTGAGCTAATAAAA CCTTTTGTTAAACTGGTTACACCAAGCAACAACAACCCATCTAATGGGCATGCTGATGGT TCCTGCAGCTCCTCAACTGGTTTGCCCCAAACACAGGTTGATCCCAAAACTAATGACGAG CCCAAAATAGACACAAGTTTGGGGTCGCAACCCTTGGACACGCAGAACTCCAAATCATCT GGTGCTAGAGGTCTTAAGACTCTGTCAGTTGAGGCTCCTGCTACATCGGGTGTTAAATCT TCTCAAGGTCAACAGGCATCATTATACCCTTCCATTGAGGAGTTGCTGTTCTCCCCCTTT TTACCGAACTCAGGTGATGACAAATCTGCCAGCAAGGGAATTAGTGATGCTCAAAGCAAG GGAAAATCTGTTATGACCTCTGCTACACCACCTACCCCTCCTGCTGCTCCTGCTTTCCGT CCAGCTCCTCCAATTCCATCTCTGAATGATTGGTCTCAGCCACCAGCACGTGGATCGACA TTTTACCCATCTATTTGGCAGTCTGAAGCTGATCCAAAAGCCAATAGTGATTCCAGATGG CGTGTTCCATTGTGCAGAGCTGGCCATCCATTCCAACCCCATGCTCCCCTGAGCCGTCCA CCCCCACCAATGCCTGCACCAATGAGCTATGGACCTTCTCCACATTTTCCTTACCCTGGC CGCCTCTTGTCCTCTGGCCATCTGCATGGAGACCTTGGTAATAACATTGAGAACTCACCA GCACGCACATTCCATAGATGGATTCAGTGTGATGGTTGTGGAGTGCAACCAATTGTTGGG CCTCGATACAAGTCTAAAACAAAAGAAGATTATGATTTGTGTGATGCCTGCTTTCATCGC ATGGGCAATGAGGTCGAGTACACCAGGATTGACAAGCCACTCTTACCCCAGAGATTACTG AGAGACCCTACATTGTGTCGCAAGATCCATTCACGGGCTGCGATGAAGTCAAAGCGGGAG AAACTTGAAAGTCGCTTCATTTTGGATGTAACTGTCCTGGATGGAACATTGATGGCACCT TCAACTCCGTTTACTAAGATTTGGCGTATGCATAACAATGGGTCTATCATGTGGCCCTTG GGCACACAGCTTATATGGGTTGGTGGCGACCAGTTTGCACTGCAGACCTATGTTCCATTA GAGATTCCAGTGGACGGGTTTCCTGTTGATCAGGAGATTGATGTTGCTGTTGATTTTGTG GCACCTGCAAGGCCTGGGAGGTATATATCTTACTGGAGGTTAGCATCACCTTCTGGCCAG AAATTTGGTCAGCGTGTTTGGGTTCACATCCAGGTGGAGGATCCTTCTTTTGTCAGTAAC AACAGGACTGCCGCTATAAACTTGAATTTGCCCCCAGAAAGCAATATCACAAACACAAGT AATTTGATTGATGTCAATATTGAGCCTGTGGATCAAGTCTTCAACCAACATGTCAATAGC ACAAACAAGGAGTTACTTGAACATTTGATACACCACCAGATTGACGAGCCCAAGAATCCT GAGCCTGCTCCATTACCTGTGCCCATTGTTTCTTCCACAACATCTCTTCACCCCATCATT GATGTTGATGTTCCCTCCAGTTCAACTGCTGCTGCTTTTGTGCCTGTCTTTGATGAGCCT GCGCCTGAACCTGCTGTGACTCCTGTGCCTCCAACTGTTAATGTGCCTGCTGGTAATGCA CCTGCGTCTGTTGGTGCATCATCATCTGATCATCATGGCATTGACAATCTCACAGAAGAG AAACTGCTGAAGGAACTTGAGGAAATGGGTTTTAGGCAGGTCGATCTGAACAAGGAGATA CTCAGGCAGAACAAGTACAACCTGGAGCAGTCTGTCGATGATCTCTGTGGCGTCAGCGAA TGGGACCCTCTCCTGGAGGAGTTGCAGGAAATGGGCTTTGAGGACACTGAGATAAACAAG GAGATGCTCGAGAAGAACGGAGGAAGCATCAAGCGGGCTGTGATGGACCTCATCGCTAGG GAGAAGAAAGACCAGTGA

Peptide Sequence

PEP ID	Os02t0593700-04
PEP Infomation	pep chromosome:IRGSP-1.0:2:22981864:22987550:-1 gene:Os02g0593700 transcript:Os02t0593700-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to TA4 protein (Fragment). (Os02t0593700-01);Similar to Ubiquitin-associated protein. (Os02t0593700-02);Similar to Ubiquitin-associated protein. (Os02t0593700-03);Similar to TA4 protein (Fragment). (Os02t0593700-04)
Sequence	MSGRSSPMYEGLASRPDEWDVVLKVKYGETLKRFGGYVQGPQFSLNLSALRSKIASAFKF GSDVDFILTYTDEDGDIVMLDDDDDLHDAAIHQKLNPLRINVQLNNSHTAAPQAKQQDSD NIPLRSTTTEDPLAHIKSVIDEVLKPISMKSIQEPVPETLAKLSHEVLEAASPQLAELIK PFVKLVTPSNNNPSNGHADGSCSSSTGLPQTQVDPKTNDEPKIDTSLGSQPLDTQNSKSS GARGLKTLSVEAPATSGVKSSQGQQASLYPSIEELLFSPFLPNSGDDKSASKGISDAQSK GKSVMTSATPPTPPAAPAFRPAPPIPSLNDWSQPPARGSTFYPSIWQSEADPKANSDSRW RVPLCRAGHPFQPHAPLSRPPPPMPAPMSYGPSPHFPYPGRLLSSGHLHGDLGNNIENSP ARTFHRWIQCDGCGVQPIVGPRYKSKTKEDYDLCDACFHRMGNEVEYTRIDKPLLPQRLL RDPTLCRKIHSRAAMKSKREKLESRFILDVTVLDGTLMAPSTPFTKIWRMHNNGSIMWPL GTQLIWVGGDQFALQTYVPLEIPVDGFPVDQEIDVAVDFVAPARPGRYISYWRLASPSGQ KFGQRVWVHIQVEDPSFVSNNRTAAINLNLPPESNITNTSNLIDVNIEPVDQVFNQHVNS TNKELLEHLIHHQIDEPKNPEPAPLPVPIVSSTTSLHPIIDVDVPSSSTAAAFVPVFDEP APEPAVTPVPPTVNVPAGNAPASVGASSSDHHGIDNLTEEKLLKELEEMGFRQVDLNKEI LRQNKYNLEQSVDDLCGVSEWDPLLEELQEMGFEDTEINKEMLEKNGGSIKRAVMDLIAR EKKDQ

Transcript Sequence

Transcript ID	Os02t0593700-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:22981864:22987550:-1 gene:Os02g0593700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to TA4 protein (Fragment). (Os02t0593700-01);Similar to Ubiquitin-associated protein. (Os02t0593700-02);Similar to Ubiquitin-associated protein. (Os02t0593700-03);Similar to TA4 protein (Fragment). (Os02t0593700-04)
Sequence	GGCCGCATCGCCACCGCCACTCTCTCCTCTCCTCCTCTCTCTCTCTCTCTCGCACCACCG CTCTCTTCCGCCGCTGCGGCTCACGGCTACGCAGCTCTCTTCCCCTCCTCCTCGGCTCCG CTCTCTTCGATCGATCTAGGGTTTGGTCTTCTGTTGGGGGATTGTTGTTGCTCTTCCGCG CGATCGATCGACGCCGCGTCCTGAGGGTTTGAGGGGTTTCCGCCCTCCCGCCGCACGCCC GCACCCCCGCGATGTCCGGCCGGAGCTCGCCGATGTACGAGGGGCTCGCGTCGCGTCCCG ACGAGTGGGACGTCGTCCTCAAGGTGAAGTATGGTGAAACTCTTAAGAGGTTCGGTGGGT ATGTGCAAGGACCACAATTCAGCCTGAACTTATCCGCTCTCCGGTCCAAGATTGCATCTG CTTTTAAGTTTGGTTCGGATGTCGACTTCATTCTGACTTACACTGATGAGGATGGGGATA TTGTCATGCTGGATGATGATGATGATCTGCATGATGCTGCTATTCATCAGAAACTGAACC CCCTCAGGATTAATGTTCAGTTAAACAACAGCCACACTGCAGCACCTCAGGCCAAACAGC AGGATTCAGATAATATACCTCTCAGGTCCACCACCACTGAAGACCCACTAGCTCATATTA AATCAGTTATCGATGAGGTTTTGAAGCCGATATCTATGAAGTCCATCCAGGAGCCAGTTC CTGAGACACTTGCGAAGCTGTCCCATGAAGTACTTGAAGCCGCATCACCACAATTAGCTG AGCTAATAAAACCTTTTGTTAAACTGGTTACACCAAGCAACAACAACCCATCTAATGGGC ATGCTGATGGTTCCTGCAGCTCCTCAACTGGTTTGCCCCAAACACAGGTTGATCCCAAAA CTAATGACGAGCCCAAAATAGACACAAGTTTGGGGTCGCAACCCTTGGACACGCAGAACT CCAAATCATCTGGTGCTAGAGGTCTTAAGACTCTGTCAGTTGAGGCTCCTGCTACATCGG GTGTTAAATCTTCTCAAGGTCAACAGGCATCATTATACCCTTCCATTGAGGAGTTGCTGT TCTCCCCCTTTTTACCGAACTCAGGTGATGACAAATCTGCCAGCAAGGGAATTAGTGATG CTCAAAGCAAGGGAAAATCTGTTATGACCTCTGCTACACCACCTACCCCTCCTGCTGCTC CTGCTTTCCGTCCAGCTCCTCCAATTCCATCTCTGAATGATTGGTCTCAGCCACCAGCAC GTGGATCGACATTTTACCCATCTATTTGGCAGTCTGAAGCTGATCCAAAAGCCAATAGTG ATTCCAGATGGCGTGTTCCATTGTGCAGAGCTGGCCATCCATTCCAACCCCATGCTCCCC TGAGCCGTCCACCCCCACCAATGCCTGCACCAATGAGCTATGGACCTTCTCCACATTTTC CTTACCCTGGCCGCCTCTTGTCCTCTGGCCATCTGCATGGAGACCTTGGTAATAACATTG AGAACTCACCAGCACGCACATTCCATAGATGGATTCAGTGTGATGGTTGTGGAGTGCAAC CAATTGTTGGGCCTCGATACAAGTCTAAAACAAAAGAAGATTATGATTTGTGTGATGCCT GCTTTCATCGCATGGGCAATGAGGTCGAGTACACCAGGATTGACAAGCCACTCTTACCCC AGAGATTACTGAGAGACCCTACATTGTGTCGCAAGATCCATTCACGGGCTGCGATGAAGT CAAAGCGGGAGAAACTTGAAAGTCGCTTCATTTTGGATGTAACTGTCCTGGATGGAACAT TGATGGCACCTTCAACTCCGTTTACTAAGATTTGGCGTATGCATAACAATGGGTCTATCA TGTGGCCCTTGGGCACACAGCTTATATGGGTTGGTGGCGACCAGTTTGCACTGCAGACCT ATGTTCCATTAGAGATTCCAGTGGACGGGTTTCCTGTTGATCAGGAGATTGATGTTGCTG TTGATTTTGTGGCACCTGCAAGGCCTGGGAGGTATATATCTTACTGGAGGTTAGCATCAC CTTCTGGCCAGAAATTTGGTCAGCGTGTTTGGGTTCACATCCAGGTGGAGGATCCTTCTT TTGTCAGTAACAACAGGACTGCCGCTATAAACTTGAATTTGCCCCCAGAAAGCAATATCA CAAACACAAGTAATTTGATTGATGTCAATATTGAGCCTGTGGATCAAGTCTTCAACCAAC ATGTCAATAGCACAAACAAGGAGTTACTTGAACATTTGATACACCACCAGATTGACGAGC CCAAGAATCCTGAGCCTGCTCCATTACCTGTGCCCATTGTTTCTTCCACAACATCTCTTC ACCCCATCATTGATGTTGATGTTCCCTCCAGTTCAACTGCTGCTGCTTTTGTGCCTGTCT TTGATGAGCCTGCGCCTGAACCTGCTGTGACTCCTGTGCCTCCAACTGTTAATGTGCCTG CTGGTAATGCACCTGCGTCTGTTGGTGCATCATCATCTGATCATCATGGCATTGACAATC TCACAGAAGAGAAACTGCTGAAGGAACTTGAGGAAATGGGTTTTAGGCAGGTCGATCTGA ACAAGGAGATACTCAGGCAGAACAAGTACAACCTGGAGCAGTCTGTCGATGATCTCTGTG GCGTCAGCGAATGGGACCCTCTCCTGGAGGAGTTGCAGGAAATGGGCTTTGAGGACACTG AGATAAACAAGGAGATGCTCGAGAAGAACGGAGGAAGCATCAAGCGGGCTGTGATGGACC TCATCGCTAGGGAGAAGAAAGACCAGTGAAGATCGTGTGCTCTTGAGCCATCCCTATCTA TAACCTAACTATGTGTGTATATGCGTAAATAATGTGACGAGGTGTAAGGCTAGCGCCGGC CGCCGGGGCTGCTGCTACAGTCTCAGGGCCTGCTTGCTTATGAACTGTGTGTGGTGTTGT GCGACTGGTATATTTGTCGCGGAGATATGTGTTAAGTGCGCGTGCGCGCCTCTTAAAAAG CGGTTACCTTGCCAGGTAAACTGCGTGTAATTACTATGGGCTTAGCTGCTCTATGCCTCT TATCTACTGCTGTGACTGGAACTTGATGGATTAATAAGATCTATGTTGCGT