Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0592200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:22911011:22915632:-1 gene:Os02g0592200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to alkaline phosphatase D. (Os02t0592200-01)
Sequence

ATGGCGACCTCCACGCGGGCGTTGCTCCTCCTCCCCCTCCTCCTCCTCTTCCTCCTCTCC
CGCTCCCTCTCCCTCCGCGCCGATCCCGGCGCCGCCGTGTCCAGGATCGCCTTCGGCTCC
TGCGCCAACCAGAGCGCGCCCCAGCCCGTGTGGGAGGCCGTCGTGGGGTTCGACCCGCAG
GTGTTCATCTGGCTCGGGGACAACGTGTACGGCGACAACAAGAGGCCGTTCCGGGTGTTC
GGGAGGGAGAGGACGGTGGGGCCGTGGAGGAACGTGCCGCGGTTCTACCCGTCGACGGAG
GCCGAGCTGCGGAGGCGCTACGAGATGGCCAAGGCCAAGCCCGGGTACGCCAAGCTCAGG
GAGAGGGCTCAGGTTATTGGAACATGGGATGATCACGATTATGGACTGAATGATGCAGGA
AAAGAGTTTGGTGGGAAGGTGACCTCTCAAAGGCTTCTATTAGATTTTCTGGATGAAGCT
GAAGATAGTTCACGGAGGCAGCAAGCTGGTGTTTATGCCTCCTACATGTTTGGCCCTGAA
GGAAAACGGGTAAAGGTAATTCTGTTGGACACCAGATATCACAGAGACCCTCTATCAAGT
GATGGAGCTGTACTGGGAGATCCTCAGTGGCAATGGCTGGAGAGGGAACTGCATGGTCCT
CGATCAGAGATCACCATCATTGGATCTTCAATACAAGTAATATCAAATCTATCTGCCACC
ACTGGACCTTTGTTCTATGTGGAGTCATGGGCACGCTTTCCAAGGGAAAGAGAACGACTG
TTCAGACTGATCGATAGCAGTAAGAGAAATGGAGTGTTTTTTATCAGCGGTGATGTTCAT
TTTGGAGAAATTTCTCGTTATGACTGTGGAGCTCAATATCCATTGTATGATATTACCTCA
AGTGGTCTTACCCAATCTGTTGAGAATTCCGTGCCATCAGTATTTCAACCACTTATGAGA
CTTGTGGCTTTGTTGACACCAACTACCTTGCGAGTCTTTAGCCCTAACTGTCGTTACAAA
TCATGCACATATGGTCAACCAAACTTTGGAGCAATCGAAATAGATTGGAATGCAGTGCCT
CCCCAGATTAAACTCGAACTAAGAGATGTAGAGGGAAACTCTGTTGGTGGTGTGGAGTTT
CCTATATCTGAACTGGATCCATCAAAAGCACATGCCATTACAAAACAAGGGCATTCGTAC
CAACGGCATTGCGCTCTCGAAACAGAGCTTCCATGGCTAGTGTGGCACCGTCTTGCTCTG
TTGTTGTTTGGTACAATTGCTGTTCTTGTCATAGCCGTGGTGTTGCTAGGAATTACCTGC
TTATCAGCTGCTAATATTTTCACCAAGAAATCCAAGATGGAATAG

Peptide Sequence

PEP ID

Os02t0592200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:22911011:22915632:-1 gene:Os02g0592200 transcript:Os02t0592200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to alkaline phosphatase D. (Os02t0592200-01)
Sequence

MATSTRALLLLPLLLLFLLSRSLSLRADPGAAVSRIAFGSCANQSAPQPVWEAVVGFDPQ
VFIWLGDNVYGDNKRPFRVFGRERTVGPWRNVPRFYPSTEAELRRRYEMAKAKPGYAKLR
ERAQVIGTWDDHDYGLNDAGKEFGGKVTSQRLLLDFLDEAEDSSRRQQAGVYASYMFGPE
GKRVKVILLDTRYHRDPLSSDGAVLGDPQWQWLERELHGPRSEITIIGSSIQVISNLSAT
TGPLFYVESWARFPRERERLFRLIDSSKRNGVFFISGDVHFGEISRYDCGAQYPLYDITS
SGLTQSVENSVPSVFQPLMRLVALLTPTTLRVFSPNCRYKSCTYGQPNFGAIEIDWNAVP
PQIKLELRDVEGNSVGGVEFPISELDPSKAHAITKQGHSYQRHCALETELPWLVWHRLAL
LLFGTIAVLVIAVVLLGITCLSAANIFTKKSKME

Transcript Sequence

Transcript ID

Os02t0592200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22911011:22915632:-1 gene:Os02g0592200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to alkaline phosphatase D. (Os02t0592200-01)
Sequence

CGCCCGCCCGCCTCCGCCTCCGCCAATGGCGACCTCCACGCGGGCGTTGCTCCTCCTCCC
CCTCCTCCTCCTCTTCCTCCTCTCCCGCTCCCTCTCCCTCCGCGCCGATCCCGGCGCCGC
CGTGTCCAGGATCGCCTTCGGCTCCTGCGCCAACCAGAGCGCGCCCCAGCCCGTGTGGGA
GGCCGTCGTGGGGTTCGACCCGCAGGTGTTCATCTGGCTCGGGGACAACGTGTACGGCGA
CAACAAGAGGCCGTTCCGGGTGTTCGGGAGGGAGAGGACGGTGGGGCCGTGGAGGAACGT
GCCGCGGTTCTACCCGTCGACGGAGGCCGAGCTGCGGAGGCGCTACGAGATGGCCAAGGC
CAAGCCCGGGTACGCCAAGCTCAGGGAGAGGGCTCAGGTTATTGGAACATGGGATGATCA
CGATTATGGACTGAATGATGCAGGAAAAGAGTTTGGTGGGAAGGTGACCTCTCAAAGGCT
TCTATTAGATTTTCTGGATGAAGCTGAAGATAGTTCACGGAGGCAGCAAGCTGGTGTTTA
TGCCTCCTACATGTTTGGCCCTGAAGGAAAACGGGTAAAGGTAATTCTGTTGGACACCAG
ATATCACAGAGACCCTCTATCAAGTGATGGAGCTGTACTGGGAGATCCTCAGTGGCAATG
GCTGGAGAGGGAACTGCATGGTCCTCGATCAGAGATCACCATCATTGGATCTTCAATACA
AGTAATATCAAATCTATCTGCCACCACTGGACCTTTGTTCTATGTGGAGTCATGGGCACG
CTTTCCAAGGGAAAGAGAACGACTGTTCAGACTGATCGATAGCAGTAAGAGAAATGGAGT
GTTTTTTATCAGCGGTGATGTTCATTTTGGAGAAATTTCTCGTTATGACTGTGGAGCTCA
ATATCCATTGTATGATATTACCTCAAGTGGTCTTACCCAATCTGTTGAGAATTCCGTGCC
ATCAGTATTTCAACCACTTATGAGACTTGTGGCTTTGTTGACACCAACTACCTTGCGAGT
CTTTAGCCCTAACTGTCGTTACAAATCATGCACATATGGTCAACCAAACTTTGGAGCAAT
CGAAATAGATTGGAATGCAGTGCCTCCCCAGATTAAACTCGAACTAAGAGATGTAGAGGG
AAACTCTGTTGGTGGTGTGGAGTTTCCTATATCTGAACTGGATCCATCAAAAGCACATGC
CATTACAAAACAAGGGCATTCGTACCAACGGCATTGCGCTCTCGAAACAGAGCTTCCATG
GCTAGTGTGGCACCGTCTTGCTCTGTTGTTGTTTGGTACAATTGCTGTTCTTGTCATAGC
CGTGGTGTTGCTAGGAATTACCTGCTTATCAGCTGCTAATATTTTCACCAAGAAATCCAA
GATGGAATAGCCATAAGGTACAGAGGACAGAAGCAGACACTTCAGTCTAACTACAGATGG
AAAAGCTGATCACACCGTCCATGGACGTTCCAGTGCCTAGAACAACCATGAGATTTCAAT
ACCAATATAACCCATTGCGCAGCCTGTTACGCATCACAAGTTTTATGAATGTAACTAACA
ATCTGTATACGTGTATAGCATGTTTAGAAATTTCTCATGTCAATTTCGTTGCTTTATGGT
GAATAGGATGACTGTTGTCTATTCTCTGACCCCTCTTACATCATTGAAGTAGGCTCCGTT
TGAACATGCATCTGTTTCTGTTTGAACATTGAAGATCATTCGTTTTGTCCGTTT