Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0592000-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:22900707:22910523:-1 gene:Os02g0592000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0106G07.8 protein. (Os02t0592000-00)
Sequence

ATGGCGGCGAAGATCCCGGTGATCGACCTGCGGCTCGCCGGCGAGGCGCCCGGCGAGGCC
GCGCGGCTGCGCGACGCGGCGCGGCGCCTGGGCTGCTTCCGCGTGTCGGGCCACGGCGTG
CCGCGGGAGCTCCAGGCCGGCATGAGGGCCGCCGTGCGCGCCCTGTTCGACCTCCCCGGC
GACGCCAAGCGCCGCAACGCCGACGTCATCCACGGCAGCGGCTACATGGCGCCGAGCGCC
GCCAACCCGCTGTACGAGGCGTTCGGCCTCTACGACGCCGCGTCCCCCGCCGACGTCGAC
GCCTTCTGTTCCTGCCTCGACGCGCCGCCGCACGCCAGGGAGGCCATCAGGAGCTACGCC
GAGAAGGCGCACGAGCTGGTCGTGGACGTCGCGGCGAAGCTGGCCACGAGCCTCGGCCTG
GACTGCTCGTTCGGCGACTGGCCGTGCCAATTCCGTATCAACAGGTACAACTACACGCCG
GACACCGTGGGGAAGACCGGCGTGCAGGTCCACACGGACTCCGGCTTCCTCACCGTGCTC
CAGGAGGACGACCGCGTTGGCGGCCTCGAGGTCGCCGACCCGGACACCGGCGAGTTCGCG
CCCGTCGACCCCCTCCCCGGCACGTTCCTCGTCAACCTCGGCGACGTCGCCACGGCGTGG
AGCAACGGGGAGCTGCACAACGTGAGGCACCGCGTTCGGTGCGTGGCGGGGGTGCAGCGC
GTCTCCATCGCGCTCTTCCTGCTGGCGCCCAAGGACGACGTGGTGCGCGCGCCGGAGGCG
TTCGTGAGCGCCGAGCGGCCGCGCCGGTTCAGGGATTTCGGCTACGACGACTACCGGCGG
CTCAGGCAGTCCACCGGGGAGCACGCCGGCGAAGCCCTCGCGCGATTAGCCGCATGA

Peptide Sequence

PEP ID

Os02t0592000-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:22900707:22910523:-1 gene:Os02g0592000 transcript:Os02t0592000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0106G07.8 protein. (Os02t0592000-00)
Sequence

MAAKIPVIDLRLAGEAPGEAARLRDAARRLGCFRVSGHGVPRELQAGMRAAVRALFDLPG
DAKRRNADVIHGSGYMAPSAANPLYEAFGLYDAASPADVDAFCSCLDAPPHAREAIRSYA
EKAHELVVDVAAKLATSLGLDCSFGDWPCQFRINRYNYTPDTVGKTGVQVHTDSGFLTVL
QEDDRVGGLEVADPDTGEFAPVDPLPGTFLVNLGDVATAWSNGELHNVRHRVRCVAGVQR
VSIALFLLAPKDDVVRAPEAFVSAERPRRFRDFGYDDYRRLRQSTGEHAGEALARLAA

Transcript Sequence

Transcript ID

Os02t0592000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22900707:22910523:-1 gene:Os02g0592000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0106G07.8 protein. (Os02t0592000-00)
Sequence

GCAGGGCCGTATGGCGGCGAAGATCCCGGTGATCGACCTGCGGCTCGCCGGCGAGGCGCC
CGGCGAGGCCGCGCGGCTGCGCGACGCGGCGCGGCGCCTGGGCTGCTTCCGCGTGTCGGG
CCACGGCGTGCCGCGGGAGCTCCAGGCCGGCATGAGGGCCGCCGTGCGCGCCCTGTTCGA
CCTCCCCGGCGACGCCAAGCGCCGCAACGCCGACGTCATCCACGGCAGCGGCTACATGGC
GCCGAGCGCCGCCAACCCGCTGTACGAGGCGTTCGGCCTCTACGACGCCGCGTCCCCCGC
CGACGTCGACGCCTTCTGTTCCTGCCTCGACGCGCCGCCGCACGCCAGGGAGGCCATCAG
GAGCTACGCCGAGAAGGCGCACGAGCTGGTCGTGGACGTCGCGGCGAAGCTGGCCACGAG
CCTCGGCCTGGACTGCTCGTTCGGCGACTGGCCGTGCCAATTCCGTATCAACAGGTACAA
CTACACGCCGGACACCGTGGGGAAGACCGGCGTGCAGGTCCACACGGACTCCGGCTTCCT
CACCGTGCTCCAGGAGGACGACCGCGTTGGCGGCCTCGAGGTCGCCGACCCGGACACCGG
CGAGTTCGCGCCCGTCGACCCCCTCCCCGGCACGTTCCTCGTCAACCTCGGCGACGTCGC
CACGGCGTGGAGCAACGGGGAGCTGCACAACGTGAGGCACCGCGTTCGGTGCGTGGCGGG
GGTGCAGCGCGTCTCCATCGCGCTCTTCCTGCTGGCGCCCAAGGACGACGTGGTGCGCGC
GCCGGAGGCGTTCGTGAGCGCCGAGCGGCCGCGCCGGTTCAGGGATTTCGGCTACGACGA
CTACCGGCGGCTCAGGCAGTCCACCGGGGAGCACGCCGGCGAAGCCCTCGCGCGATTAGC
CGCATGATGCAGT